RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 AvenQ9D9K3 342 aa18.19■□□□□ 0.5
Col17a1-201ENSMUST00000026045 CflarO35732 481 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Apol7eQ3UZ24 369 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Ankzf1Q80UU1 748 aaKnown RBP18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Vipas39Q8BGQ1 491 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 GlmnQ8BZM1 596 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Tmem191cQ9JJB1 302 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 TnrQ8BYI9 1358 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Apba1B2RUJ5 842 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Pcdhb9E9Q5G2 828 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Gm4340L7N2C4 268 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Slc27a3O88561 667 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Fnbp1Q80TY0 616 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Stn1Q8K2X3 378 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Ifih1Q8R5F7 1025 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Frmd4bQ920B0 1035 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Znf830Q8R1N0 363 aaKnown RBP18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Ctnna3Q65CL1 895 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Ctdspl2Q8BG15 465 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Zfp449Q8CB76 518 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 FliiQ9JJ28 1271 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Pard3Q99NH2 1333 aa18.18■□□□□ 0.5
Col17a1-201ENSMUST00000026045 PhbP67778 272 aaKnown RBP18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Ap5z1Q3U829 807 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Armc2Q3URY6 854 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Large2Q5XPT3 690 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Zbtb17Q60821 794 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Q9CR55 154 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Arhgap6O54834 987 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Parp1P11103 1013 aaKnown RBP18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Ccdc129Q14B48 1034 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Pcdha12Q91Y18 950 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Hps4Q99KG7 671 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 1700013D24RikQ0P521 120 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Prr18Q6PAN7 307 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Naa35Q6PHQ8 725 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Zbtb41Q811F1 908 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Sept2P42208 361 aaKnown RBP18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Kif22Q3V300 660 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Cwf19l2Q8BG79 887 aaKnown RBP18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Adgrb3Q80ZF8 1522 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Tcp11x2A2AEI7 503 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Aldh5a1Q8BWF0 523 aa18.17■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Cdk12Q14AX6 1484 aaKnown RBP18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Zbtb7aO88939 569 aaKnown RBP18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Slc27a1Q60714 646 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Ccdc189Q6NZQ0 333 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Ppp2r2aQ6P1F6 447 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Adcy8P97490 1249 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Pde1bQ01065 535 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Trim56Q80VI1 734 aaKnown RBP18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Trim52Q8CDV4 233 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Gm43638A0A0J9YU36 694 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Gm5580A0A0N4SVP8 411 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Gimap9G3X987 291 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Zbtb1Q91VL9 713 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 PtpruB1AUH1 1446 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Mmrn2A6H6E2 943 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Eef2kO08796 724 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Lrrc6O88978 473 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Inf2Q0GNC1 1273 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Ripor2Q80U16 1078 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Plcb4Q91UZ1 1175 aa18.16■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Art2bO35975 289 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Rhpn1Q61085 643 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Wdr91Q7TMQ7 748 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Usp33Q8R5K2 909 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Gm32742A0A1B0GT42 1604 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Gm4758L7N258 96 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Traf5P70191 558 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Fam81aQ3UXZ6 364 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 PapolaQ61183 739 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Ankrd6Q69ZU8 712 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Kirrel3Q8BR86 778 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Emilin1Q99K41 1017 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Dbn1Q9QXS6 706 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Iqgap1Q9JKF1 1657 aaKnown RBP18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Casq2O09161 415 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Q3TYL0 343 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Herc4Q6PAV2 1057 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 L3mbtl3Q8BLB7 883 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Rhobtb1Q9DAK3 695 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Gemin5Q8BX17 1502 aaKnown RBP18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 PcQ05920 1178 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Dab2ipQ3UHC7 1189 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Fbxw10Q5SUS0 1030 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Tom1l1Q923U0 474 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Dach1Q9QYB2 751 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Suclg2Q9Z2I8 433 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Col20a1Q923P0 1320 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Cyp3a57D3YYZ0 503 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Gm5168Q4KL04 211 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 IydQ9DCX8 285 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Homer2Q9QWW1 354 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Azi2Q9QYP6 405 aa18.15■□□□□ 0.5
Col17a1-201ENSMUST00000026045 Gnat1P20612 350 aa18.14■□□□□ 0.49
Col17a1-201ENSMUST00000026045 MagohP61327 146 aaKnown RBP18.14■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Pnma5Q5DTT8 618 aa18.14■□□□□ 0.49
Col17a1-201ENSMUST00000026045 Bsdc1Q80Y55 427 aa18.14■□□□□ 0.49
Col17a1-201ENSMUST00000026045 MagohbQ9CQL1 146 aa18.14■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms