RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W ESL2P36168 1195 aa9.33□□□□□ -0.92
LSC1YOR142W APP1P53933 587 aa9.33□□□□□ -0.92
LSC1YOR142W TAF8Q03750 510 aa9.33□□□□□ -0.92
LSC1YOR142W YAH1Q12184 172 aaKnown RBP9.33□□□□□ -0.92
LSC1YOR142W RCM1P53972 490 aa9.28□□□□□ -0.92
LSC1YOR142W REB1P21538 810 aa9.27□□□□□ -0.93
LSC1YOR142W CPS1P27614 576 aa9.27□□□□□ -0.93
LSC1YOR142W PPH3P32345 308 aa9.27□□□□□ -0.93
LSC1YOR142W NAP1P25293 417 aaKnown RBP9.25□□□□□ -0.93
LSC1YOR142W YIL177CP40434 1758 aa9.24□□□□□ -0.93
LSC1YOR142W YJL225CP40889 1758 aa9.24□□□□□ -0.93
LSC1YOR142W YLR419WQ06698 1435 aaKnown RBP9.22□□□□□ -0.93
LSC1YOR142W KIP3P53086 805 aaKnown RBP9.22□□□□□ -0.93
LSC1YOR142W ENT1Q12518 454 aa9.22□□□□□ -0.93
LSC1YOR142W SPE2P21182 396 aa9.21□□□□□ -0.94
LSC1YOR142W YIL055CP40523 627 aaKnown RBP9.21□□□□□ -0.94
LSC1YOR142W PSK1P31374 1356 aa9.21□□□□□ -0.94
LSC1YOR142W ADE6P38972 1358 aaKnown RBP9.2□□□□□ -0.94
LSC1YOR142W URB1P34241 1764 aaKnown RBP9.19□□□□□ -0.94
LSC1YOR142W FKS3Q04952 1785 aa9.19□□□□□ -0.94
LSC1YOR142W GLN1P32288 370 aaKnown RBP9.19□□□□□ -0.94
LSC1YOR142W ORC1P54784 914 aaPredicted RBP9.18□□□□□ -0.94
LSC1YOR142W MLP1Q02455 1875 aaKnown RBP9.18□□□□□ -0.94
LSC1YOR142W ENV9Q08651 330 aa9.18□□□□□ -0.94
LSC1YOR142W PRP45P28004 379 aaPredicted RBP9.16□□□□□ -0.94
LSC1YOR142W TSR3Q12094 313 aaKnown RBP9.16□□□□□ -0.94
LSC1YOR142W YRF1-3P0CX14 1859 aa9.15□□□□□ -0.95
LSC1YOR142W YRF1-7P0CX15 1859 aa9.15□□□□□ -0.95
LSC1YOR142W YRF1-6P53819 1859 aa9.15□□□□□ -0.95
LSC1YOR142W YML133CQ03099 1374 aa9.14□□□□□ -0.95
LSC1YOR142W YLL067CQ07888 1374 aa9.14□□□□□ -0.95
LSC1YOR142W YLL066CQ99208 1374 aa9.14□□□□□ -0.95
LSC1YOR142W IMH1Q06704 911 aaKnown RBP9.13□□□□□ -0.95
LSC1YOR142W CHZ1P40019 153 aaPredicted RBP9.12□□□□□ -0.95
LSC1YOR142W PRP5P21372 849 aaPredicted RBP9.11□□□□□ -0.95
LSC1YOR142W MSB3P48566 633 aaPredicted RBP9.1□□□□□ -0.95
LSC1YOR142W APC1P53886 1748 aa9.09□□□□□ -0.95
LSC1YOR142W YMR074CQ04773 145 aa9.08□□□□□ -0.96
LSC1YOR142W YCK3P39962 524 aa9.07□□□□□ -0.96
LSC1YOR142W LEU2P04173 364 aaPredicted RBP9.06□□□□□ -0.96
LSC1YOR142W RPS24AP0CX31 135 aaKnown RBP9.06□□□□□ -0.96
LSC1YOR142W RPS24BP0CX32 135 aaKnown RBP9.06□□□□□ -0.96
LSC1YOR142W MTR4P47047 1073 aaKnown RBP9.06□□□□□ -0.96
LSC1YOR142W PRP43P53131 767 aaKnown RBP9.06□□□□□ -0.96
LSC1YOR142W CSE4P36012 229 aa9.05□□□□□ -0.96
LSC1YOR142W SLM3Q12093 417 aa9.03□□□□□ -0.96
LSC1YOR142W RSF2P46974 1380 aa9.02□□□□□ -0.97
LSC1YOR142W BUD31P25337 157 aaPredicted RBP9□□□□□ -0.97
LSC1YOR142W FKH1P40466 484 aa9□□□□□ -0.97
LSC1YOR142W TCB1Q12466 1186 aa9□□□□□ -0.97
LSC1YOR142W SNF2P22082 1703 aa9□□□□□ -0.97
LSC1YOR142W RTG3P38165 486 aa8.99□□□□□ -0.97
LSC1YOR142W IES2P40154 320 aa8.99□□□□□ -0.97
LSC1YOR142W DOT5P40553 215 aa8.98□□□□□ -0.97
LSC1YOR142W RPL17AP05740 184 aaKnown RBP8.97□□□□□ -0.97
LSC1YOR142W RPL17BP46990 184 aaKnown RBP8.97□□□□□ -0.97
LSC1YOR142W RIM15P43565 1770 aa8.96□□□□□ -0.97
LSC1YOR142W LEU3P08638 886 aa8.96□□□□□ -0.98
LSC1YOR142W HAA1Q12753 694 aaKnown RBP8.96□□□□□ -0.98
LSC1YOR142W MHP1P43638 1398 aa8.96□□□□□ -0.98
LSC1YOR142W ROM2P51862 1356 aaKnown RBP8.96□□□□□ -0.98
LSC1YOR142W AUS1Q08409 1394 aa8.96□□□□□ -0.98
LSC1YOR142W FOX2Q02207 900 aaKnown RBP8.95□□□□□ -0.98
LSC1YOR142W GAS4Q08271 471 aa8.95□□□□□ -0.98
LSC1YOR142W SCT1P32784 759 aa8.94□□□□□ -0.98
LSC1YOR142W XKS1P42826 600 aa8.94□□□□□ -0.98
LSC1YOR142W DPS1P04802 557 aaKnown RBP8.93□□□□□ -0.98
LSC1YOR142W POL5P39985 1022 aaKnown RBP8.93□□□□□ -0.98
LSC1YOR142W RPN11P43588 306 aaKnown RBP8.93□□□□□ -0.98
LSC1YOR142W PDI1P17967 522 aaKnown RBP8.92□□□□□ -0.98
LSC1YOR142W PDS5Q04264 1277 aa8.9□□□□□ -0.98
LSC1YOR142W YKL133CP36066 463 aa8.89□□□□□ -0.99
LSC1YOR142W NPR2P39923 615 aa8.89□□□□□ -0.99
LSC1YOR142W RTF1P53064 558 aa8.89□□□□□ -0.99
LSC1YOR142W HIM1Q06674 414 aa8.89□□□□□ -0.99
LSC1YOR142W YRF1-4O13559 1382 aa8.88□□□□□ -0.99
LSC1YOR142W ENP1P38333 483 aaKnown RBP8.88□□□□□ -0.99
LSC1YOR142W TAP42Q04372 366 aa8.88□□□□□ -0.99
LSC1YOR142W SEC3P33332 1336 aaKnown RBP8.87□□□□□ -0.99
LSC1YOR142W COBP00163 385 aa8.87□□□□□ -0.99
LSC1YOR142W UBP1P25037 809 aa8.87□□□□□ -0.99
LSC1YOR142W NST1P53935 1240 aa8.87□□□□□ -0.99
LSC1YOR142W SIR4P11978 1358 aa8.86□□□□□ -0.99
LSC1YOR142W YEF3P16521 1044 aaKnown RBP8.86□□□□□ -0.99
LSC1YOR142W YKR075CP36155 307 aa8.86□□□□□ -0.99
LSC1YOR142W RCR1P38212 213 aa8.86□□□□□ -0.99
LSC1YOR142W EDE1P34216 1381 aa8.86□□□□□ -0.99
LSC1YOR142W LYS4P49367 693 aaPredicted RBP8.85□□□□□ -0.99
LSC1YOR142W GRX4P32642 244 aa8.84□□□□□ -0.99
LSC1YOR142W ADE16P54113 591 aaKnown RBP8.84□□□□□ -0.99
LSC1YOR142W FRK1Q03002 865 aaPredicted RBP8.84□□□□□ -0.99
LSC1YOR142W YBL086CP38177 466 aa8.82□□□□□ -1
LSC1YOR142W YJL181WP46987 611 aa8.81□□□□□ -1
LSC1YOR142W LAM6Q08001 693 aa8.81□□□□□ -1
LSC1YOR142W RPO41P13433 1351 aaKnown RBP8.81□□□□□ -1
LSC1YOR142W TRK1P12685 1235 aa8.8□□□□□ -1
LSC1YOR142W KAR2P16474 682 aaKnown RBP8.8□□□□□ -1
LSC1YOR142W PRP40P33203 583 aaKnown RBP8.8□□□□□ -1
LSC1YOR142W CTH1P47976 325 aa8.8□□□□□ -1
LSC1YOR142W MEC3Q02574 474 aa8.79□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms