RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	PUS1	Q12211	544 aa	Known RBP	3.43	□□□□□ -1.86
RCO1	YMR075W	YLR326W	Q06170	240 aa	Known RBP	3.42	□□□□□ -1.86
RCO1	YMR075W	YPR204W	Q08995	1032 aa		3.42	□□□□□ -1.86
RCO1	YMR075W	VHR2	P40041	505 aa		3.4	□□□□□ -1.86
RCO1	YMR075W	CAF120	P53836	1060 aa		3.4	□□□□□ -1.86
RCO1	YMR075W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.4	□□□□□ -1.87	not detected
RCO1	YMR075W	RRN7	P40992	514 aa		3.4	□□□□□ -1.87
RCO1	YMR075W	ACO2	P39533	789 aa		3.39	□□□□□ -1.87
RCO1	YMR075W	TUM1	Q08686	304 aa	Known RBP	3.39	□□□□□ -1.87
RCO1	YMR075W	UBP14	P38237	781 aa	Known RBP	3.39	□□□□□ -1.87
RCO1	YMR075W	ICP55	P40051	511 aa		3.39	□□□□□ -1.87
RCO1	YMR075W	YJR115W	P47152	169 aa		3.37	□□□□□ -1.87
RCO1	YMR075W	SRF1	Q12516	437 aa		3.37	□□□□□ -1.87
RCO1	YMR075W	LSB3	P43603	459 aa	Known RBP	3.36	□□□□□ -1.87
RCO1	YMR075W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
RCO1	YMR075W	MET32	Q12041	191 aa		3.35	□□□□□ -1.87
RCO1	YMR075W	PHM7	Q12252	991 aa		3.35	□□□□□ -1.87
RCO1	YMR075W	TY1A-DR4	O74302	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-H	P0C2I4	478 aa	Known RBP	3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-A	P0CX57	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-PR1	P0CX58	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-OR	P0CX59	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-PR2	P0CX60	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-DR5	P0CX65	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-ER2	P0CX66	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-GR3	P0CX67	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-LR1	P0CX68	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-MR2	P0CX69	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-JR2	P47099	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	MSB3	P48566	633 aa	Predicted RBP	3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-DR1	Q03856	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-ML1	Q04706	440 aa	Known RBP	3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-BR	Q12217	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-NL2	Q12470	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	TY1A-GR2	Q12485	440 aa		3.32	□□□□□ -1.88
RCO1	YMR075W	GLY1	P37303	387 aa	Known RBP	3.32	□□□□□ -1.88
RCO1	YMR075W	GAP1	P19145	602 aa	Predicted RBP	3.31	□□□□□ -1.88
RCO1	YMR075W	SCW11	P53189	542 aa		3.31	□□□□□ -1.88
RCO1	YMR075W	SEC2	P17065	759 aa		3.31	□□□□□ -1.88
RCO1	YMR075W	UGA3	P26370	528 aa		3.31	□□□□□ -1.88
RCO1	YMR075W	RTT106	P40161	455 aa		3.31	□□□□□ -1.88
RCO1	YMR075W	HPF1	Q05164	967 aa		3.31	□□□□□ -1.88
RCO1	YMR075W	OPT2	Q06593	877 aa		3.29	□□□□□ -1.88
RCO1	YMR075W	TYW1	Q08960	810 aa	Known RBP	3.29	□□□□□ -1.88
RCO1	YMR075W	DPH6	Q12429	685 aa		3.29	□□□□□ -1.88
RCO1	YMR075W	MIP1	P15801	1254 aa		3.28	□□□□□ -1.89
RCO1	YMR075W	NUP85	P46673	744 aa		3.27	□□□□□ -1.89
RCO1	YMR075W	YIR007W	P40566	764 aa		3.26	□□□□□ -1.89
RCO1	YMR075W	PTK2	P47116	818 aa	Known RBP	3.26	□□□□□ -1.89
RCO1	YMR075W	SET1	P38827	1080 aa	Known RBP	3.26	□□□□□ -1.89
RCO1	YMR075W	SYH1	Q02875	849 aa	Known RBP	3.26	□□□□□ -1.89
RCO1	YMR075W	PUS5	Q06244	254 aa		3.26	□□□□□ -1.89
RCO1	YMR075W	MOD5	P07884	428 aa		3.24	□□□□□ -1.89
RCO1	YMR075W	SBP1	P10080	294 aa	Known RBP	3.24	□□□□□ -1.89
RCO1	YMR075W	KXD1	P53158	218 aa		3.24	□□□□□ -1.89
RCO1	YMR075W	LYS5	P50113	272 aa		3.23	□□□□□ -1.89
RCO1	YMR075W	UBP2	Q01476	1272 aa		3.23	□□□□□ -1.89
RCO1	YMR075W	YDR090C	Q03193	310 aa		3.23	□□□□□ -1.89
RCO1	YMR075W	YPR109W	Q06104	294 aa		3.23	□□□□□ -1.89
RCO1	YMR075W	ORC6	P38826	435 aa		3.22	□□□□□ -1.89
RCO1	YMR075W	MVP1	P40959	511 aa	Known RBP	3.21	□□□□□ -1.89
RCO1	YMR075W	LSC2	P53312	427 aa		3.21	□□□□□ -1.89
RCO1	YMR075W	KEX2	P13134	814 aa		3.21	□□□□□ -1.9
RCO1	YMR075W	TY1A-BL	Q12266	440 aa		3.21	□□□□□ -1.9
RCO1	YMR075W	PAC1	P39946	494 aa	Known RBP	3.2	□□□□□ -1.9
RCO1	YMR075W	REF2	P42073	533 aa	Predicted RBP	3.2	□□□□□ -1.9
RCO1	YMR075W	NSG2	P53898	299 aa		3.2	□□□□□ -1.9
RCO1	YMR075W	MAK21	Q12176	1025 aa	Known RBP	3.2	□□□□□ -1.9
RCO1	YMR075W	ARG82	P07250	355 aa		3.19	□□□□□ -1.9
RCO1	YMR075W	TPD3	P31383	635 aa		3.18	□□□□□ -1.9
RCO1	YMR075W	KIP2	P28743	706 aa		3.18	□□□□□ -1.9
RCO1	YMR075W	RTF1	P53064	558 aa		3.18	□□□□□ -1.9
RCO1	YMR075W	AI1	P03875	834 aa		3.16	□□□□□ -1.9
RCO1	YMR075W	CLB5	P30283	435 aa		3.16	□□□□□ -1.9
RCO1	YMR075W	TUB4	P53378	473 aa		3.16	□□□□□ -1.9
RCO1	YMR075W	CCT8	P47079	568 aa	Known RBP	3.16	□□□□□ -1.9
RCO1	YMR075W	RGR1	P19263	1082 aa		3.15	□□□□□ -1.91
RCO1	YMR075W	HXT10	P43581	546 aa		3.14	□□□□□ -1.91
RCO1	YMR075W	ERF2	Q06551	359 aa		3.14	□□□□□ -1.91
RCO1	YMR075W	YPR053C	Q6Q5F3	151 aa		3.14	□□□□□ -1.91
RCO1	YMR075W	IXR1	P33417	597 aa		3.13	□□□□□ -1.91
RCO1	YMR075W	ROG3	P43602	733 aa		3.13	□□□□□ -1.91
RCO1	YMR075W	JJJ3	P47138	172 aa		3.13	□□□□□ -1.91
RCO1	YMR075W	THI72	Q08579	599 aa		3.13	□□□□□ -1.91
RCO1	YMR075W	MRT4	P33201	236 aa	Known RBP	3.12	□□□□□ -1.91
RCO1	YMR075W	MDJ1	P35191	511 aa		3.12	□□□□□ -1.91
RCO1	YMR075W	YNL115C	P53925	644 aa		3.12	□□□□□ -1.91
RCO1	YMR075W	TY1A-MR1	Q04215	440 aa		3.12	□□□□□ -1.91
RCO1	YMR075W	COX6	P00427	148 aa		3.12	□□□□□ -1.91
RCO1	YMR075W	AGE1	Q04412	482 aa		3.12	□□□□□ -1.91
RCO1	YMR075W	OSH7	P38755	437 aa		3.1	□□□□□ -1.91
RCO1	YMR075W	AAD14	P42884	376 aa		3.1	□□□□□ -1.91
RCO1	YMR075W	TCB1	Q12466	1186 aa		3.1	□□□□□ -1.91
RCO1	YMR075W	ALR1	Q08269	859 aa		3.09	□□□□□ -1.91
RCO1	YMR075W	YJR098C	P47139	656 aa		3.08	□□□□□ -1.92
RCO1	YMR075W	PDC1	P06169	563 aa	Known RBP	3.07	□□□□□ -1.92
RCO1	YMR075W	TBF1	Q02457	562 aa		3.07	□□□□□ -1.92
RCO1	YMR075W	PSE1	P32337	1089 aa	Known RBP	3.06	□□□□□ -1.92
RCO1	YMR075W	IRC24	P40580	263 aa		3.06	□□□□□ -1.92
RCO1	YMR075W	ADE12	P80210	433 aa	Known RBP	3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 129.1 ms