RNA–Protein interactions for RNA: tT(CGU)K

TRT2, Transcript of Threonine tRNA (tRNA-Thr), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRT2, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRT2tT(CGU)K RCM1P53972 490 aa12.19□□□□□ -0.46
TRT2tT(CGU)K YNR029CP53729 429 aaKnown RBP12.18□□□□□ -0.46
TRT2tT(CGU)K PSK1P31374 1356 aa12.18□□□□□ -0.46
TRT2tT(CGU)K NST1P53935 1240 aa12.16□□□□□ -0.46
TRT2tT(CGU)K YML133CQ03099 1374 aa12.14□□□□□ -0.47
TRT2tT(CGU)K YLL067CQ07888 1374 aa12.14□□□□□ -0.47
TRT2tT(CGU)K YLL066CQ99208 1374 aa12.14□□□□□ -0.47
TRT2tT(CGU)K PPH3P32345 308 aa12.13□□□□□ -0.47
TRT2tT(CGU)K YMR196WQ04336 1088 aa12.12□□□□□ -0.47
TRT2tT(CGU)K CPS1P27614 576 aa12.11□□□□□ -0.47
TRT2tT(CGU)K MIF2P35201 549 aa12.08□□□□□ -0.48
TRT2tT(CGU)K LEU2P04173 364 aaPredicted RBP12.05□□□□□ -0.48
TRT2tT(CGU)K PRS1P32895 427 aaKnown RBP12.04□□□□□ -0.48
TRT2tT(CGU)K THI12P42883 340 aa12.04□□□□□ -0.48
TRT2tT(CGU)K THI5P43534 340 aa12.04□□□□□ -0.48
TRT2tT(CGU)K THI11P47183 340 aa12.04□□□□□ -0.48
TRT2tT(CGU)K THI13Q07748 340 aa12.04□□□□□ -0.48
TRT2tT(CGU)K MTR4P47047 1073 aaKnown RBP12.03□□□□□ -0.48
TRT2tT(CGU)K YEF3P16521 1044 aaKnown RBP12.02□□□□□ -0.49
TRT2tT(CGU)K SNF2P22082 1703 aa12.01□□□□□ -0.49
TRT2tT(CGU)K TRK1P12685 1235 aa12.01□□□□□ -0.49
TRT2tT(CGU)K PDI1P17967 522 aaKnown RBP12.01□□□□□ -0.49
TRT2tT(CGU)K TY4B-HP0C2J7 1802 aa12□□□□□ -0.49
TRT2tT(CGU)K TY4B-JP47024 1803 aa12□□□□□ -0.49
TRT2tT(CGU)K ADE6P38972 1358 aaKnown RBP12□□□□□ -0.49
TRT2tT(CGU)K IOC4Q04213 475 aa11.98□□□□□ -0.49
TRT2tT(CGU)K TAP42Q04372 366 aa11.98□□□□□ -0.49
TRT2tT(CGU)K KAR2P16474 682 aaKnown RBP11.97□□□□□ -0.49
TRT2tT(CGU)K RTF1P53064 558 aa11.97□□□□□ -0.49
TRT2tT(CGU)K RPP0P05317 312 aaKnown RBP11.94□□□□□ -0.5
TRT2tT(CGU)K GRX4P32642 244 aa11.94□□□□□ -0.5
TRT2tT(CGU)K CSE4P36012 229 aa11.94□□□□□ -0.5
TRT2tT(CGU)K RPS24AP0CX31 135 aaKnown RBP11.93□□□□□ -0.5
TRT2tT(CGU)K RPS24BP0CX32 135 aaKnown RBP11.93□□□□□ -0.5
TRT2tT(CGU)K PRP43P53131 767 aaKnown RBP11.93□□□□□ -0.5
TRT2tT(CGU)K AUS1Q08409 1394 aa11.92□□□□□ -0.5
TRT2tT(CGU)K HIM1Q06674 414 aa11.91□□□□□ -0.5
TRT2tT(CGU)K VPS27P40343 622 aaKnown RBP11.9□□□□□ -0.5
TRT2tT(CGU)K YDL144CQ07589 356 aa11.9□□□□□ -0.5
TRT2tT(CGU)K CDC45Q08032 650 aa11.89□□□□□ -0.51
TRT2tT(CGU)K NOP2P40991 618 aaKnown RBP11.88□□□□□ -0.51
TRT2tT(CGU)K PAP2P53632 584 aaKnown RBP11.88□□□□□ -0.51
TRT2tT(CGU)K RTR1P40084 226 aaPredicted RBP11.87□□□□□ -0.51
TRT2tT(CGU)K GAS4Q08271 471 aa11.87□□□□□ -0.51
TRT2tT(CGU)K DPS1P04802 557 aaKnown RBP11.86□□□□□ -0.51
TRT2tT(CGU)K RRP46P53256 223 aaPredicted RBP11.86□□□□□ -0.51
TRT2tT(CGU)K YIL177CP40434 1758 aa11.86□□□□□ -0.51
TRT2tT(CGU)K YJL225CP40889 1758 aa11.86□□□□□ -0.51
TRT2tT(CGU)K YRF1-2P40105 1681 aa11.85□□□□□ -0.51
TRT2tT(CGU)K RPO41P13433 1351 aaKnown RBP11.84□□□□□ -0.51
TRT2tT(CGU)K RRP5Q05022 1729 aaKnown RBP11.84□□□□□ -0.51
TRT2tT(CGU)K MPP10P47083 593 aaKnown RBP11.83□□□□□ -0.52
TRT2tT(CGU)K FKS3Q04952 1785 aa11.82□□□□□ -0.52
TRT2tT(CGU)K APC1P53886 1748 aa11.81□□□□□ -0.52
TRT2tT(CGU)K PTP3P40048 928 aa11.8□□□□□ -0.52
TRT2tT(CGU)K RVB2Q12464 471 aaKnown RBP11.8□□□□□ -0.52
TRT2tT(CGU)K URB1P34241 1764 aaKnown RBP11.79□□□□□ -0.52
TRT2tT(CGU)K SUI2P20459 304 aaKnown RBP11.78□□□□□ -0.52
TRT2tT(CGU)K PRP5P21372 849 aaPredicted RBP11.78□□□□□ -0.52
TRT2tT(CGU)K PRD1P25375 712 aa11.78□□□□□ -0.52
TRT2tT(CGU)K PRP45P28004 379 aaPredicted RBP11.77□□□□□ -0.53
TRT2tT(CGU)K YRB30P53107 440 aaPredicted RBP11.77□□□□□ -0.53
TRT2tT(CGU)K BUB1P41695 1021 aaKnown RBP RIP-Chip data11.75□□□□□ -0.53not detected
TRT2tT(CGU)K YFR006WP43590 535 aa11.75□□□□□ -0.53
TRT2tT(CGU)K THI22Q06490 572 aa11.75□□□□□ -0.53
TRT2tT(CGU)K SAP155P43612 1002 aa11.74□□□□□ -0.53
TRT2tT(CGU)K AKL1P38080 1108 aaKnown RBP11.73□□□□□ -0.53
TRT2tT(CGU)K TPD3P31383 635 aa11.72□□□□□ -0.53
TRT2tT(CGU)K FUN12P39730 1002 aaKnown RBP11.72□□□□□ -0.53
TRT2tT(CGU)K MSB3P48566 633 aaPredicted RBP11.72□□□□□ -0.53
TRT2tT(CGU)K SLM3Q12093 417 aa11.72□□□□□ -0.53
TRT2tT(CGU)K YRF1-4O13559 1382 aa11.7□□□□□ -0.54
TRT2tT(CGU)K HEF3P53978 1044 aaKnown RBP11.69□□□□□ -0.54
TRT2tT(CGU)K DSD1P53095 428 aa11.68□□□□□ -0.54
TRT2tT(CGU)K NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.68□□□□□ -0.54not detected
TRT2tT(CGU)K RTT109Q07794 436 aa11.68□□□□□ -0.54
TRT2tT(CGU)K TCB1Q12466 1186 aa11.68□□□□□ -0.54
TRT2tT(CGU)K SIR4P11978 1358 aa11.66□□□□□ -0.54
TRT2tT(CGU)K REB1P21538 810 aa11.64□□□□□ -0.55
TRT2tT(CGU)K HSP104P31539 908 aaKnown RBP11.64□□□□□ -0.55
TRT2tT(CGU)K XKS1P42826 600 aa11.64□□□□□ -0.55
TRT2tT(CGU)K YNL050CP53952 270 aa11.64□□□□□ -0.55
TRT2tT(CGU)K RSF2P46974 1380 aa11.64□□□□□ -0.55
TRT2tT(CGU)K NTH2P35172 780 aa11.63□□□□□ -0.55
TRT2tT(CGU)K FPR3P38911 411 aaKnown RBP11.62□□□□□ -0.55
TRT2tT(CGU)K ENT1Q12518 454 aa11.62□□□□□ -0.55
TRT2tT(CGU)K RAD2P07276 1031 aa11.61□□□□□ -0.55
TRT2tT(CGU)K CTF4Q01454 927 aa11.61□□□□□ -0.55
TRT2tT(CGU)K AOS1Q06624 347 aa11.61□□□□□ -0.55
TRT2tT(CGU)K ZDS1P50111 915 aaKnown RBP11.6□□□□□ -0.55
TRT2tT(CGU)K MAK21Q12176 1025 aaKnown RBP11.6□□□□□ -0.55
TRT2tT(CGU)K RCR1P38212 213 aa11.59□□□□□ -0.55
TRT2tT(CGU)K MAM1P40065 302 aa11.59□□□□□ -0.55
TRT2tT(CGU)K GYP7P48365 746 aa11.59□□□□□ -0.55
TRT2tT(CGU)K YRF1-3P0CX14 1859 aa11.59□□□□□ -0.55
TRT2tT(CGU)K YRF1-7P0CX15 1859 aa11.59□□□□□ -0.55
TRT2tT(CGU)K YRF1-6P53819 1859 aa11.59□□□□□ -0.55
TRT2tT(CGU)K BUD27P43573 796 aaKnown RBP RIP-Chip data11.58□□□□□ -0.56not detected
TRT2tT(CGU)K DAL5P15365 543 aa11.57□□□□□ -0.56
TRT2tT(CGU)K RRT14P40470 206 aa11.57□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms