RNA–Protein interactions for RNA: YNR015W

SMM1, Transcript of Dihydrouridine synthase, yeastyeast

Gene SMM1, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMM1YNR015W SPE2P21182 396 aa12.83□□□□□ -0.36
SMM1YNR015W RCM1P53972 490 aa12.83□□□□□ -0.36
SMM1YNR015W CPS1P27614 576 aa12.82□□□□□ -0.36
SMM1YNR015W YAH1Q12184 172 aaKnown RBP12.81□□□□□ -0.36
SMM1YNR015W ORC1P54784 914 aaPredicted RBP12.8□□□□□ -0.36
SMM1YNR015W PPH3P32345 308 aa12.79□□□□□ -0.36
SMM1YNR015W APP1P53933 587 aa12.74□□□□□ -0.37
SMM1YNR015W YLR419WQ06698 1435 aaKnown RBP12.73□□□□□ -0.37
SMM1YNR015W PSK1P31374 1356 aa12.71□□□□□ -0.37
SMM1YNR015W CHZ1P40019 153 aaPredicted RBP12.71□□□□□ -0.37
SMM1YNR015W REB1P21538 810 aa12.69□□□□□ -0.38
SMM1YNR015W ENT1Q12518 454 aa12.68□□□□□ -0.38
SMM1YNR015W SCT1P32784 759 aa12.65□□□□□ -0.38
SMM1YNR015W PRP45P28004 379 aaPredicted RBP12.64□□□□□ -0.39
SMM1YNR015W ADE6P38972 1358 aaKnown RBP12.64□□□□□ -0.39
SMM1YNR015W RRP5Q05022 1729 aaKnown RBP12.62□□□□□ -0.39
SMM1YNR015W ENV9Q08651 330 aa12.62□□□□□ -0.39
SMM1YNR015W LEU2P04173 364 aaPredicted RBP12.61□□□□□ -0.39
SMM1YNR015W POL5P39985 1022 aaKnown RBP12.61□□□□□ -0.39
SMM1YNR015W YIL055CP40523 627 aaKnown RBP12.61□□□□□ -0.39
SMM1YNR015W TY4B-HP0C2J7 1802 aa12.6□□□□□ -0.39
SMM1YNR015W TY4B-JP47024 1803 aa12.6□□□□□ -0.39
SMM1YNR015W PRP5P21372 849 aaPredicted RBP12.6□□□□□ -0.39
SMM1YNR015W PRP43P53131 767 aaKnown RBP12.59□□□□□ -0.39
SMM1YNR015W MTR4P47047 1073 aaKnown RBP12.58□□□□□ -0.4
SMM1YNR015W YML133CQ03099 1374 aa12.57□□□□□ -0.4
SMM1YNR015W YLL067CQ07888 1374 aa12.57□□□□□ -0.4
SMM1YNR015W YLL066CQ99208 1374 aa12.57□□□□□ -0.4
SMM1YNR015W FKH1P40466 484 aa12.56□□□□□ -0.4
SMM1YNR015W CSE4P36012 229 aa12.55□□□□□ -0.4
SMM1YNR015W GLN1P32288 370 aaKnown RBP12.54□□□□□ -0.4
SMM1YNR015W RPS24AP0CX31 135 aaKnown RBP12.53□□□□□ -0.4
SMM1YNR015W RPS24BP0CX32 135 aaKnown RBP12.53□□□□□ -0.4
SMM1YNR015W MSB3P48566 633 aaPredicted RBP12.53□□□□□ -0.4
SMM1YNR015W TSR3Q12094 313 aaKnown RBP12.53□□□□□ -0.4
SMM1YNR015W IMH1Q06704 911 aaKnown RBP12.52□□□□□ -0.41
SMM1YNR015W RTG3P38165 486 aa12.5□□□□□ -0.41
SMM1YNR015W MHP1P43638 1398 aa12.5□□□□□ -0.41
SMM1YNR015W MLP1Q02455 1875 aaKnown RBP12.48□□□□□ -0.41
SMM1YNR015W PDS5Q04264 1277 aa12.48□□□□□ -0.41
SMM1YNR015W SLM3Q12093 417 aa12.47□□□□□ -0.41
SMM1YNR015W YRF1-2P40105 1681 aa12.47□□□□□ -0.41
SMM1YNR015W TCB1Q12466 1186 aa12.45□□□□□ -0.42
SMM1YNR015W YMR074CQ04773 145 aa12.43□□□□□ -0.42
SMM1YNR015W PDI1P17967 522 aaKnown RBP12.42□□□□□ -0.42
SMM1YNR015W IES2P40154 320 aa12.41□□□□□ -0.42
SMM1YNR015W RSF2P46974 1380 aa12.4□□□□□ -0.42
SMM1YNR015W RTF1P53064 558 aa12.39□□□□□ -0.43
SMM1YNR015W TAP42Q04372 366 aa12.39□□□□□ -0.43
SMM1YNR015W GAS4Q08271 471 aa12.39□□□□□ -0.43
SMM1YNR015W YIL177CP40434 1758 aa12.38□□□□□ -0.43
SMM1YNR015W YJL225CP40889 1758 aa12.38□□□□□ -0.43
SMM1YNR015W RPL17AP05740 184 aaKnown RBP12.38□□□□□ -0.43
SMM1YNR015W RPL17BP46990 184 aaKnown RBP12.38□□□□□ -0.43
SMM1YNR015W DPS1P04802 557 aaKnown RBP12.37□□□□□ -0.43
SMM1YNR015W URB1P34241 1764 aaKnown RBP12.36□□□□□ -0.43
SMM1YNR015W AUS1Q08409 1394 aa12.35□□□□□ -0.43
SMM1YNR015W GRX4P32642 244 aa12.35□□□□□ -0.43
SMM1YNR015W YCK3P39962 524 aa12.35□□□□□ -0.43
SMM1YNR015W XKS1P42826 600 aa12.35□□□□□ -0.43
SMM1YNR015W YRF1-3P0CX14 1859 aa12.34□□□□□ -0.43
SMM1YNR015W YRF1-7P0CX15 1859 aa12.34□□□□□ -0.43
SMM1YNR015W YRF1-6P53819 1859 aa12.34□□□□□ -0.43
SMM1YNR015W LEU3P08638 886 aa12.34□□□□□ -0.43
SMM1YNR015W DOT5P40553 215 aa12.34□□□□□ -0.43
SMM1YNR015W HIM1Q06674 414 aa12.34□□□□□ -0.43
SMM1YNR015W YEF3P16521 1044 aaKnown RBP12.3□□□□□ -0.44
SMM1YNR015W ENP1P38333 483 aaKnown RBP12.3□□□□□ -0.44
SMM1YNR015W NST1P53935 1240 aa12.3□□□□□ -0.44
SMM1YNR015W APC1P53886 1748 aa12.3□□□□□ -0.44
SMM1YNR015W ROM2P51862 1356 aaKnown RBP12.3□□□□□ -0.44
SMM1YNR015W YKL133CP36066 463 aa12.29□□□□□ -0.44
SMM1YNR015W FOX2Q02207 900 aaKnown RBP12.29□□□□□ -0.44
SMM1YNR015W FKS3Q04952 1785 aa12.28□□□□□ -0.44
SMM1YNR015W SEC3P33332 1336 aaKnown RBP12.28□□□□□ -0.44
SMM1YNR015W BUD31P25337 157 aaPredicted RBP12.27□□□□□ -0.45
SMM1YNR015W RCR1P38212 213 aa12.27□□□□□ -0.45
SMM1YNR015W RPN11P43588 306 aaKnown RBP12.27□□□□□ -0.45
SMM1YNR015W PSD2P53037 1138 aaKnown RBP12.26□□□□□ -0.45
SMM1YNR015W KAR2P16474 682 aaKnown RBP12.25□□□□□ -0.45
SMM1YNR015W TRK1P12685 1235 aa12.24□□□□□ -0.45
SMM1YNR015W SIR4P11978 1358 aa12.21□□□□□ -0.45
SMM1YNR015W COBP00163 385 aa12.21□□□□□ -0.45
SMM1YNR015W HAA1Q12753 694 aaKnown RBP12.21□□□□□ -0.45
SMM1YNR015W RPO41P13433 1351 aaKnown RBP12.2□□□□□ -0.46
SMM1YNR015W MEC3Q02574 474 aa12.2□□□□□ -0.46
SMM1YNR015W UBP1P25037 809 aa12.19□□□□□ -0.46
SMM1YNR015W YKR075CP36155 307 aa12.19□□□□□ -0.46
SMM1YNR015W NPR2P39923 615 aa12.19□□□□□ -0.46
SMM1YNR015W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.18□□□□□ -0.46not detected
SMM1YNR015W ADE16P54113 591 aaKnown RBP12.18□□□□□ -0.46
SMM1YNR015W YRF1-4O13559 1382 aa12.18□□□□□ -0.46
SMM1YNR015W YJL181WP46987 611 aa12.17□□□□□ -0.46
SMM1YNR015W PAP2P53632 584 aaKnown RBP12.17□□□□□ -0.46
SMM1YNR015W LAM6Q08001 693 aa12.17□□□□□ -0.46
SMM1YNR015W FRK1Q03002 865 aaPredicted RBP12.16□□□□□ -0.46
SMM1YNR015W EDE1P34216 1381 aa12.16□□□□□ -0.46
SMM1YNR015W SPT7P35177 1332 aa12.15□□□□□ -0.46
SMM1YNR015W SNF2P22082 1703 aa12.15□□□□□ -0.46
SMM1YNR015W DSD1P53095 428 aa12.15□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms