RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Fermt2Q8CIB5 680 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Q8R1Y2 203 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ddx47Q9CWX9 455 aaKnown RBP11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 RabggtaQ9JHK4 567 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Nfu1Q9QZ23 255 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 4932429P05RikA2ADI4 785 aa11.71□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cyp2d10P24456 504 aa11.71□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Dab2P98078 766 aa11.71□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Mettl14Q3UIK4 456 aa11.71□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Tubb2aQ7TMM9 445 aa11.71□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Tubb2bQ9CWF2 445 aa11.71□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Zcchc8Q9CYA6 709 aaKnown RBP11.71□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Pex11aQ9Z211 246 aa11.71□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Myo1aO88329 1043 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cyth2P63034 400 aaKnown RBP11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Smad1P70340 465 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Nkx2-3P97334 362 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Hipk4Q3V016 616 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Spa17Q62252 149 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Maip1Q8BHE8 291 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Olfm5Q8BU90 496 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Lrrc59Q922Q8 307 aaKnown RBP11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 CutaQ9CQ89 177 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Capn9Q9D805 690 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 FocadA2AKG8 1798 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Krt78E9Q0F0 1068 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Depdc1bQ8BH88 529 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Psmd2Q8VDM4 908 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 IydQ9DCX8 285 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Fmnl1Q9JL26 1094 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Tns2Q8CGB6 1400 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Erich2E9Q1A6 463 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ap1b1O35643 943 aaKnown RBP11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Tsr1Q5SWD9 803 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Fhod1Q6P9Q4 1197 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Rexo1Q7TT28 1213 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Lmbrd1Q8K0B2 537 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Slc26a7Q8R2Z3 656 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 RpgrQ9R0X5 1001 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Foxo3Q9WVH4 672 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Sik3Q6P4S6 1311 aa11.7□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Izumo3A6PWV3 263 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Etnk2A7MCT6 385 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Epb41l2O70318 988 aaKnown RBP11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Becn2P0DM65 447 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cpa1Q7TPZ8 419 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ints8Q80V86 995 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Prkag3Q8BGM7 489 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Q8BWG4 1187 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Fam161bQ8CB59 589 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Kiaa1024Q8K3V7 917 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ssfa2Q922B9 1252 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cd2apQ9JLQ0 637 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 GgcxQ9QYC7 757 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Nme9A0A1L1SUL6 329 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Stmn2P55821 179 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Asap2Q7SIG6 958 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Vps52Q8C754 723 aaKnown RBP11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Vcpip1Q8CDG3 1220 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Snrnp27Q8K194 155 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gimap7Q8R379 293 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Rwdd2aQ9D9S3 292 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Xrcc5P27641 732 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Terf1P70371 421 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ddx3yQ62095 658 aaKnown RBP11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 PnocQ64387 187 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Iqcb1Q8BP00 598 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 E330017A01RikQ8BU47 192 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ctage5Q8R311 779 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gbp7Q91Z40 638 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Frmd4bQ920B0 1035 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gimap4Q99JY3 219 aa11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Hyou1Q9JKR6 999 aaKnown RBP11.69□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gm2030D3Z7C4 212 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gm38392E9Q2A2 434 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Eef1bO70251 225 aaKnown RBP11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 ClgnP52194 611 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Sap30bpQ02614 308 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ppp1r13lQ5I1X5 824 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Meis1Q60954 390 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Vil1Q62468 827 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gimap8Q75N62 688 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Stambpl1Q76N33 436 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 LnpkQ7TQ95 425 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Tmem87aQ8BXN9 555 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Tmem119Q8R138 280 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Golga1Q9CW79 758 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Rasal2E9PW37 1286 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Prl3d2F6R3P9 224 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 HpdP49429 393 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Foxp1P58462 705 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Pald1P70261 859 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Rhpn1Q61085 643 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Tmem59lQ7TNI2 337 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Rsad2Q8CBB9 362 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Klhl34A2AI76 644 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Slc10a4Q3UEZ8 437 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Celf4Q7TSY6 486 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ankzf1Q80UU1 748 aaKnown RBP11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Dclk3Q8BWQ5 790 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms