RNA–Protein interactions for RNA: ENSMUST00000055006.11

Trim16-201, Transcript of Tripartite motif-containing protein 16, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim16, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16-201ENSMUST00000055006 Ttc13A0A1L1SSC7 844 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 VimP20152 466 aaKnown RBP8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Trim43aQ3TL54 445 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Specc1Q5SXY1 1067 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 EregQ61521 162 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Mindy1Q76LS9 468 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Pak2Q8CIN4 524 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Ifih1Q8R5F7 1025 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Krt79Q8VED5 531 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Abcf2Q99LE6 628 aaKnown RBP8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Ascc1Q9D8Z1 356 aaKnown RBP8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Ano3A2AHL1 981 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Fkbp1aP26883 108 aaKnown RBP8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Tmod1P49813 359 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Erich4Q3UNU4 136 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Rnpc3Q3UZ01 514 aaKnown RBP8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 AcrbpQ3V140 540 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Slc9b1Q8C0X2 565 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Lmbrd1Q8K0B2 537 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Mmgt1Q8K273 131 aaKnown RBP8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Klhl20Q8VCK5 604 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 4930550L24RikQ99PA7 320 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 UvssaQ9D479 717 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Eef1gQ9D8N0 437 aaKnown RBP8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Angptl3Q9R182 455 aa8.61□□□□□ -1.03
Trim16-201ENSMUST00000055006 Ubr2Q6WKZ8 1755 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 PurbO35295 324 aaKnown RBP8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Gdap1O88741 358 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Ctnnd1P30999 938 aaKnown RBP8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 PltpP55065 493 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Arhgap44Q5SSM3 814 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 EsrrbQ61539 433 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Wdr44Q6NVE8 915 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Sdccag8Q80UF4 717 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 LRWD1Q8BUI3 648 aaKnown RBP8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Q8BWG4 1187 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 VillQ91YD6 859 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Arfgap2Q99K28 520 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Mad2l2Q9D752 211 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Serpinb12Q9D7P9 423 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Pcdh11xF6ZNL5 1338 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Zfp408H7BX78 710 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Gna11P21278 359 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Ap1m1P35585 423 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Scg2Q03517 617 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Znf667Q2TL60 609 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Nlrx1Q3TL44 975 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Lrrc55Q3UY51 311 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Tlr13Q6R5N8 991 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Lsm14bQ8CGC4 385 aaKnown RBP8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Trap1Q9CQN1 706 aaKnown RBP8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Saal1Q9D2C2 474 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Tmem47Q9JJG6 181 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Tnks1bp1P58871 1720 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Gm45208A0A140LJ36 292 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Lrrc32G3XA59 663 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Hnrnph1O35737 449 aaKnown RBP8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 XlrP05531 208 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Hsd17b1P51656 344 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Hnrnph2P70333 449 aaKnown RBP8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Fnbp1Q80TY0 616 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Haus1Q8BHX1 278 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Amigo3Q8C2S7 508 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Prl7b1Q8CGZ9 251 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Sde2Q8K1J5 448 aaKnown RBP8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Lgi2Q8K4Z0 550 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Dhx58Q99J87 678 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Ccdc89Q9DA73 370 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Arl6ip4Q9JM93 229 aa8.6□□□□□ -1.03
Trim16-201ENSMUST00000055006 Col22a1E9Q7P1 1613 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Tiam2Q6ZPF3 1715 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Alppl2P24823 529 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 VrtnQ3SYK4 740 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Trip13Q3UA06 432 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Ccdc33Q3ULW6 985 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Tmtc1Q3UV71 942 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Naa35Q6PHQ8 725 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Ddx10Q80Y44 875 aaKnown RBP8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Bsdc1Q80Y55 427 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Ube2sQ921J4 223 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Haus2Q9CQS9 234 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Q9D5Q8 446 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Capn9Q9D805 690 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 March8Q9DBD2 286 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Vmn2r71L7N2D8 855 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Tnnc1P19123 161 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Akr1b1P45376 316 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Rps8P62242 208 aaKnown RBP8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Pacsin1Q61644 441 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Camsap3Q80VC9 1252 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Zbed4Q80WQ9 1168 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 HhatQ8BMT9 499 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Csgalnact2Q8C1F4 542 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Alg1Q921Q3 482 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Lztr1Q9CQ33 837 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Ccnt1Q9QWV9 724 aaKnown RBP8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Sept3Q9Z1S5 350 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 GsdmeQ9Z2D3 512 aa8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 AfdnQ9QZQ1 1820 aaKnown RBP8.59□□□□□ -1.03
Trim16-201ENSMUST00000055006 Zfp174B9EJW5 407 aa8.59□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms