RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR52, Length 92 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR52snR52 ENV9Q08651 330 aa4.62□□□□□ -1.67
snR52snR52 ORC6P38826 435 aa4.61□□□□□ -1.67
snR52snR52 MET22P32179 357 aa4.6□□□□□ -1.67
snR52snR52 GAR1P28007 205 aaKnown RBP4.59□□□□□ -1.67
snR52snR52 PEX21P50091 288 aa4.59□□□□□ -1.67
snR52snR52 TUM1Q08686 304 aaKnown RBP4.58□□□□□ -1.68
snR52snR52 IFH1P39520 1085 aa4.57□□□□□ -1.68
snR52snR52 HED1Q03937 162 aa4.57□□□□□ -1.68
snR52snR52 YPR148CQ06523 435 aa4.57□□□□□ -1.68
snR52snR52 BDP1P46678 594 aa4.56□□□□□ -1.68
snR52snR52 YDL176WQ12027 708 aa4.56□□□□□ -1.68
snR52snR52 SPT16P32558 1035 aaKnown RBP4.55□□□□□ -1.68
snR52snR52 KIC1P38692 1080 aa4.55□□□□□ -1.68
snR52snR52 FRK1Q03002 865 aaPredicted RBP4.54□□□□□ -1.68
snR52snR52 GBP2P25555 427 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
snR52snR52 GCD11P32481 527 aaKnown RBP4.53□□□□□ -1.68
snR52snR52 NPL4P33755 580 aa4.53□□□□□ -1.68
snR52snR52 REF2P42073 533 aaPredicted RBP4.53□□□□□ -1.68
snR52snR52 MOD5P07884 428 aa4.52□□□□□ -1.69
snR52snR52 MVP1P40959 511 aaKnown RBP4.52□□□□□ -1.69
snR52snR52 YDR444WQ04093 687 aa4.52□□□□□ -1.69
snR52snR52 LCB5Q06147 687 aaKnown RBP4.52□□□□□ -1.69
snR52snR52 RRN7P40992 514 aa4.51□□□□□ -1.69
snR52snR52 MET32Q12041 191 aa4.51□□□□□ -1.69
snR52snR52 AFT1P22149 690 aa4.5□□□□□ -1.69
snR52snR52 RGR1P19263 1082 aa4.49□□□□□ -1.69
snR52snR52 MAK21Q12176 1025 aaKnown RBP4.49□□□□□ -1.69
snR52snR52 COX6P00427 148 aa4.48□□□□□ -1.69
snR52snR52 PAT1P25644 796 aaKnown RBP4.47□□□□□ -1.69
snR52snR52 AGE1Q04412 482 aa4.46□□□□□ -1.7
snR52snR52 YPR109WQ06104 294 aa4.46□□□□□ -1.7
snR52snR52 ASH1P34233 588 aa4.45□□□□□ -1.7
snR52snR52 PAC1P39946 494 aaKnown RBP4.45□□□□□ -1.7
snR52snR52 ERF2Q06551 359 aa4.45□□□□□ -1.7
snR52snR52 RRD1P40454 393 aaKnown RBP4.44□□□□□ -1.7
snR52snR52 KEX2P13134 814 aa4.43□□□□□ -1.7
snR52snR52 TPD3P31383 635 aa4.41□□□□□ -1.7
snR52snR52 ACO2P39533 789 aa4.41□□□□□ -1.7
snR52snR52 YJR115WP47152 169 aa4.4□□□□□ -1.71
snR52snR52 HST3P53687 447 aa4.4□□□□□ -1.71
snR52snR52 MSB3P48566 633 aaPredicted RBP4.39□□□□□ -1.71
snR52snR52 RTF1P53064 558 aa4.39□□□□□ -1.71
snR52snR52 TUB4P53378 473 aa4.38□□□□□ -1.71
snR52snR52 PSE1P32337 1089 aaKnown RBP4.37□□□□□ -1.71
snR52snR52 PUS5Q06244 254 aa4.37□□□□□ -1.71
snR52snR52 MTC5Q03897 1148 aa4.36□□□□□ -1.71
snR52snR52 CLB5P30283 435 aa4.35□□□□□ -1.71
snR52snR52 SIT4P20604 311 aa4.34□□□□□ -1.71
snR52snR52 VPS70P47161 811 aa4.34□□□□□ -1.71
snR52snR52 CAF120P53836 1060 aa4.33□□□□□ -1.72
snR52snR52 YNL115CP53925 644 aa4.32□□□□□ -1.72
snR52snR52 TRK2P28584 889 aa4.31□□□□□ -1.72
snR52snR52 GLY1P37303 387 aaKnown RBP4.31□□□□□ -1.72
snR52snR52 OPT2Q06593 877 aa4.31□□□□□ -1.72
snR52snR52 HXT10P43581 546 aa4.3□□□□□ -1.72
snR52snR52 PTK2P47116 818 aaKnown RBP4.3□□□□□ -1.72
snR52snR52 PDC1P06169 563 aaKnown RBP4.29□□□□□ -1.72
snR52snR52 SYH1Q02875 849 aaKnown RBP4.29□□□□□ -1.72
snR52snR52 MRT4P33201 236 aaKnown RBP4.28□□□□□ -1.72
snR52snR52 KXD1P53158 218 aa4.28□□□□□ -1.72
snR52snR52 YGR035CP53222 116 aa4.28□□□□□ -1.72
snR52snR52 RTT106P40161 455 aa4.27□□□□□ -1.73
snR52snR52 YIR007WP40566 764 aa4.27□□□□□ -1.73
snR52snR52 NUP85P46673 744 aa4.27□□□□□ -1.73
snR52snR52 HPF1Q05164 967 aa4.26□□□□□ -1.73
snR52snR52 TY1A-BLQ12266 440 aa4.26□□□□□ -1.73
snR52snR52 YLR346CQ06139 101 aa4.25□□□□□ -1.73
snR52snR52 PBS2P08018 668 aa4.24□□□□□ -1.73
snR52snR52 UGA3P26370 528 aa4.24□□□□□ -1.73
snR52snR52 CKB1P43639 278 aa4.23□□□□□ -1.73
snR52snR52 NIS1P53939 407 aa4.23□□□□□ -1.73
snR52snR52 RPA14P50106 137 aa4.22□□□□□ -1.73
snR52snR52 SCW11P53189 542 aa4.22□□□□□ -1.73
snR52snR52 YPR097WQ06839 1073 aa4.22□□□□□ -1.73
snR52snR52 MIP1P15801 1254 aa4.21□□□□□ -1.74
snR52snR52 TYW1Q08960 810 aaKnown RBP4.2□□□□□ -1.74
snR52snR52 SRF1Q12516 437 aa4.2□□□□□ -1.74
snR52snR52 DSF2P38213 736 aa4.19□□□□□ -1.74
snR52snR52 TEA1P47988 759 aa4.19□□□□□ -1.74
snR52snR52 NUP42P49686 430 aaKnown RBP4.19□□□□□ -1.74
snR52snR52 ALR1Q08269 859 aa4.19□□□□□ -1.74
snR52snR52 YPR204WQ08995 1032 aa4.19□□□□□ -1.74
snR52snR52 MAM3Q12296 706 aa4.19□□□□□ -1.74
snR52snR52 CCP1P00431 361 aa4.18□□□□□ -1.74
snR52snR52 ICP55P40051 511 aa4.18□□□□□ -1.74
snR52snR52 AAD14P42884 376 aa4.18□□□□□ -1.74
snR52snR52 YDL206WQ12424 762 aa4.17□□□□□ -1.74
snR52snR52 DPH6Q12429 685 aa4.17□□□□□ -1.74
snR52snR52 IXR1P33417 597 aa4.16□□□□□ -1.74
snR52snR52 YBL086CP38177 466 aa4.16□□□□□ -1.74
snR52snR52 IES2P40154 320 aa4.16□□□□□ -1.74
snR52snR52 BUB1P41695 1021 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
snR52snR52 PUS6P53294 404 aa4.16□□□□□ -1.74
snR52snR52 FPK1P53739 893 aa4.16□□□□□ -1.74
snR52snR52 SLY41P22215 453 aa4.15□□□□□ -1.75
snR52snR52 KIP2P28743 706 aa4.15□□□□□ -1.75
snR52snR52 ROG3P43602 733 aa4.15□□□□□ -1.75
snR52snR52 YJR098CP47139 656 aa4.15□□□□□ -1.75
snR52snR52 LSC2P53312 427 aa4.15□□□□□ -1.75
snR52snR52 TY1A-MR1Q04215 440 aa4.15□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms