RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Hspa1lP16627 641 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Pdrg1P59048 133 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Asic3Q6X1Y6 530 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Knop1Q9Z2Q2 478 aaKnown RBP16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 1700003F12RikA2AKE5 210 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Snx12O70493 165 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Fdx1P46656 188 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Pafah1b1P63005 410 aaKnown RBP16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Evi5P97366 809 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ccdc34Q3UI66 367 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Pnma5Q5DTT8 618 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Sumf1Q8R0F3 372 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Tmem191cQ9JJB1 302 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 PtgdrP70263 357 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Arglu1Q3UL36 271 aaKnown RBP16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Tm4sf1Q64302 202 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 MypopQ8R4U1 393 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ifih1Q8R5F7 1025 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 NeblQ0II04 452 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Antxr2Q6DFX2 487 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Zc3h6Q8BYK8 1177 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Gpcpd1Q8C0L9 675 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ttll1Q91V51 423 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 EpgnQ924X1 152 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Saal1Q9D2C2 474 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Eef1gQ9D8N0 437 aaKnown RBP16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Klra17Q9JMA4 273 aa16.72■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Map7d1A2AJI0 846 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Wdhd1P59328 1117 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Tmtc1Q3UV71 942 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Kctd1Q5M956 257 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Hirip3Q8BLH7 601 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Rcor2Q8C796 523 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Plagl2Q925T4 496 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Psma7Q9Z2U0 248 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Foxn2E9Q7L6 429 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Adam7O35227 789 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Setd4P58467 439 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 MpndQ3TV65 487 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ccdc189Q6NZQ0 333 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Cc2d1bQ8BRN9 848 aa16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Syf2Q9D198 242 aaKnown RBP16.71■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 ErmardE9Q048 622 aa16.71■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Lrrc6O88978 473 aa16.71■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Mx1P09922 631 aa16.71■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Klhdc9Q3USL1 350 aa16.71■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Trpc6Q61143 930 aa16.71■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 FntaQ61239 377 aa16.71■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Best3Q6H1V1 669 aa16.71■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Ccdc96Q9CR92 584 aa16.71■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Zbed3Q9D0L1 228 aa16.71■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 ToporslQ9D2F8 683 aa16.71■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Col11a2Q64739 1736 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Ubr3Q5U430 1889 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Scn9aQ62205 1984 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Apol6B7ZC55 329 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Capza3P70190 299 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Sec31aQ3UPL0 1230 aaKnown RBP16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Fam196bQ6GQV1 535 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 RragaQ80X95 313 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Cdk17Q8K0D0 523 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Ces1Q8VCC2 565 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Copb2O55029 905 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Nedd4P46935 887 aaKnown RBP16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 EregQ61521 162 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Mettl25Q6NXH8 597 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Stac3Q8BZ71 360 aa16.7■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Magea10A2AMW4 325 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Gfpt1P47856 697 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Tubb5P99024 444 aaKnown RBP16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Shc3Q61120 474 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Nek5Q7TSC3 627 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Armcx3Q8BHS6 379 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Vmn1r218Q8R261 298 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Eif4a3Q91VC3 411 aaKnown RBP16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Cul5Q9D5V5 780 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 ThegQ9JMB1 375 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Gm11983V9GXS8 105 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Arhgap4B1AUY3 965 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Lig1P37913 916 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Atp8b1Q148W0 1251 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Pcsk7Q61139 770 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 GnptabQ69ZN6 1235 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Ankrd24Q80VM7 985 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Znf18Q810A1 556 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Rpf2Q9JJ80 306 aaKnown RBP16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Pstpip1P97814 415 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Znf827Q505G8 1078 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Cep70Q6IQY5 616 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Hook2Q7TMK6 716 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Haus4Q8BFT2 363 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Thap3Q8BJ25 218 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Kif2bQ8C0N1 668 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Ppp1r11Q8K1L5 131 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 FignQ9ERZ6 759 aa16.69■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Hnrnph3D3Z3N4 346 aaKnown RBP16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Sema6bO54951 886 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 GalcP54818 684 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Fhdc1Q3ULZ2 1149 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 1810065E05RikQ5NC41 235 aa16.68■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms