RNA–Protein interactions for RNA: YLR338W

OPI9, Transcript of Dubious open reading frame, yeastyeast

Gene OPI9, Length 858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OPI9YLR338W YNR029CP53729 429 aaKnown RBP18.29■□□□□ 0.52
OPI9YLR338W RCM1P53972 490 aa18.29■□□□□ 0.52
OPI9YLR338W NST1P53935 1240 aa18.26■□□□□ 0.51
OPI9YLR338W PSK1P31374 1356 aa18.23■□□□□ 0.51
OPI9YLR338W PPH3P32345 308 aa18.22■□□□□ 0.51
OPI9YLR338W YMR196WQ04336 1088 aa18.2■□□□□ 0.5
OPI9YLR338W YML133CQ03099 1374 aa18.17■□□□□ 0.5
OPI9YLR338W YLL067CQ07888 1374 aa18.17■□□□□ 0.5
OPI9YLR338W YLL066CQ99208 1374 aa18.17■□□□□ 0.5
OPI9YLR338W CPS1P27614 576 aa18.16■□□□□ 0.5
OPI9YLR338W MIF2P35201 549 aa18.16■□□□□ 0.5
OPI9YLR338W LEU2P04173 364 aaPredicted RBP18.08■□□□□ 0.48
OPI9YLR338W THI12P42883 340 aa18.08■□□□□ 0.48
OPI9YLR338W THI5P43534 340 aa18.08■□□□□ 0.48
OPI9YLR338W THI11P47183 340 aa18.08■□□□□ 0.48
OPI9YLR338W THI13Q07748 340 aa18.08■□□□□ 0.48
OPI9YLR338W PRS1P32895 427 aaKnown RBP18.07■□□□□ 0.48
OPI9YLR338W YEF3P16521 1044 aaKnown RBP18.04■□□□□ 0.48
OPI9YLR338W MTR4P47047 1073 aaKnown RBP18.04■□□□□ 0.48
OPI9YLR338W TRK1P12685 1235 aa18.02■□□□□ 0.48
OPI9YLR338W PDI1P17967 522 aaKnown RBP18■□□□□ 0.47
OPI9YLR338W TAP42Q04372 366 aa17.97■□□□□ 0.47
OPI9YLR338W RTF1P53064 558 aa17.96■□□□□ 0.47
OPI9YLR338W KAR2P16474 682 aaKnown RBP17.95■□□□□ 0.46
OPI9YLR338W CSE4P36012 229 aa17.94■□□□□ 0.46
OPI9YLR338W IOC4Q04213 475 aa17.94■□□□□ 0.46
OPI9YLR338W ADE6P38972 1358 aaKnown RBP17.93■□□□□ 0.46
OPI9YLR338W RPS24AP0CX31 135 aaKnown RBP17.91■□□□□ 0.46
OPI9YLR338W RPS24BP0CX32 135 aaKnown RBP17.91■□□□□ 0.46
OPI9YLR338W GRX4P32642 244 aa17.9■□□□□ 0.46
OPI9YLR338W PRP43P53131 767 aaKnown RBP17.9■□□□□ 0.46
OPI9YLR338W HIM1Q06674 414 aa17.89■□□□□ 0.45
OPI9YLR338W RPP0P05317 312 aaKnown RBP17.88■□□□□ 0.45
OPI9YLR338W YDL144CQ07589 356 aa17.86■□□□□ 0.45
OPI9YLR338W AUS1Q08409 1394 aa17.86■□□□□ 0.45
OPI9YLR338W SNF2P22082 1703 aa17.86■□□□□ 0.45
OPI9YLR338W VPS27P40343 622 aaKnown RBP17.84■□□□□ 0.45
OPI9YLR338W PAP2P53632 584 aaKnown RBP17.84■□□□□ 0.45
OPI9YLR338W CDC45Q08032 650 aa17.83■□□□□ 0.44
OPI9YLR338W GAS4Q08271 471 aa17.83■□□□□ 0.44
OPI9YLR338W TY4B-HP0C2J7 1802 aa17.83■□□□□ 0.44
OPI9YLR338W TY4B-JP47024 1803 aa17.83■□□□□ 0.44
OPI9YLR338W NOP2P40991 618 aaKnown RBP17.81■□□□□ 0.44
OPI9YLR338W RTR1P40084 226 aaPredicted RBP17.8■□□□□ 0.44
OPI9YLR338W DPS1P04802 557 aaKnown RBP17.79■□□□□ 0.44
OPI9YLR338W RRP46P53256 223 aaPredicted RBP17.79■□□□□ 0.44
OPI9YLR338W MPP10P47083 593 aaKnown RBP17.78■□□□□ 0.44
OPI9YLR338W RPO41P13433 1351 aaKnown RBP17.72■□□□□ 0.43
OPI9YLR338W RVB2Q12464 471 aaKnown RBP17.71■□□□□ 0.43
OPI9YLR338W PTP3P40048 928 aa17.7■□□□□ 0.42
OPI9YLR338W SUI2P20459 304 aaKnown RBP17.68■□□□□ 0.42
OPI9YLR338W PRP5P21372 849 aaPredicted RBP17.68■□□□□ 0.42
OPI9YLR338W PRD1P25375 712 aa17.68■□□□□ 0.42
OPI9YLR338W PRP45P28004 379 aaPredicted RBP17.68■□□□□ 0.42
OPI9YLR338W YFR006WP43590 535 aa17.67■□□□□ 0.42
OPI9YLR338W BUB1P41695 1021 aaKnown RBP RIP-Chip data17.65■□□□□ 0.42not detected
OPI9YLR338W YRF1-2P40105 1681 aa17.64■□□□□ 0.42
OPI9YLR338W RRP5Q05022 1729 aaKnown RBP17.64■□□□□ 0.41
OPI9YLR338W SAP155P43612 1002 aa17.63■□□□□ 0.41
OPI9YLR338W YRB30P53107 440 aaPredicted RBP17.63■□□□□ 0.41
OPI9YLR338W THI22Q06490 572 aa17.63■□□□□ 0.41
OPI9YLR338W YIL177CP40434 1758 aa17.62■□□□□ 0.41
OPI9YLR338W YJL225CP40889 1758 aa17.62■□□□□ 0.41
OPI9YLR338W FUN12P39730 1002 aaKnown RBP17.62■□□□□ 0.41
OPI9YLR338W TPD3P31383 635 aa17.6■□□□□ 0.41
OPI9YLR338W AKL1P38080 1108 aaKnown RBP17.6■□□□□ 0.41
OPI9YLR338W SLM3Q12093 417 aa17.6■□□□□ 0.41
OPI9YLR338W MSB3P48566 633 aaPredicted RBP17.59■□□□□ 0.41
OPI9YLR338W APC1P53886 1748 aa17.57■□□□□ 0.4
OPI9YLR338W DSD1P53095 428 aa17.55■□□□□ 0.4
OPI9YLR338W FKS3Q04952 1785 aa17.55■□□□□ 0.4
OPI9YLR338W URB1P34241 1764 aaKnown RBP17.54■□□□□ 0.4
OPI9YLR338W TCB1Q12466 1186 aa17.54■□□□□ 0.4
OPI9YLR338W HEF3P53978 1044 aaKnown RBP17.53■□□□□ 0.4
OPI9YLR338W RTT109Q07794 436 aa17.53■□□□□ 0.4
OPI9YLR338W YRF1-4O13559 1382 aa17.52■□□□□ 0.39
OPI9YLR338W NAB6Q03735 1134 aaKnown RBP RIP-Chip data17.51■□□□□ 0.39not detected
OPI9YLR338W XKS1P42826 600 aa17.48■□□□□ 0.39
OPI9YLR338W REB1P21538 810 aa17.47■□□□□ 0.39
OPI9YLR338W HSP104P31539 908 aaKnown RBP17.47■□□□□ 0.39
OPI9YLR338W ENT1Q12518 454 aa17.47■□□□□ 0.39
OPI9YLR338W NTH2P35172 780 aa17.46■□□□□ 0.39
OPI9YLR338W YNL050CP53952 270 aa17.46■□□□□ 0.39
OPI9YLR338W SIR4P11978 1358 aa17.43■□□□□ 0.38
OPI9YLR338W RAD2P07276 1031 aa17.43■□□□□ 0.38
OPI9YLR338W FPR3P38911 411 aaKnown RBP17.43■□□□□ 0.38
OPI9YLR338W RSF2P46974 1380 aa17.42■□□□□ 0.38
OPI9YLR338W AOS1Q06624 347 aa17.42■□□□□ 0.38
OPI9YLR338W RCR1P38212 213 aa17.41■□□□□ 0.38
OPI9YLR338W CTF4Q01454 927 aa17.41■□□□□ 0.38
OPI9YLR338W ZDS1P50111 915 aaKnown RBP17.4■□□□□ 0.38
OPI9YLR338W GYP7P48365 746 aa17.39■□□□□ 0.37
OPI9YLR338W MAK21Q12176 1025 aaKnown RBP17.39■□□□□ 0.37
OPI9YLR338W DAL5P15365 543 aa17.38■□□□□ 0.37
OPI9YLR338W MAM1P40065 302 aa17.38■□□□□ 0.37
OPI9YLR338W RRT14P40470 206 aa17.38■□□□□ 0.37
OPI9YLR338W ENV9Q08651 330 aa17.38■□□□□ 0.37
OPI9YLR338W APP1P53933 587 aa17.37■□□□□ 0.37
OPI9YLR338W YAH1Q12184 172 aaKnown RBP17.37■□□□□ 0.37
OPI9YLR338W YIL092WP40497 633 aa17.36■□□□□ 0.37
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms