RNA–Protein interactions for RNA: YML061C

PIF1, Transcript of DNA helicase, potent G-quadruplex DNA binder/unwinder, yeastyeast

Gene PIF1, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PIF1YML061C ATG36P46983 293 aa7.11□□□□□ -1.27
PIF1YML061C TY3B-IQ7LHG5 1498 aaKnown RBP7.09□□□□□ -1.27
PIF1YML061C TOP1P04786 769 aa7.09□□□□□ -1.27
PIF1YML061C TRK1P12685 1235 aa7.09□□□□□ -1.27
PIF1YML061C EBP2P36049 427 aaKnown RBP7.09□□□□□ -1.27
PIF1YML061C AIM44Q99299 758 aa7.09□□□□□ -1.28
PIF1YML061C NUP188P52593 1655 aaKnown RBP7.08□□□□□ -1.28
PIF1YML061C BNI1P41832 1953 aa7.06□□□□□ -1.28
PIF1YML061C ALD4P46367 519 aaKnown RBP7.06□□□□□ -1.28
PIF1YML061C KRE5P22023 1365 aa7.05□□□□□ -1.28
PIF1YML061C SWE1P32944 819 aa7.05□□□□□ -1.28
PIF1YML061C YEF3P16521 1044 aaKnown RBP7.04□□□□□ -1.28
PIF1YML061C RCM1P53972 490 aa7.03□□□□□ -1.28
PIF1YML061C TRM3Q07527 1436 aa7.03□□□□□ -1.28
PIF1YML061C MPP10P47083 593 aaKnown RBP7.02□□□□□ -1.29
PIF1YML061C YDL144CQ07589 356 aa7.02□□□□□ -1.29
PIF1YML061C RVB2Q12464 471 aaKnown RBP7.02□□□□□ -1.29
PIF1YML061C RIA1P53893 1110 aa7.01□□□□□ -1.29
PIF1YML061C MLP1Q02455 1875 aaKnown RBP7.01□□□□□ -1.29
PIF1YML061C PPH3P32345 308 aa7□□□□□ -1.29
PIF1YML061C MDG1P53885 366 aa7□□□□□ -1.29
PIF1YML061C FKH1P40466 484 aa7□□□□□ -1.29
PIF1YML061C RPS0BP46654 252 aaKnown RBP6.99□□□□□ -1.29
PIF1YML061C MRX12P47084 519 aa6.99□□□□□ -1.29
PIF1YML061C RRP46P53256 223 aaPredicted RBP6.97□□□□□ -1.29
PIF1YML061C HIM1Q06674 414 aa6.97□□□□□ -1.29
PIF1YML061C RLP24Q07915 199 aaKnown RBP6.97□□□□□ -1.29
PIF1YML061C BCK1Q01389 1478 aa6.97□□□□□ -1.29
PIF1YML061C SUI2P20459 304 aaKnown RBP6.97□□□□□ -1.29
PIF1YML061C YML133CQ03099 1374 aa6.97□□□□□ -1.29
PIF1YML061C YLL067CQ07888 1374 aa6.97□□□□□ -1.29
PIF1YML061C YLL066CQ99208 1374 aa6.97□□□□□ -1.29
PIF1YML061C PAP2P53632 584 aaKnown RBP6.96□□□□□ -1.3
PIF1YML061C RLF2Q12495 606 aa6.95□□□□□ -1.3
PIF1YML061C VPS27P40343 622 aaKnown RBP6.94□□□□□ -1.3
PIF1YML061C LAM6Q08001 693 aa6.94□□□□□ -1.3
PIF1YML061C CSE4P36012 229 aa6.93□□□□□ -1.3
PIF1YML061C GAS4Q08271 471 aa6.93□□□□□ -1.3
PIF1YML061C CAB3P36076 571 aa6.93□□□□□ -1.3
PIF1YML061C RTR1P40084 226 aaPredicted RBP6.93□□□□□ -1.3
PIF1YML061C TPO2P53283 614 aa6.92□□□□□ -1.3
PIF1YML061C KAR2P16474 682 aaKnown RBP6.92□□□□□ -1.3
PIF1YML061C CDC45Q08032 650 aa6.92□□□□□ -1.3
PIF1YML061C DAL5P15365 543 aa6.91□□□□□ -1.3
PIF1YML061C RPC31P17890 251 aa6.91□□□□□ -1.3
PIF1YML061C TPD3P31383 635 aa6.91□□□□□ -1.3
PIF1YML061C NOP8Q08287 484 aaPredicted RBP6.91□□□□□ -1.3
PIF1YML061C PSH1Q12161 406 aa6.9□□□□□ -1.3
PIF1YML061C RPS24AP0CX31 135 aaKnown RBP6.9□□□□□ -1.31
PIF1YML061C RPS24BP0CX32 135 aaKnown RBP6.9□□□□□ -1.31
PIF1YML061C SAP155P43612 1002 aa6.9□□□□□ -1.31
PIF1YML061C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
PIF1YML061C THI22Q06490 572 aa6.88□□□□□ -1.31
PIF1YML061C CPS1P27614 576 aa6.87□□□□□ -1.31
PIF1YML061C MAK10Q02197 733 aa6.87□□□□□ -1.31
PIF1YML061C LEU2P04173 364 aaPredicted RBP6.86□□□□□ -1.31
PIF1YML061C RTT109Q07794 436 aa6.86□□□□□ -1.31
PIF1YML061C GIN4Q12263 1142 aa6.86□□□□□ -1.31
PIF1YML061C PRD1P25375 712 aa6.86□□□□□ -1.31
PIF1YML061C FPR3P38911 411 aaKnown RBP6.86□□□□□ -1.31
PIF1YML061C YBR287WP38355 427 aa6.85□□□□□ -1.31
PIF1YML061C YNR029CP53729 429 aaKnown RBP6.85□□□□□ -1.31
PIF1YML061C DPS1P04802 557 aaKnown RBP6.84□□□□□ -1.31
PIF1YML061C AUS1Q08409 1394 aa6.84□□□□□ -1.31
PIF1YML061C PDI1P17967 522 aaKnown RBP6.84□□□□□ -1.31
PIF1YML061C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
PIF1YML061C RPP0P05317 312 aaKnown RBP6.83□□□□□ -1.32
PIF1YML061C YML020WQ03722 664 aa6.83□□□□□ -1.32
PIF1YML061C ISW1P38144 1129 aa6.82□□□□□ -1.32
PIF1YML061C DNF3Q12674 1656 aa6.81□□□□□ -1.32
PIF1YML061C SCT1P32784 759 aa6.81□□□□□ -1.32
PIF1YML061C NUG1P40010 520 aaKnown RBP6.81□□□□□ -1.32
PIF1YML061C YIL092WP40497 633 aa6.81□□□□□ -1.32
PIF1YML061C HEF3P53978 1044 aaKnown RBP6.81□□□□□ -1.32
PIF1YML061C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
PIF1YML061C PUF6Q04373 656 aaKnown RBP6.8□□□□□ -1.32
PIF1YML061C SNF2P22082 1703 aa6.8□□□□□ -1.32
PIF1YML061C PSK1P31374 1356 aa6.8□□□□□ -1.32
PIF1YML061C RAD2P07276 1031 aa6.8□□□□□ -1.32
PIF1YML061C MTR4P47047 1073 aaKnown RBP6.79□□□□□ -1.32
PIF1YML061C POL32P47110 350 aa6.79□□□□□ -1.32
PIF1YML061C ILV3P39522 585 aaKnown RBP6.79□□□□□ -1.32
PIF1YML061C RTF1P53064 558 aa6.79□□□□□ -1.32
PIF1YML061C OPY1P38271 328 aa6.78□□□□□ -1.32
PIF1YML061C BRL1P38770 471 aa6.78□□□□□ -1.32
PIF1YML061C TAP42Q04372 366 aa6.78□□□□□ -1.32
PIF1YML061C FAR11P53917 953 aa6.77□□□□□ -1.33
PIF1YML061C IME2P32581 645 aa6.77□□□□□ -1.33
PIF1YML061C RRT14P40470 206 aa6.77□□□□□ -1.33
PIF1YML061C AKL1P38080 1108 aaKnown RBP6.76□□□□□ -1.33
PIF1YML061C THI12P42883 340 aa6.76□□□□□ -1.33
PIF1YML061C THI5P43534 340 aa6.76□□□□□ -1.33
PIF1YML061C THI11P47183 340 aa6.76□□□□□ -1.33
PIF1YML061C THI13Q07748 340 aa6.76□□□□□ -1.33
PIF1YML061C MNN4P36044 1178 aa6.76□□□□□ -1.33
PIF1YML061C YGR122WP53272 402 aa6.76□□□□□ -1.33
PIF1YML061C SUB1P54000 292 aaKnown RBP6.76□□□□□ -1.33
PIF1YML061C USO1P25386 1790 aa6.76□□□□□ -1.33
PIF1YML061C HSP104P31539 908 aaKnown RBP6.75□□□□□ -1.33
PIF1YML061C DSD1P53095 428 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms