RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C NCR1Q12200 1170 aa8.04□□□□□ -1.12
CCS1YMR038C LEO1P38439 464 aa8.02□□□□□ -1.13
CCS1YMR038C PAN1P32521 1480 aa8.01□□□□□ -1.13
CCS1YMR038C ORC6P38826 435 aa8.01□□□□□ -1.13
CCS1YMR038C YNR021WP53723 404 aaKnown RBP8.01□□□□□ -1.13
CCS1YMR038C YDL129WQ07555 291 aa8□□□□□ -1.13
CCS1YMR038C RPN1P38764 993 aaKnown RBP7.99□□□□□ -1.13
CCS1YMR038C CDC73Q06697 393 aa7.99□□□□□ -1.13
CCS1YMR038C TY2B-BQ12491 1770 aa7.99□□□□□ -1.13
CCS1YMR038C TFG1P41895 735 aaPredicted RBP7.98□□□□□ -1.13
CCS1YMR038C TY1B-HO13535 1793 aa7.97□□□□□ -1.13
CCS1YMR038C TY1B-DR5P0C2I2 1755 aa7.97□□□□□ -1.13
CCS1YMR038C TY1B-DR6P0C2I3 1755 aa7.97□□□□□ -1.13
CCS1YMR038C TY1B-LR2P0C2I5 1755 aa7.97□□□□□ -1.13
CCS1YMR038C TY1B-LR3P0C2I6 1755 aaKnown RBP7.97□□□□□ -1.13
CCS1YMR038C TY1B-PR1P0C2I9 1755 aaKnown RBP7.97□□□□□ -1.13
CCS1YMR038C TY1B-PR2P0C2J0 1756 aa7.97□□□□□ -1.13
CCS1YMR038C TY1B-PR3P0C2J1 1755 aaKnown RBP7.97□□□□□ -1.13
CCS1YMR038C TY1B-JR1P47098 1755 aa7.97□□□□□ -1.13
CCS1YMR038C TY1B-ML2Q03434 1755 aaKnown RBP7.97□□□□□ -1.13
CCS1YMR038C TY1B-ER1Q03612 1755 aa7.97□□□□□ -1.13
CCS1YMR038C TY1B-ML1Q04711 1755 aaKnown RBP7.97□□□□□ -1.13
CCS1YMR038C TY1B-GR2Q12269 1755 aa7.97□□□□□ -1.13
CCS1YMR038C TY1B-OLQ12273 1755 aa7.97□□□□□ -1.13
CCS1YMR038C TY1B-PLQ12414 1755 aaKnown RBP7.97□□□□□ -1.13
CCS1YMR038C GAP1P19145 602 aaPredicted RBP7.97□□□□□ -1.13
CCS1YMR038C TY1B-DR3Q99231 1755 aa7.97□□□□□ -1.13
CCS1YMR038C MPC54Q08550 464 aa7.96□□□□□ -1.14
CCS1YMR038C DRS2P39524 1355 aa7.96□□□□□ -1.14
CCS1YMR038C PSE1P32337 1089 aaKnown RBP7.95□□□□□ -1.14
CCS1YMR038C GLC3P32775 704 aa7.95□□□□□ -1.14
CCS1YMR038C SAP30P38429 201 aa7.93□□□□□ -1.14
CCS1YMR038C PEX29Q03370 554 aa7.93□□□□□ -1.14
CCS1YMR038C DPL1Q05567 589 aa7.93□□□□□ -1.14
CCS1YMR038C YDR344CQ05510 147 aa7.92□□□□□ -1.14
CCS1YMR038C TOP2P06786 1428 aaKnown RBP7.92□□□□□ -1.14
CCS1YMR038C TRM732Q03496 1420 aa7.92□□□□□ -1.14
CCS1YMR038C RPP1BP10622 106 aaKnown RBP7.9□□□□□ -1.14
CCS1YMR038C RGR1P19263 1082 aa7.9□□□□□ -1.14
CCS1YMR038C MVP1P40959 511 aaKnown RBP7.9□□□□□ -1.14
CCS1YMR038C CSC1Q06538 782 aa7.9□□□□□ -1.14
CCS1YMR038C AIM7Q12156 149 aa7.9□□□□□ -1.14
CCS1YMR038C MMS22Q06164 1454 aa7.89□□□□□ -1.15
CCS1YMR038C BMT6Q12291 365 aa7.88□□□□□ -1.15
CCS1YMR038C NMA111P53920 997 aa7.87□□□□□ -1.15
CCS1YMR038C IRC20Q06554 1556 aa7.87□□□□□ -1.15
CCS1YMR038C YJL171CP46992 396 aa7.86□□□□□ -1.15
CCS1YMR038C ARH1P48360 493 aa7.86□□□□□ -1.15
CCS1YMR038C TFB4Q12004 338 aa7.86□□□□□ -1.15
CCS1YMR038C ISU2Q12056 156 aa7.86□□□□□ -1.15
CCS1YMR038C YRF1-1P0CX20 1796 aa7.85□□□□□ -1.15
CCS1YMR038C YRF1-5P0CX21 1796 aa7.85□□□□□ -1.15
CCS1YMR038C YRF1-8P0CX22 1796 aa7.85□□□□□ -1.15
CCS1YMR038C KIN1P13185 1064 aa7.85□□□□□ -1.15
CCS1YMR038C ATF2P53296 535 aa7.85□□□□□ -1.15
CCS1YMR038C VPS15P22219 1454 aa7.83□□□□□ -1.16
CCS1YMR038C HAP5Q02516 242 aa7.83□□□□□ -1.16
CCS1YMR038C YPR109WQ06104 294 aa7.83□□□□□ -1.16
CCS1YMR038C POL1P13382 1468 aa7.82□□□□□ -1.16
CCS1YMR038C NUP159P40477 1460 aa7.82□□□□□ -1.16
CCS1YMR038C PEX21P50091 288 aa7.82□□□□□ -1.16
CCS1YMR038C TUM1Q08686 304 aaKnown RBP7.81□□□□□ -1.16
CCS1YMR038C TY1B-JR2P47100 1755 aaKnown RBP7.81□□□□□ -1.16
CCS1YMR038C TY1B-ER2Q03619 1755 aa7.81□□□□□ -1.16
CCS1YMR038C TY1B-MR1Q04214 1755 aa7.81□□□□□ -1.16
CCS1YMR038C TY1B-MR2Q04670 1755 aaKnown RBP7.81□□□□□ -1.16
CCS1YMR038C TY1B-LR1Q12088 1755 aaKnown RBP7.81□□□□□ -1.16
CCS1YMR038C TY1B-NL1Q12112 1755 aa7.81□□□□□ -1.16
CCS1YMR038C TY1B-GR1Q12141 1755 aa7.81□□□□□ -1.16
CCS1YMR038C TY1B-BLQ12490 1755 aa7.81□□□□□ -1.16
CCS1YMR038C TEA1P47988 759 aa7.8□□□□□ -1.16
CCS1YMR038C YRR1Q12172 810 aa7.8□□□□□ -1.16
CCS1YMR038C DNF2Q12675 1612 aa7.8□□□□□ -1.16
CCS1YMR038C STU1P38198 1513 aa7.79□□□□□ -1.16
CCS1YMR038C ELP4Q02884 456 aaKnown RBP7.79□□□□□ -1.16
CCS1YMR038C CLB5P30283 435 aa7.78□□□□□ -1.16
CCS1YMR038C YOR1P53049 1477 aa7.78□□□□□ -1.16
CCS1YMR038C PDR1P12383 1068 aa7.77□□□□□ -1.17
CCS1YMR038C PRE3P38624 215 aa7.77□□□□□ -1.17
CCS1YMR038C SPP41P38904 1435 aa7.77□□□□□ -1.17
CCS1YMR038C SMC4Q12267 1418 aa7.77□□□□□ -1.17
CCS1YMR038C NTE1Q04958 1679 aa7.76□□□□□ -1.17
CCS1YMR038C BNI4P53858 892 aa7.76□□□□□ -1.17
CCS1YMR038C RAM1P22007 431 aa7.74□□□□□ -1.17
CCS1YMR038C SPT23P35210 1082 aa7.74□□□□□ -1.17
CCS1YMR038C NIS1P53939 407 aa7.74□□□□□ -1.17
CCS1YMR038C RPO21P04050 1733 aaKnown RBP7.74□□□□□ -1.17
CCS1YMR038C CHL1P22516 861 aaPredicted RBP7.73□□□□□ -1.17
CCS1YMR038C VTH1P40438 1549 aa7.73□□□□□ -1.17
CCS1YMR038C VTH2P40890 1549 aa7.73□□□□□ -1.17
CCS1YMR038C TSC11P40061 1430 aa7.71□□□□□ -1.17
CCS1YMR038C NUD1P32336 851 aa7.71□□□□□ -1.18
CCS1YMR038C GUA1P38625 525 aaKnown RBP7.71□□□□□ -1.18
CCS1YMR038C YPR015CQ12531 247 aa7.71□□□□□ -1.18
CCS1YMR038C NUP170P38181 1502 aa7.7□□□□□ -1.18
CCS1YMR038C FPK1P53739 893 aa7.7□□□□□ -1.18
CCS1YMR038C SIT4P20604 311 aa7.69□□□□□ -1.18
CCS1YMR038C PTC2P39966 464 aaKnown RBP7.69□□□□□ -1.18
CCS1YMR038C STR2P47164 639 aa7.69□□□□□ -1.18
CCS1YMR038C YOR093CQ12275 1648 aa7.68□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms