RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	DPS1	P04802	557 aa	Known RBP	6.71	□□□□□ -1.34
CMR3	YPR013C	ORC6	P38826	435 aa		6.71	□□□□□ -1.34
CMR3	YPR013C	YML082W	Q04533	649 aa	Known RBP	6.71	□□□□□ -1.34
CMR3	YPR013C	TYW1	Q08960	810 aa	Known RBP	6.71	□□□□□ -1.34
CMR3	YPR013C	CLB5	P30283	435 aa		6.7	□□□□□ -1.34
CMR3	YPR013C	YPR015C	Q12531	247 aa		6.7	□□□□□ -1.34
CMR3	YPR013C	ERG12	P07277	443 aa		6.69	□□□□□ -1.34
CMR3	YPR013C	SLD2	P34252	453 aa		6.69	□□□□□ -1.34
CMR3	YPR013C	RAM1	P22007	431 aa		6.68	□□□□□ -1.34
CMR3	YPR013C	CPS1	P27614	576 aa		6.68	□□□□□ -1.34
CMR3	YPR013C	RTG2	P32608	588 aa	Known RBP	6.68	□□□□□ -1.34
CMR3	YPR013C	TTI1	P36097	1038 aa		6.68	□□□□□ -1.34
CMR3	YPR013C	RPL34A	P87262	121 aa	Predicted RBP	6.68	□□□□□ -1.34
CMR3	YPR013C	YPR204W	Q08995	1032 aa		6.68	□□□□□ -1.34
CMR3	YPR013C	RGR1	P19263	1082 aa		6.67	□□□□□ -1.34
CMR3	YPR013C	NMA111	P53920	997 aa		6.67	□□□□□ -1.34
CMR3	YPR013C	CSE4	P36012	229 aa		6.66	□□□□□ -1.34
CMR3	YPR013C	BIO2	P32451	375 aa		6.65	□□□□□ -1.34
CMR3	YPR013C	HST2	P53686	357 aa		6.65	□□□□□ -1.34
CMR3	YPR013C	YMR196W	Q04336	1088 aa		6.65	□□□□□ -1.34
CMR3	YPR013C	PTC2	P39966	464 aa	Known RBP	6.64	□□□□□ -1.35
CMR3	YPR013C	MVP1	P40959	511 aa	Known RBP	6.64	□□□□□ -1.35
CMR3	YPR013C	FPK1	P53739	893 aa		6.64	□□□□□ -1.35
CMR3	YPR013C	DPL1	Q05567	589 aa		6.64	□□□□□ -1.35
CMR3	YPR013C	CDC3	P32457	520 aa	Known RBP	6.63	□□□□□ -1.35
CMR3	YPR013C	YNL108C	P53929	270 aa		6.63	□□□□□ -1.35
CMR3	YPR013C	NIS1	P53939	407 aa		6.63	□□□□□ -1.35
CMR3	YPR013C	PKH3	Q03306	898 aa	Predicted RBP	6.63	□□□□□ -1.35
CMR3	YPR013C	RAD59	Q12223	238 aa		6.63	□□□□□ -1.35
CMR3	YPR013C	MMP1	Q12372	583 aa		6.63	□□□□□ -1.35
CMR3	YPR013C	MRX12	P47084	519 aa		6.62	□□□□□ -1.35
CMR3	YPR013C	NOP7	P53261	605 aa	Known RBP	6.62	□□□□□ -1.35
CMR3	YPR013C	NOB1	Q08444	459 aa	Known RBP	6.62	□□□□□ -1.35
CMR3	YPR013C	ESS1	P22696	170 aa		6.6	□□□□□ -1.35
CMR3	YPR013C	CSC1	Q06538	782 aa		6.6	□□□□□ -1.35
CMR3	YPR013C	CDC73	Q06697	393 aa		6.6	□□□□□ -1.35
CMR3	YPR013C	RPP1B	P10622	106 aa	Known RBP	6.59	□□□□□ -1.35
CMR3	YPR013C	SUP45	P12385	437 aa	Known RBP	6.59	□□□□□ -1.35
CMR3	YPR013C	SIS2	P36024	562 aa		6.59	□□□□□ -1.35
CMR3	YPR013C	SNU71	P53207	620 aa	Known RBP	6.59	□□□□□ -1.35
CMR3	YPR013C	YPR109W	Q06104	294 aa		6.59	□□□□□ -1.35
CMR3	YPR013C	GAP1	P19145	602 aa	Predicted RBP	6.58	□□□□□ -1.36
CMR3	YPR013C	SCJ1	P25303	377 aa		6.58	□□□□□ -1.36
CMR3	YPR013C	ORC1	P54784	914 aa	Predicted RBP	6.58	□□□□□ -1.36
CMR3	YPR013C	RAS1	P01119	309 aa		6.57	□□□□□ -1.36
CMR3	YPR013C	ARG8	P18544	423 aa		6.57	□□□□□ -1.36
CMR3	YPR013C	SDH2	P21801	266 aa		6.57	□□□□□ -1.36
CMR3	YPR013C	SPT5	P27692	1063 aa	Known RBP	6.57	□□□□□ -1.36
CMR3	YPR013C	SSF1	P38789	453 aa	Predicted RBP	6.56	□□□□□ -1.36
CMR3	YPR013C	ISU2	Q12056	156 aa		6.56	□□□□□ -1.36
CMR3	YPR013C	PDR1	P12383	1068 aa		6.55	□□□□□ -1.36
CMR3	YPR013C	PUP1	P25043	261 aa		6.55	□□□□□ -1.36
CMR3	YPR013C	YJU3	P28321	313 aa		6.55	□□□□□ -1.36
CMR3	YPR013C	ENO1	P00924	437 aa	Known RBP	6.54	□□□□□ -1.36
CMR3	YPR013C	ENO2	P00925	437 aa	Known RBP	6.54	□□□□□ -1.36
CMR3	YPR013C	SIT4	P20604	311 aa		6.54	□□□□□ -1.36
CMR3	YPR013C	HEM3	P28789	327 aa		6.54	□□□□□ -1.36
CMR3	YPR013C	YML083C	Q04526	418 aa		6.54	□□□□□ -1.36
CMR3	YPR013C	TFB4	Q12004	338 aa		6.54	□□□□□ -1.36
CMR3	YPR013C	HAT1	Q12341	374 aa		6.53	□□□□□ -1.36
CMR3	YPR013C	YDJ1	P25491	409 aa	Known RBP	6.52	□□□□□ -1.37
CMR3	YPR013C	MRX10	Q05648	414 aa		6.52	□□□□□ -1.37
CMR3	YPR013C	MAK16	P10962	306 aa	Predicted RBP	6.51	□□□□□ -1.37
CMR3	YPR013C	TGL4	P36165	910 aa		6.51	□□□□□ -1.37
CMR3	YPR013C	PEX21	P50091	288 aa		6.51	□□□□□ -1.37
CMR3	YPR013C	SEN54	Q02825	467 aa	Predicted RBP	6.51	□□□□□ -1.37
CMR3	YPR013C	RSC30	P38781	883 aa		6.5	□□□□□ -1.37
CMR3	YPR013C	RIM21	P48565	533 aa		6.5	□□□□□ -1.37
CMR3	YPR013C	LAM6	Q08001	693 aa		6.5	□□□□□ -1.37
CMR3	YPR013C	YPP1	P46951	817 aa		6.49	□□□□□ -1.37
CMR3	YPR013C	SLY41	P22215	453 aa		6.48	□□□□□ -1.37
CMR3	YPR013C	RRN6	P32786	894 aa		6.48	□□□□□ -1.37
CMR3	YPR013C	MET10	P39692	1035 aa		6.48	□□□□□ -1.37
CMR3	YPR013C	TUM1	Q08686	304 aa	Known RBP	6.47	□□□□□ -1.37
CMR3	YPR013C	NAP1	P25293	417 aa	Known RBP	6.46	□□□□□ -1.38
CMR3	YPR013C	PAM1	P37304	830 aa	Known RBP	6.46	□□□□□ -1.38
CMR3	YPR013C	STM1	P39015	273 aa	Known RBP	6.45	□□□□□ -1.38
CMR3	YPR013C	NAF1	P53919	492 aa	Known RBP	6.45	□□□□□ -1.38
CMR3	YPR013C	YNL115C	P53925	644 aa		6.45	□□□□□ -1.38
CMR3	YPR013C	AMS1	P22855	1083 aa		6.44	□□□□□ -1.38
CMR3	YPR013C	PEP12	P32854	288 aa		6.44	□□□□□ -1.38
CMR3	YPR013C	RTF1	P53064	558 aa		6.44	□□□□□ -1.38
CMR3	YPR013C	ASF1	P32447	279 aa		6.43	□□□□□ -1.38
CMR3	YPR013C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	6.43	□□□□□ -1.38	not detected
CMR3	YPR013C	SEC20	P28791	383 aa		6.42	□□□□□ -1.38
CMR3	YPR013C	ECM23	Q02710	187 aa		6.42	□□□□□ -1.38
CMR3	YPR013C	TRM1	P15565	570 aa	Known RBP	6.41	□□□□□ -1.38
CMR3	YPR013C	PUS6	P53294	404 aa		6.41	□□□□□ -1.38
CMR3	YPR013C	IPL1	P38991	367 aa		6.4	□□□□□ -1.38
CMR3	YPR013C	KTR7	P40504	517 aa		6.4	□□□□□ -1.38
CMR3	YPR013C	STR2	P47164	639 aa		6.4	□□□□□ -1.38
CMR3	YPR013C	ITT1	Q04638	464 aa		6.4	□□□□□ -1.38
CMR3	YPR013C	BUD20	Q08004	166 aa	Predicted RBP	6.4	□□□□□ -1.38
CMR3	YPR013C	YRR1	Q12172	810 aa		6.4	□□□□□ -1.38
CMR3	YPR013C	MCM16	Q12262	181 aa		6.4	□□□□□ -1.38
CMR3	YPR013C	YBL113C	Q7M4S9	792 aa		6.4	□□□□□ -1.38
CMR3	YPR013C	RDS2	P19541	446 aa	Known RBP	6.39	□□□□□ -1.39
CMR3	YPR013C	GYP1	Q08484	637 aa		6.39	□□□□□ -1.39
CMR3	YPR013C	ENV9	Q08651	330 aa		6.39	□□□□□ -1.39
CMR3	YPR013C	GAL2	P13181	574 aa		6.38	□□□□□ -1.39

Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms