RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE1YMR145C NDL1Q06568 189 aa8.66□□□□□ -1.02
NDE1YMR145C MDM38Q08179 573 aa8.66□□□□□ -1.02
NDE1YMR145C PCT1P13259 424 aa8.65□□□□□ -1.02
NDE1YMR145C TCD1P38756 429 aa8.65□□□□□ -1.02
NDE1YMR145C ITC1P53125 1264 aa8.65□□□□□ -1.02
NDE1YMR145C PXR1P53335 271 aaPredicted RBP8.65□□□□□ -1.02
NDE1YMR145C RCF1Q03713 159 aa8.65□□□□□ -1.02
NDE1YMR145C ORM2Q06144 216 aa8.65□□□□□ -1.02
NDE1YMR145C RAD2P07276 1031 aa8.65□□□□□ -1.03
NDE1YMR145C ZUO1P32527 433 aaKnown RBP8.65□□□□□ -1.03
NDE1YMR145C RIM101P33400 625 aa8.65□□□□□ -1.03
NDE1YMR145C ARL1P38116 183 aaKnown RBP8.65□□□□□ -1.03
NDE1YMR145C MTR4P47047 1073 aaKnown RBP8.65□□□□□ -1.03
NDE1YMR145C COG8Q04632 607 aa8.65□□□□□ -1.03
NDE1YMR145C IMH1Q06704 911 aaKnown RBP8.65□□□□□ -1.03
NDE1YMR145C TAF13P11747 167 aa8.64□□□□□ -1.03
NDE1YMR145C CLN1P20437 546 aa8.64□□□□□ -1.03
NDE1YMR145C SWH1P35845 1188 aa8.64□□□□□ -1.03
NDE1YMR145C VPS24P36095 224 aaKnown RBP8.64□□□□□ -1.03
NDE1YMR145C RAD3P06839 778 aa8.63□□□□□ -1.03
NDE1YMR145C PSO2P30620 661 aa8.63□□□□□ -1.03
NDE1YMR145C PUP2P32379 260 aa8.63□□□□□ -1.03
NDE1YMR145C PIM1P36775 1133 aa8.63□□□□□ -1.03
NDE1YMR145C LSP1Q12230 341 aaKnown RBP8.63□□□□□ -1.03
NDE1YMR145C PDR10P51533 1564 aa8.63□□□□□ -1.03
NDE1YMR145C DAL5P15365 543 aa8.62□□□□□ -1.03
NDE1YMR145C SPT5P27692 1063 aaKnown RBP8.62□□□□□ -1.03
NDE1YMR145C TPO2P53283 614 aa8.62□□□□□ -1.03
NDE1YMR145C PHO87P25360 923 aa8.62□□□□□ -1.03
NDE1YMR145C ASF1P32447 279 aa8.62□□□□□ -1.03
NDE1YMR145C MGA2P40578 1113 aa8.62□□□□□ -1.03
NDE1YMR145C YNL050CP53952 270 aa8.62□□□□□ -1.03
NDE1YMR145C SEC39Q12745 709 aa8.62□□□□□ -1.03
NDE1YMR145C VPS5Q92331 675 aa8.62□□□□□ -1.03
NDE1YMR145C YOL087CQ99247 1116 aa8.62□□□□□ -1.03
NDE1YMR145C YKR023WP36119 530 aaKnown RBP8.61□□□□□ -1.03
NDE1YMR145C RTT106P40161 455 aa8.61□□□□□ -1.03
NDE1YMR145C YMR1P47147 688 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
NDE1YMR145C PUS1Q12211 544 aaKnown RBP8.61□□□□□ -1.03
NDE1YMR145C THO2P53552 1597 aaKnown RBP8.6□□□□□ -1.03
NDE1YMR145C NPR3P38742 1146 aa8.6□□□□□ -1.03
NDE1YMR145C TFG1P41895 735 aaPredicted RBP8.6□□□□□ -1.03
NDE1YMR145C PSD2P53037 1138 aaKnown RBP8.6□□□□□ -1.03
NDE1YMR145C ARR1Q06596 294 aa8.6□□□□□ -1.03
NDE1YMR145C GLE1Q12315 538 aa8.6□□□□□ -1.03
NDE1YMR145C TPS3P38426 1054 aaKnown RBP8.59□□□□□ -1.03
NDE1YMR145C SMC4Q12267 1418 aa8.59□□□□□ -1.03
NDE1YMR145C SEC20P28791 383 aa8.59□□□□□ -1.03
NDE1YMR145C SSM4P40318 1319 aa8.58□□□□□ -1.04
NDE1YMR145C IAH1P41734 238 aa8.58□□□□□ -1.04
NDE1YMR145C RAD9P14737 1309 aa8.58□□□□□ -1.04
NDE1YMR145C PSE1P32337 1089 aaKnown RBP8.57□□□□□ -1.04
NDE1YMR145C DSF2P38213 736 aa8.57□□□□□ -1.04
NDE1YMR145C NDC80P40460 691 aa8.57□□□□□ -1.04
NDE1YMR145C YDR341CQ05506 607 aaKnown RBP8.57□□□□□ -1.04
NDE1YMR145C UTP13Q05946 817 aaKnown RBP8.57□□□□□ -1.04
NDE1YMR145C JJJ1P53863 590 aa8.56□□□□□ -1.04
NDE1YMR145C HOS3Q02959 697 aaKnown RBP8.56□□□□□ -1.04
NDE1YMR145C ESC2Q06340 456 aa8.56□□□□□ -1.04
NDE1YMR145C SLP1Q12232 587 aa8.56□□□□□ -1.04
NDE1YMR145C IRC20Q06554 1556 aa8.56□□□□□ -1.04
NDE1YMR145C KEX2P13134 814 aa8.56□□□□□ -1.04
NDE1YMR145C RPL5P26321 297 aaKnown RBP8.56□□□□□ -1.04
NDE1YMR145C SPB4P25808 606 aaPredicted RBP8.55□□□□□ -1.04
NDE1YMR145C VPS27P40343 622 aaKnown RBP8.55□□□□□ -1.04
NDE1YMR145C KIP3P53086 805 aaKnown RBP8.55□□□□□ -1.04
NDE1YMR145C PSR1Q07800 427 aa8.55□□□□□ -1.04
NDE1YMR145C TRM3Q07527 1436 aa8.55□□□□□ -1.04
NDE1YMR145C GCD6P32501 712 aaKnown RBP8.54□□□□□ -1.04
NDE1YMR145C RRB1Q04225 511 aaKnown RBP8.54□□□□□ -1.04
NDE1YMR145C PEX19Q07418 342 aa8.54□□□□□ -1.04
NDE1YMR145C CLF1Q12309 687 aaPredicted RBP8.54□□□□□ -1.04
NDE1YMR145C LAM1P38851 1228 aa8.53□□□□□ -1.04
NDE1YMR145C ATG36P46983 293 aa8.53□□□□□ -1.04
NDE1YMR145C NOP7P53261 605 aaKnown RBP8.53□□□□□ -1.04
NDE1YMR145C SPT6P23615 1451 aaKnown RBP8.53□□□□□ -1.04
NDE1YMR145C TAF2P23255 1407 aa8.53□□□□□ -1.04
NDE1YMR145C SWI6P09959 803 aa8.53□□□□□ -1.04
NDE1YMR145C BRF1P29056 596 aa8.53□□□□□ -1.04
NDE1YMR145C YGL140CP53120 1219 aa8.53□□□□□ -1.04
NDE1YMR145C MRS2Q01926 470 aa8.53□□□□□ -1.04
NDE1YMR145C YMR102CQ03177 834 aa8.53□□□□□ -1.04
NDE1YMR145C SIT1P39980 628 aa8.52□□□□□ -1.05
NDE1YMR145C CCM1P48237 864 aaPredicted RBP8.52□□□□□ -1.05
NDE1YMR145C RAD16P31244 790 aa8.51□□□□□ -1.05
NDE1YMR145C PKH1Q03407 766 aa8.51□□□□□ -1.05
NDE1YMR145C THR4P16120 514 aaKnown RBP8.5□□□□□ -1.05
NDE1YMR145C RIO2P40160 425 aaKnown RBP8.5□□□□□ -1.05
NDE1YMR145C SEC27P41811 889 aaKnown RBP8.5□□□□□ -1.05
NDE1YMR145C OSW7P43611 510 aa8.5□□□□□ -1.05
NDE1YMR145C TEA1P47988 759 aa8.5□□□□□ -1.05
NDE1YMR145C TY1B-DR4Q07793 1604 aa8.5□□□□□ -1.05
NDE1YMR145C NUF2P33895 451 aa8.49□□□□□ -1.05
NDE1YMR145C OLA1P38219 394 aaKnown RBP8.49□□□□□ -1.05
NDE1YMR145C RPT2P40327 437 aaKnown RBP8.49□□□□□ -1.05
NDE1YMR145C APL6P46682 809 aa8.49□□□□□ -1.05
NDE1YMR145C DNM1P54861 757 aa8.49□□□□□ -1.05
NDE1YMR145C SYH1Q02875 849 aaKnown RBP8.49□□□□□ -1.05
NDE1YMR145C SML1Q04964 104 aa8.49□□□□□ -1.05
NDE1YMR145C RAD50P12753 1312 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms