RNA–Protein interactions for RNA: YML031W

NDC1, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene NDC1, Length 1,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC1YML031W BUD31P25337 157 aaPredicted RBP7.46□□□□□ -1.21
NDC1YML031W PRP45P28004 379 aaPredicted RBP7.43□□□□□ -1.22
NDC1YML031W NAP1P25293 417 aaKnown RBP7.42□□□□□ -1.22
NDC1YML031W TAF5P38129 798 aa7.41□□□□□ -1.22
NDC1YML031W CPS1P27614 576 aa7.4□□□□□ -1.23
NDC1YML031W NOP7P53261 605 aaKnown RBP7.4□□□□□ -1.23
NDC1YML031W UBP1P25037 809 aa7.38□□□□□ -1.23
NDC1YML031W TY4B-HP0C2J7 1802 aa7.37□□□□□ -1.23
NDC1YML031W TY4B-JP47024 1803 aa7.37□□□□□ -1.23
NDC1YML031W LEU3P08638 886 aa7.37□□□□□ -1.23
NDC1YML031W PRP5P21372 849 aaPredicted RBP7.37□□□□□ -1.23
NDC1YML031W RCM1P53972 490 aa7.37□□□□□ -1.23
NDC1YML031W TAF8Q03750 510 aa7.37□□□□□ -1.23
NDC1YML031W URB1P34241 1764 aaKnown RBP7.34□□□□□ -1.23
NDC1YML031W ESL2P36168 1195 aa7.34□□□□□ -1.23
NDC1YML031W RPN11P43588 306 aaKnown RBP7.33□□□□□ -1.24
NDC1YML031W PSK1P31374 1356 aa7.32□□□□□ -1.24
NDC1YML031W EDE1P34216 1381 aa7.32□□□□□ -1.24
NDC1YML031W PPH3P32345 308 aa7.32□□□□□ -1.24
NDC1YML031W YBL086CP38177 466 aa7.31□□□□□ -1.24
NDC1YML031W MSB3P48566 633 aaPredicted RBP7.31□□□□□ -1.24
NDC1YML031W ADE6P38972 1358 aaKnown RBP7.31□□□□□ -1.24
NDC1YML031W DOT5P40553 215 aa7.31□□□□□ -1.24
NDC1YML031W IES2P40154 320 aa7.3□□□□□ -1.24
NDC1YML031W GTT3P39996 337 aa7.29□□□□□ -1.24
NDC1YML031W ROM2P51862 1356 aaKnown RBP7.29□□□□□ -1.24
NDC1YML031W UGA2P38067 497 aa7.29□□□□□ -1.24
NDC1YML031W FKS3Q04952 1785 aa7.28□□□□□ -1.24
NDC1YML031W TCB1Q12466 1186 aa7.28□□□□□ -1.24
NDC1YML031W RSF2P46974 1380 aa7.27□□□□□ -1.25
NDC1YML031W YJL181WP46987 611 aa7.27□□□□□ -1.25
NDC1YML031W FOX2Q02207 900 aaKnown RBP7.26□□□□□ -1.25
NDC1YML031W NPR2P39923 615 aa7.26□□□□□ -1.25
NDC1YML031W SSA1P10591 642 aaKnown RBP7.25□□□□□ -1.25
NDC1YML031W YEF3P16521 1044 aaKnown RBP7.25□□□□□ -1.25
NDC1YML031W ALD2P47771 506 aa7.25□□□□□ -1.25
NDC1YML031W LYS4P49367 693 aaPredicted RBP7.25□□□□□ -1.25
NDC1YML031W YRF1-3P0CX14 1859 aa7.24□□□□□ -1.25
NDC1YML031W YRF1-7P0CX15 1859 aa7.24□□□□□ -1.25
NDC1YML031W YRF1-6P53819 1859 aa7.24□□□□□ -1.25
NDC1YML031W SSA2P10592 639 aaKnown RBP7.24□□□□□ -1.25
NDC1YML031W SLM3Q12093 417 aa7.24□□□□□ -1.25
NDC1YML031W LAM6Q08001 693 aa7.23□□□□□ -1.25
NDC1YML031W SPE2P21182 396 aa7.22□□□□□ -1.25
NDC1YML031W PRP40P33203 583 aaKnown RBP7.22□□□□□ -1.25
NDC1YML031W PRP43P53131 767 aaKnown RBP7.21□□□□□ -1.26
NDC1YML031W ENP1P38333 483 aaKnown RBP7.2□□□□□ -1.26
NDC1YML031W MTR4P47047 1073 aaKnown RBP7.2□□□□□ -1.26
NDC1YML031W LEU2P04173 364 aaPredicted RBP7.2□□□□□ -1.26
NDC1YML031W CSE4P36012 229 aa7.2□□□□□ -1.26
NDC1YML031W YKL133CP36066 463 aa7.2□□□□□ -1.26
NDC1YML031W CTH1P47976 325 aa7.19□□□□□ -1.26
NDC1YML031W KIP3P53086 805 aaKnown RBP7.19□□□□□ -1.26
NDC1YML031W COBP00163 385 aa7.18□□□□□ -1.26
NDC1YML031W RPS24AP0CX31 135 aaKnown RBP7.18□□□□□ -1.26
NDC1YML031W RPS24BP0CX32 135 aaKnown RBP7.18□□□□□ -1.26
NDC1YML031W YKR075CP36155 307 aa7.17□□□□□ -1.26
NDC1YML031W XKS1P42826 600 aa7.17□□□□□ -1.26
NDC1YML031W APC1P53886 1748 aa7.17□□□□□ -1.26
NDC1YML031W YIL177CP40434 1758 aa7.16□□□□□ -1.26
NDC1YML031W YJL225CP40889 1758 aa7.16□□□□□ -1.26
NDC1YML031W CHZ1P40019 153 aaPredicted RBP7.16□□□□□ -1.26
NDC1YML031W YRF1-4O13559 1382 aa7.15□□□□□ -1.26
NDC1YML031W SPT7P35177 1332 aa7.13□□□□□ -1.27
NDC1YML031W YLR419WQ06698 1435 aaKnown RBP7.11□□□□□ -1.27
NDC1YML031W BDF1P35817 686 aa7.11□□□□□ -1.27
NDC1YML031W SNF2P22082 1703 aa7.1□□□□□ -1.27
NDC1YML031W MEC3Q02574 474 aa7.1□□□□□ -1.27
NDC1YML031W SCT1P32784 759 aa7.09□□□□□ -1.27
NDC1YML031W ALD3P54114 506 aa7.09□□□□□ -1.27
NDC1YML031W FRK1Q03002 865 aaPredicted RBP7.09□□□□□ -1.27
NDC1YML031W YCK3P39962 524 aa7.09□□□□□ -1.27
NDC1YML031W YML133CQ03099 1374 aa7.09□□□□□ -1.27
NDC1YML031W YLL067CQ07888 1374 aa7.09□□□□□ -1.27
NDC1YML031W YLL066CQ99208 1374 aa7.09□□□□□ -1.27
NDC1YML031W SIR4P11978 1358 aa7.08□□□□□ -1.28
NDC1YML031W RPG1P38249 964 aaKnown RBP7.08□□□□□ -1.28
NDC1YML031W DPS1P04802 557 aaKnown RBP7.07□□□□□ -1.28
NDC1YML031W MSB4Q12317 492 aa7.07□□□□□ -1.28
NDC1YML031W RCR1P38212 213 aa7.06□□□□□ -1.28
NDC1YML031W ADE16P54113 591 aaKnown RBP7.06□□□□□ -1.28
NDC1YML031W ORC1P54784 914 aaPredicted RBP7.06□□□□□ -1.28
NDC1YML031W RIM15P43565 1770 aa7.05□□□□□ -1.28
NDC1YML031W GAS4Q08271 471 aa7.05□□□□□ -1.28
NDC1YML031W RTF1P53064 558 aa7.04□□□□□ -1.28
NDC1YML031W RRD1P40454 393 aaKnown RBP7.04□□□□□ -1.28
NDC1YML031W BUG1Q12191 341 aa7.04□□□□□ -1.28
NDC1YML031W RPO41P13433 1351 aaKnown RBP7.03□□□□□ -1.28
NDC1YML031W PDI1P17967 522 aaKnown RBP7.03□□□□□ -1.28
NDC1YML031W ATG13Q06628 738 aa7.03□□□□□ -1.28
NDC1YML031W SAP155P43612 1002 aa7.02□□□□□ -1.29
NDC1YML031W MLP1Q02455 1875 aaKnown RBP7.02□□□□□ -1.29
NDC1YML031W EAF6P47128 113 aa7.02□□□□□ -1.29
NDC1YML031W RAD4P14736 754 aa7.01□□□□□ -1.29
NDC1YML031W UTP22P53254 1237 aaPredicted RBP7.01□□□□□ -1.29
NDC1YML031W TOS1P38288 455 aa7□□□□□ -1.29
NDC1YML031W FKH1P40466 484 aa7□□□□□ -1.29
NDC1YML031W GRE2Q12068 342 aaKnown RBP7□□□□□ -1.29
NDC1YML031W GRX1P25373 110 aaKnown RBP6.99□□□□□ -1.29
NDC1YML031W MSN5P52918 1224 aa6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms