RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C KNS1P32350 737 aaPredicted RBP15.06■□□□□ 0
BDF1YLR399C NOT3P06102 836 aaKnown RBP15.05■□□□□ -0
BDF1YLR399C EDE1P34216 1381 aa15.05■□□□□ -0
BDF1YLR399C QCR6P00127 147 aa15.04■□□□□ -0
BDF1YLR399C RAD2P07276 1031 aa15.04■□□□□ -0
BDF1YLR399C SPE2P21182 396 aa15.04■□□□□ -0
BDF1YLR399C DOP1Q03921 1698 aa15.04■□□□□ -0
BDF1YLR399C YEF3P16521 1044 aaKnown RBP15.04■□□□□ -0
BDF1YLR399C YPP1P46951 817 aa15.04■□□□□ -0
BDF1YLR399C RPA190P10964 1664 aaKnown RBP15.02■□□□□ -0
BDF1YLR399C IOC4Q04213 475 aa15.02□□□□□ -0.01
BDF1YLR399C RLF2Q12495 606 aa15□□□□□ -0.01
BDF1YLR399C DAL5P15365 543 aa14.99□□□□□ -0.01
BDF1YLR399C SCT1P32784 759 aa14.98□□□□□ -0.01
BDF1YLR399C NOP58Q12499 511 aaKnown RBP14.97□□□□□ -0.01
BDF1YLR399C CHC1P22137 1653 aaKnown RBP14.97□□□□□ -0.01
BDF1YLR399C SAP155P43612 1002 aa14.96□□□□□ -0.02
BDF1YLR399C POL32P47110 350 aa14.96□□□□□ -0.02
BDF1YLR399C TEA1P47988 759 aa14.96□□□□□ -0.02
BDF1YLR399C TRM3Q07527 1436 aa14.95□□□□□ -0.02
BDF1YLR399C LSP1Q12230 341 aaKnown RBP14.95□□□□□ -0.02
BDF1YLR399C YIL092WP40497 633 aa14.94□□□□□ -0.02
BDF1YLR399C MLP1Q02455 1875 aaKnown RBP14.94□□□□□ -0.02
BDF1YLR399C NAP1P25293 417 aaKnown RBP14.93□□□□□ -0.02
BDF1YLR399C AVT3P36062 692 aa14.93□□□□□ -0.02
BDF1YLR399C FKH1P40466 484 aa14.93□□□□□ -0.02
BDF1YLR399C SNF2P22082 1703 aa14.93□□□□□ -0.02
BDF1YLR399C BNR1P40450 1375 aa14.93□□□□□ -0.02
BDF1YLR399C NUP192P47054 1683 aa14.91□□□□□ -0.02
BDF1YLR399C CHZ1P40019 153 aaPredicted RBP14.91□□□□□ -0.02
BDF1YLR399C RRP46P53256 223 aaPredicted RBP14.91□□□□□ -0.02
BDF1YLR399C RTR1P40084 226 aaPredicted RBP14.9□□□□□ -0.02
BDF1YLR399C YGR130CP53278 816 aa14.89□□□□□ -0.03
BDF1YLR399C VMR1P38735 1592 aa14.89□□□□□ -0.03
BDF1YLR399C MTC1P47018 478 aaKnown RBP14.88□□□□□ -0.03
BDF1YLR399C TPD3P31383 635 aa14.88□□□□□ -0.03
BDF1YLR399C HAP1P0CE41 1502 aa14.86□□□□□ -0.03
BDF1YLR399C YAP3P38749 330 aa14.86□□□□□ -0.03
BDF1YLR399C BUD27P43573 796 aaKnown RBP RIP-Chip data14.86□□□□□ -0.03not detected
BDF1YLR399C ITC1P53125 1264 aa14.86□□□□□ -0.03
BDF1YLR399C PUF6Q04373 656 aaKnown RBP14.85□□□□□ -0.03
BDF1YLR399C IML1P47170 1584 aa14.83□□□□□ -0.03
BDF1YLR399C URN1Q06525 465 aaKnown RBP14.82□□□□□ -0.04
BDF1YLR399C TAF8Q03750 510 aa14.8□□□□□ -0.04
BDF1YLR399C THI22Q06490 572 aa14.8□□□□□ -0.04
BDF1YLR399C KRE5P22023 1365 aa14.79□□□□□ -0.04
BDF1YLR399C CSE4P36012 229 aa14.79□□□□□ -0.04
BDF1YLR399C RSC1P53236 928 aa14.78□□□□□ -0.04
BDF1YLR399C LCD1Q04377 747 aa14.78□□□□□ -0.04
BDF1YLR399C SRS2P12954 1174 aa14.78□□□□□ -0.04
BDF1YLR399C SEC7P11075 2009 aaKnown RBP14.76□□□□□ -0.05
BDF1YLR399C SPT21P35209 758 aa14.76□□□□□ -0.05
BDF1YLR399C PRD1P25375 712 aa14.75□□□□□ -0.05
BDF1YLR399C HEF3P53978 1044 aaKnown RBP14.75□□□□□ -0.05
BDF1YLR399C COG8Q04632 607 aa14.74□□□□□ -0.05
BDF1YLR399C MDG1P53885 366 aa14.73□□□□□ -0.05
BDF1YLR399C HAP5Q02516 242 aa14.73□□□□□ -0.05
BDF1YLR399C RAD26P40352 1085 aa14.73□□□□□ -0.05
BDF1YLR399C YRF1-1P0CX20 1796 aa14.72□□□□□ -0.05
BDF1YLR399C YRF1-5P0CX21 1796 aa14.72□□□□□ -0.05
BDF1YLR399C YRF1-8P0CX22 1796 aa14.72□□□□□ -0.05
BDF1YLR399C MCM2P29469 868 aa14.69□□□□□ -0.06
BDF1YLR399C RKM3P38222 552 aa14.69□□□□□ -0.06
BDF1YLR399C TPM2P40414 161 aa14.69□□□□□ -0.06
BDF1YLR399C YML133CQ03099 1374 aa14.69□□□□□ -0.06
BDF1YLR399C YLL067CQ07888 1374 aa14.69□□□□□ -0.06
BDF1YLR399C YLL066CQ99208 1374 aa14.69□□□□□ -0.06
BDF1YLR399C RTT109Q07794 436 aa14.69□□□□□ -0.06
BDF1YLR399C MAK21Q12176 1025 aaKnown RBP14.68□□□□□ -0.06
BDF1YLR399C MET5P47169 1442 aa14.68□□□□□ -0.06
BDF1YLR399C YGL081WP53156 320 aa14.67□□□□□ -0.06
BDF1YLR399C PIL1P53252 339 aaKnown RBP14.67□□□□□ -0.06
BDF1YLR399C KAR2P16474 682 aaKnown RBP14.66□□□□□ -0.06
BDF1YLR399C ESC2Q06340 456 aa14.66□□□□□ -0.06
BDF1YLR399C NUP145P49687 1317 aa14.65□□□□□ -0.06
BDF1YLR399C RAD9P14737 1309 aa14.65□□□□□ -0.06
BDF1YLR399C RRT14P40470 206 aa14.64□□□□□ -0.07
BDF1YLR399C PAP2P53632 584 aaKnown RBP14.64□□□□□ -0.07
BDF1YLR399C NUP188P52593 1655 aaKnown RBP14.63□□□□□ -0.07
BDF1YLR399C TRP5P00931 707 aaKnown RBP14.63□□□□□ -0.07
BDF1YLR399C SIR4P11978 1358 aa14.63□□□□□ -0.07
BDF1YLR399C DLD1P32891 587 aa14.62□□□□□ -0.07
BDF1YLR399C ROM2P51862 1356 aaKnown RBP14.61□□□□□ -0.07
BDF1YLR399C RPN1P38764 993 aaKnown RBP14.61□□□□□ -0.07
BDF1YLR399C ILV3P39522 585 aaKnown RBP14.61□□□□□ -0.07
BDF1YLR399C NPA3P47122 385 aa14.61□□□□□ -0.07
BDF1YLR399C CIR1P42940 261 aa14.61□□□□□ -0.07
BDF1YLR399C ALD4P46367 519 aaKnown RBP14.59□□□□□ -0.07
BDF1YLR399C SMC3P47037 1230 aa14.59□□□□□ -0.07
BDF1YLR399C NKP2Q06162 153 aa14.59□□□□□ -0.07
BDF1YLR399C MIC60P36112 540 aa14.59□□□□□ -0.07
BDF1YLR399C YRF1-4O13559 1382 aa14.59□□□□□ -0.07
BDF1YLR399C RPN12P32496 274 aa14.58□□□□□ -0.08
BDF1YLR399C RVS167P39743 482 aaKnown RBP14.58□□□□□ -0.08
BDF1YLR399C HOS3Q02959 697 aaKnown RBP14.57□□□□□ -0.08
BDF1YLR399C PSK1P31374 1356 aa14.57□□□□□ -0.08
BDF1YLR399C BDH2P39713 417 aa14.57□□□□□ -0.08
BDF1YLR399C RAD50P12753 1312 aa14.56□□□□□ -0.08
BDF1YLR399C ECM16Q04217 1267 aaKnown RBP14.56□□□□□ -0.08
BDF1YLR399C BCK1Q01389 1478 aa14.56□□□□□ -0.08
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms