RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Dock2Q8C3J5 1828 aa22.74■■□□□ 1.23
Trim47-201ENSMUST00000021120 Cyp7b1Q60991 507 aa22.74■■□□□ 1.23
Trim47-201ENSMUST00000021120 Ovgp1Q62010 721 aa22.74■■□□□ 1.23
Trim47-201ENSMUST00000021120 Brd2Q7JJ13 798 aaKnown RBP22.74■■□□□ 1.23
Trim47-201ENSMUST00000021120 Ireb2Q811J3 963 aaKnown RBP22.74■■□□□ 1.23
Trim47-201ENSMUST00000021120 LRWD1Q8BUI3 648 aaKnown RBP22.74■■□□□ 1.23
Trim47-201ENSMUST00000021120 Usp14Q9JMA1 493 aaKnown RBP22.74■■□□□ 1.23
Trim47-201ENSMUST00000021120 Pbx1P41778 430 aa22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Atp13a3Q5XF89 1219 aa22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Ctdspl2Q8BG15 465 aa22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Depdc1aQ8CIG0 804 aa22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Polr2dQ9D7M8 142 aaKnown RBP22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Gm3409A0A0G2JE67 319 aa22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Slc4a9E9PUP3 929 aa22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Gm10134F6ZQC6 126 aa22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 MarcksP26645 309 aaKnown RBP22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Tubb2aQ7TMM9 445 aa22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Dlg1Q811D0 905 aaKnown RBP22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Cdc23Q8BGZ4 597 aa22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 MslnlQ8C160 685 aa22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Tubb2bQ9CWF2 445 aa22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 Pdcd6ipQ9WU78 869 aaKnown RBP22.73■■□□□ 1.23
Trim47-201ENSMUST00000021120 DSCC1Q14AI0 399 aa22.72■■□□□ 1.23
Trim47-201ENSMUST00000021120 Ptger2Q62053 362 aa22.72■■□□□ 1.23
Trim47-201ENSMUST00000021120 Pde5aQ8CG03 865 aa22.72■■□□□ 1.23
Trim47-201ENSMUST00000021120 Pspc1Q8R326 523 aaKnown RBP22.72■■□□□ 1.23
Trim47-201ENSMUST00000021120 Mrps25Q9D125 171 aaKnown RBP22.72■■□□□ 1.23
Trim47-201ENSMUST00000021120 Cyp26c1B2RXA7 518 aa22.72■■□□□ 1.23
Trim47-201ENSMUST00000021120 Il13ra2O88786 383 aa22.72■■□□□ 1.23
Trim47-201ENSMUST00000021120 Mex3cQ05A36 652 aaKnown RBP22.72■■□□□ 1.23
Trim47-201ENSMUST00000021120 Q66JV7 365 aa22.72■■□□□ 1.23
Trim47-201ENSMUST00000021120 Fbxo28Q8BIG4 368 aa22.72■■□□□ 1.23
Trim47-201ENSMUST00000021120 Sulf1Q8K007 870 aa22.72■■□□□ 1.23
Trim47-201ENSMUST00000021120 Scn3aA2ASI5 1947 aa22.71■■□□□ 1.23
Trim47-201ENSMUST00000021120 Klra1P20937 262 aa22.71■■□□□ 1.23
Trim47-201ENSMUST00000021120 Tubb4bP68372 445 aaKnown RBP22.71■■□□□ 1.23
Trim47-201ENSMUST00000021120 Gjb4Q02738 266 aa22.71■■□□□ 1.23
Trim47-201ENSMUST00000021120 Atp8b1Q148W0 1251 aa22.71■■□□□ 1.23
Trim47-201ENSMUST00000021120 Znf771Q8BJ90 317 aa22.71■■□□□ 1.23
Trim47-201ENSMUST00000021120 Slc4a8Q8JZR6 1089 aa22.71■■□□□ 1.23
Trim47-201ENSMUST00000021120 4921524L21RikQ9D5T2 438 aa22.71■■□□□ 1.23
Trim47-201ENSMUST00000021120 Ifi202Q9R002 445 aa22.71■■□□□ 1.23
Trim47-201ENSMUST00000021120 Api5O35841 504 aaKnown RBP22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Sdc2P43407 202 aa22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Rad23aP54726 363 aa22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Pls1Q3V0K9 630 aa22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Lamb3Q61087 1168 aa22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Slc9a1Q61165 820 aa22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Fhod1Q6P9Q4 1197 aa22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Fbxo11Q7TPD1 930 aaKnown RBP22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Morc2bQ8C5W4 1022 aa22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Slc5a5Q99PN0 618 aa22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Myo1hQ9D6A1 958 aa22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Nr2e3Q9QXZ7 395 aa22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 S1pr4Q9Z0L1 386 aa22.7■■□□□ 1.23
Trim47-201ENSMUST00000021120 Zfp853A0A1D5RM95 733 aa22.7■■□□□ 1.22
Trim47-201ENSMUST00000021120 Gucy1a2F8VQK3 730 aa22.7■■□□□ 1.22
Trim47-201ENSMUST00000021120 Ift88Q61371 824 aa22.7■■□□□ 1.22
Trim47-201ENSMUST00000021120 Peg10Q7TN75 958 aaKnown RBP22.7■■□□□ 1.22
Trim47-201ENSMUST00000021120 Smc2Q8CG48 1191 aaKnown RBP22.7■■□□□ 1.22
Trim47-201ENSMUST00000021120 Tdrd3Q91W18 743 aaKnown RBP22.7■■□□□ 1.22
Trim47-201ENSMUST00000021120 Prc1Q99K43 603 aaKnown RBP22.7■■□□□ 1.22
Trim47-201ENSMUST00000021120 Krt23Q99PS0 422 aa22.7■■□□□ 1.22
Trim47-201ENSMUST00000021120 Mrpl11Q9CQF0 192 aaKnown RBP22.7■■□□□ 1.22
Trim47-201ENSMUST00000021120 Usp17ldG5E8G2 545 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Usp17lcG5E8I7 545 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Sox5P35710 763 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Cdr2P97817 455 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Znhit6Q3UFB2 460 aaKnown RBP22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Adgre1Q61549 931 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Dcaf15Q6PFH3 600 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Larp6Q8BN59 492 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Gprasp2Q8BUY8 826 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Q8C1R3 189 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Hgh1Q8C3I8 393 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Tube1Q9D6T1 475 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Mms22lB1AUR6 1238 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Exoc3l2D3YUP5 789 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Phldb3E9QAF4 648 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Tmem132bF7BAB2 1078 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Ankrd40Q5SUE8 363 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Kiaa1024Q8K3V7 917 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Cul5Q9D5V5 780 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 GdaQ9R111 454 aa22.69■■□□□ 1.22
Trim47-201ENSMUST00000021120 Cyp2e1Q05421 493 aa22.68■■□□□ 1.22
Trim47-201ENSMUST00000021120 Adck2Q6NSR3 617 aa22.68■■□□□ 1.22
Trim47-201ENSMUST00000021120 Bri3bpQ8BXV2 253 aa22.68■■□□□ 1.22
Trim47-201ENSMUST00000021120 Zhx2Q8C0C0 836 aaKnown RBP22.68■■□□□ 1.22
Trim47-201ENSMUST00000021120 Vps53Q8CCB4 832 aa22.68■■□□□ 1.22
Trim47-201ENSMUST00000021120 Card14Q99KF0 999 aa22.68■■□□□ 1.22
Trim47-201ENSMUST00000021120 PdclQ9DBX2 301 aa22.68■■□□□ 1.22
Trim47-201ENSMUST00000021120 Tjp3Q9QXY1 905 aa22.68■■□□□ 1.22
Trim47-201ENSMUST00000021120 Brca1P48754 1812 aa22.68■■□□□ 1.22
Trim47-201ENSMUST00000021120 Cul4bA2A432 970 aaKnown RBP22.67■■□□□ 1.22
Trim47-201ENSMUST00000021120 Flot1O08917 428 aa22.67■■□□□ 1.22
Trim47-201ENSMUST00000021120 Rad51bO35719 350 aa22.67■■□□□ 1.22
Trim47-201ENSMUST00000021120 Trappc10Q3TLI0 1259 aa22.67■■□□□ 1.22
Trim47-201ENSMUST00000021120 Ift122Q6NWV3 1182 aa22.67■■□□□ 1.22
Trim47-201ENSMUST00000021120 Trpv1Q704Y3 839 aa22.67■■□□□ 1.22
Trim47-201ENSMUST00000021120 Tmem60Q8K174 133 aa22.67■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms