RNA–Protein interactions for RNA: YPL029W

SUV3, Transcript of ATP-dependent RNA helicase, yeastyeast

Gene SUV3, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUV3YPL029W SCT1P32784 759 aa11.17□□□□□ -0.62
SUV3YPL029W FKH1P40466 484 aa11.17□□□□□ -0.62
SUV3YPL029W RCM1P53972 490 aa11.16□□□□□ -0.62
SUV3YPL029W CFT1Q06632 1357 aaKnown RBP11.16□□□□□ -0.62
SUV3YPL029W YML133CQ03099 1374 aa11.14□□□□□ -0.63
SUV3YPL029W YLL067CQ07888 1374 aa11.14□□□□□ -0.63
SUV3YPL029W YLL066CQ99208 1374 aa11.14□□□□□ -0.63
SUV3YPL029W PPH3P32345 308 aa11.13□□□□□ -0.63
SUV3YPL029W YEF3P16521 1044 aaKnown RBP11.09□□□□□ -0.63
SUV3YPL029W DMA1P38823 416 aa11.09□□□□□ -0.63
SUV3YPL029W TRK1P12685 1235 aa11.09□□□□□ -0.63
SUV3YPL029W NOP2P40991 618 aaKnown RBP11.09□□□□□ -0.63
SUV3YPL029W YNR029CP53729 429 aaKnown RBP11.09□□□□□ -0.63
SUV3YPL029W TY1B-NL2Q99337 1749 aaKnown RBP11.06□□□□□ -0.64
SUV3YPL029W PSK1P31374 1356 aa11.06□□□□□ -0.64
SUV3YPL029W CPS1P27614 576 aa11.05□□□□□ -0.64
SUV3YPL029W LEU2P04173 364 aaPredicted RBP11□□□□□ -0.65
SUV3YPL029W SNF2P22082 1703 aa10.97□□□□□ -0.65
SUV3YPL029W FUN12P39730 1002 aaKnown RBP10.97□□□□□ -0.65
SUV3YPL029W HIM1Q06674 414 aa10.97□□□□□ -0.65
SUV3YPL029W YDL144CQ07589 356 aa10.96□□□□□ -0.65
SUV3YPL029W DIP2Q12220 943 aaPredicted RBP10.96□□□□□ -0.65
SUV3YPL029W TY4B-HP0C2J7 1802 aa10.96□□□□□ -0.66
SUV3YPL029W TY4B-JP47024 1803 aa10.96□□□□□ -0.66
SUV3YPL029W RRP46P53256 223 aaPredicted RBP10.96□□□□□ -0.66
SUV3YPL029W MTR4P47047 1073 aaKnown RBP10.95□□□□□ -0.66
SUV3YPL029W KAR2P16474 682 aaKnown RBP10.94□□□□□ -0.66
SUV3YPL029W PDI1P17967 522 aaKnown RBP10.94□□□□□ -0.66
SUV3YPL029W THI12P42883 340 aa10.94□□□□□ -0.66
SUV3YPL029W THI5P43534 340 aa10.94□□□□□ -0.66
SUV3YPL029W THI11P47183 340 aa10.94□□□□□ -0.66
SUV3YPL029W THI13Q07748 340 aa10.94□□□□□ -0.66
SUV3YPL029W LEO1P38439 464 aa10.93□□□□□ -0.66
SUV3YPL029W AUS1Q08409 1394 aa10.93□□□□□ -0.66
SUV3YPL029W RPS24AP0CX31 135 aaKnown RBP10.93□□□□□ -0.66
SUV3YPL029W RPS24BP0CX32 135 aaKnown RBP10.93□□□□□ -0.66
SUV3YPL029W VPS27P40343 622 aaKnown RBP10.93□□□□□ -0.66
SUV3YPL029W MPP10P47083 593 aaKnown RBP10.93□□□□□ -0.66
SUV3YPL029W YMR196WQ04336 1088 aa10.93□□□□□ -0.66
SUV3YPL029W TAP42Q04372 366 aa10.93□□□□□ -0.66
SUV3YPL029W RPP0P05317 312 aaKnown RBP10.91□□□□□ -0.66
SUV3YPL029W CSE4P36012 229 aa10.91□□□□□ -0.66
SUV3YPL029W RVB2Q12464 471 aaKnown RBP10.91□□□□□ -0.66
SUV3YPL029W IOC4Q04213 475 aa10.9□□□□□ -0.66
SUV3YPL029W CDC45Q08032 650 aa10.9□□□□□ -0.66
SUV3YPL029W GAS4Q08271 471 aa10.9□□□□□ -0.66
SUV3YPL029W ADE6P38972 1358 aaKnown RBP10.9□□□□□ -0.66
SUV3YPL029W PAP2P53632 584 aaKnown RBP10.9□□□□□ -0.66
SUV3YPL029W RTR1P40084 226 aaPredicted RBP10.89□□□□□ -0.67
SUV3YPL029W RTF1P53064 558 aa10.89□□□□□ -0.67
SUV3YPL029W YIL177CP40434 1758 aa10.89□□□□□ -0.67
SUV3YPL029W YJL225CP40889 1758 aa10.89□□□□□ -0.67
SUV3YPL029W SUI2P20459 304 aaKnown RBP10.88□□□□□ -0.67
SUV3YPL029W GRX4P32642 244 aa10.86□□□□□ -0.67
SUV3YPL029W PRP43P53131 767 aaKnown RBP10.86□□□□□ -0.67
SUV3YPL029W DPS1P04802 557 aaKnown RBP10.84□□□□□ -0.67
SUV3YPL029W PRD1P25375 712 aa10.83□□□□□ -0.68
SUV3YPL029W RRP5Q05022 1729 aaKnown RBP10.83□□□□□ -0.68
SUV3YPL029W SAP155P43612 1002 aa10.82□□□□□ -0.68
SUV3YPL029W THI22Q06490 572 aa10.82□□□□□ -0.68
SUV3YPL029W BUB1P41695 1021 aaKnown RBP RIP-Chip data10.81□□□□□ -0.68not detected
SUV3YPL029W MIF2P35201 549 aa10.8□□□□□ -0.68
SUV3YPL029W TPD3P31383 635 aa10.8□□□□□ -0.68
SUV3YPL029W RPO41P13433 1351 aaKnown RBP10.78□□□□□ -0.68
SUV3YPL029W URB1P34241 1764 aaKnown RBP10.77□□□□□ -0.69
SUV3YPL029W YRF1-2P40105 1681 aa10.77□□□□□ -0.69
SUV3YPL029W HEF3P53978 1044 aaKnown RBP10.76□□□□□ -0.69
SUV3YPL029W RTT109Q07794 436 aa10.76□□□□□ -0.69
SUV3YPL029W APC1P53886 1748 aa10.75□□□□□ -0.69
SUV3YPL029W FKS3Q04952 1785 aa10.75□□□□□ -0.69
SUV3YPL029W YRB30P53107 440 aaPredicted RBP10.75□□□□□ -0.69
SUV3YPL029W PRP45P28004 379 aaPredicted RBP10.74□□□□□ -0.69
SUV3YPL029W AKL1P38080 1108 aaKnown RBP10.74□□□□□ -0.69
SUV3YPL029W NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.74□□□□□ -0.69not detected
SUV3YPL029W PRP5P21372 849 aaPredicted RBP10.73□□□□□ -0.69
SUV3YPL029W MSB3P48566 633 aaPredicted RBP10.72□□□□□ -0.69
SUV3YPL029W YRF1-4O13559 1382 aa10.71□□□□□ -0.69
SUV3YPL029W DAL5P15365 543 aa10.69□□□□□ -0.7
SUV3YPL029W PTP3P40048 928 aa10.69□□□□□ -0.7
SUV3YPL029W DSD1P53095 428 aa10.69□□□□□ -0.7
SUV3YPL029W SLM3Q12093 417 aa10.69□□□□□ -0.7
SUV3YPL029W HSP104P31539 908 aaKnown RBP10.67□□□□□ -0.7
SUV3YPL029W FPR3P38911 411 aaKnown RBP10.67□□□□□ -0.7
SUV3YPL029W YIL092WP40497 633 aa10.67□□□□□ -0.7
SUV3YPL029W RAD2P07276 1031 aa10.66□□□□□ -0.7
SUV3YPL029W NTH2P35172 780 aa10.65□□□□□ -0.7
SUV3YPL029W RRT14P40470 206 aa10.64□□□□□ -0.71
SUV3YPL029W YNL050CP53952 270 aa10.64□□□□□ -0.71
SUV3YPL029W YBR287WP38355 427 aa10.62□□□□□ -0.71
SUV3YPL029W SIR4P11978 1358 aa10.62□□□□□ -0.71
SUV3YPL029W XKS1P42826 600 aa10.61□□□□□ -0.71
SUV3YPL029W ZDS1P50111 915 aaKnown RBP10.61□□□□□ -0.71
SUV3YPL029W TCB1Q12466 1186 aa10.61□□□□□ -0.71
SUV3YPL029W GYP7P48365 746 aa10.61□□□□□ -0.71
SUV3YPL029W YRF1-3P0CX14 1859 aa10.6□□□□□ -0.71
SUV3YPL029W YRF1-7P0CX15 1859 aa10.6□□□□□ -0.71
SUV3YPL029W YRF1-6P53819 1859 aa10.6□□□□□ -0.71
SUV3YPL029W RCR1P38212 213 aa10.6□□□□□ -0.71
SUV3YPL029W MAK21Q12176 1025 aaKnown RBP10.6□□□□□ -0.71
SUV3YPL029W POL32P47110 350 aa10.6□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms