RNA–Protein interactions for RNA: YLR263W

RED1, Transcript of Protein component of the synaptonemal complex axial elements, yeast

Gene RED1, Length 2,484 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RED1	YLR263W	GAR1	P28007	205 aa	Known RBP	4.73	□□□□□ -1.65
RED1	YLR263W	BIO2	P32451	375 aa		4.73	□□□□□ -1.65
RED1	YLR263W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	RIP-Chip
RED1	YLR263W	SAS4	Q04003	481 aa		4.73	□□□□□ -1.65
RED1	YLR263W	ORC6	P38826	435 aa		4.72	□□□□□ -1.65
RED1	YLR263W	YPL062W	Q02781	134 aa		4.72	□□□□□ -1.65
RED1	YLR263W	SSA4	P22202	642 aa	Known RBP	4.72	□□□□□ -1.65
RED1	YLR263W	SOL3	P38858	249 aa		4.72	□□□□□ -1.65
RED1	YLR263W	NMA111	P53920	997 aa		4.72	□□□□□ -1.65
RED1	YLR263W	RAS1	P01119	309 aa		4.71	□□□□□ -1.65
RED1	YLR263W	NAP1	P25293	417 aa	Known RBP	4.71	□□□□□ -1.65
RED1	YLR263W	CPS1	P27614	576 aa		4.71	□□□□□ -1.65
RED1	YLR263W	IOC4	Q04213	475 aa		4.71	□□□□□ -1.65
RED1	YLR263W	TTI1	P36097	1038 aa		4.71	□□□□□ -1.66
RED1	YLR263W	YGR273C	P53329	174 aa		4.71	□□□□□ -1.66
RED1	YLR263W	DPL1	Q05567	589 aa		4.71	□□□□□ -1.66
RED1	YLR263W	TYW1	Q08960	810 aa	Known RBP	4.71	□□□□□ -1.66
RED1	YLR263W	NST1	P53935	1240 aa		4.7	□□□□□ -1.66
RED1	YLR263W	SEN54	Q02825	467 aa	Predicted RBP	4.7	□□□□□ -1.66
RED1	YLR263W	MPC54	Q08550	464 aa		4.7	□□□□□ -1.66
RED1	YLR263W	AIM44	Q99299	758 aa		4.7	□□□□□ -1.66
RED1	YLR263W	KEX1	P09620	729 aa		4.69	□□□□□ -1.66
RED1	YLR263W	SSF1	P38789	453 aa	Predicted RBP	4.68	□□□□□ -1.66
RED1	YLR263W	ISU2	Q12056	156 aa		4.68	□□□□□ -1.66
RED1	YLR263W	PAM1	P37304	830 aa	Known RBP	4.67	□□□□□ -1.66
RED1	YLR263W	YML083C	Q04526	418 aa		4.67	□□□□□ -1.66
RED1	YLR263W	RGR1	P19263	1082 aa		4.67	□□□□□ -1.66
RED1	YLR263W	BRE2	P43132	505 aa		4.67	□□□□□ -1.66
RED1	YLR263W	TEA1	P47988	759 aa		4.67	□□□□□ -1.66
RED1	YLR263W	RAD54	P32863	898 aa		4.66	□□□□□ -1.66
RED1	YLR263W	NIS1	P53939	407 aa		4.66	□□□□□ -1.66
RED1	YLR263W	GAP1	P19145	602 aa	Predicted RBP	4.66	□□□□□ -1.66
RED1	YLR263W	PUP1	P25043	261 aa		4.66	□□□□□ -1.66
RED1	YLR263W	YPR204W	Q08995	1032 aa		4.66	□□□□□ -1.66
RED1	YLR263W	SUP45	P12385	437 aa	Known RBP	4.65	□□□□□ -1.66
RED1	YLR263W	RTG2	P32608	588 aa	Known RBP	4.65	□□□□□ -1.66
RED1	YLR263W	YBL036C	P38197	257 aa		4.65	□□□□□ -1.67
RED1	YLR263W	KIC1	P38692	1080 aa		4.65	□□□□□ -1.67
RED1	YLR263W	YNL108C	P53929	270 aa		4.64	□□□□□ -1.67
RED1	YLR263W	CDC3	P32457	520 aa	Known RBP	4.64	□□□□□ -1.67
RED1	YLR263W	MVP1	P40959	511 aa	Known RBP	4.64	□□□□□ -1.67
RED1	YLR263W	HST2	P53686	357 aa		4.64	□□□□□ -1.67
RED1	YLR263W	ILV3	P39522	585 aa	Known RBP	4.63	□□□□□ -1.67
RED1	YLR263W	FPK1	P53739	893 aa		4.63	□□□□□ -1.67
RED1	YLR263W	MRX10	Q05648	414 aa		4.63	□□□□□ -1.67
RED1	YLR263W	RAD59	Q12223	238 aa		4.63	□□□□□ -1.67
RED1	YLR263W	RPL34B	P40525	121 aa	Known RBP	4.63	□□□□□ -1.67
RED1	YLR263W	RRN6	P32786	894 aa		4.62	□□□□□ -1.67
RED1	YLR263W	SCJ1	P25303	377 aa		4.62	□□□□□ -1.67
RED1	YLR263W	ENO1	P00924	437 aa	Known RBP	4.61	□□□□□ -1.67
RED1	YLR263W	YJU3	P28321	313 aa		4.61	□□□□□ -1.67
RED1	YLR263W	CSE4	P36012	229 aa		4.61	□□□□□ -1.67
RED1	YLR263W	SNU71	P53207	620 aa	Known RBP	4.61	□□□□□ -1.67
RED1	YLR263W	RPL34A	P87262	121 aa	Predicted RBP	4.61	□□□□□ -1.67
RED1	YLR263W	ENO2	P00925	437 aa	Known RBP	4.61	□□□□□ -1.67
RED1	YLR263W	ESS1	P22696	170 aa		4.61	□□□□□ -1.67
RED1	YLR263W	SLD2	P34252	453 aa		4.61	□□□□□ -1.67
RED1	YLR263W	NOP7	P53261	605 aa	Known RBP	4.61	□□□□□ -1.67
RED1	YLR263W	YDJ1	P25491	409 aa	Known RBP	4.6	□□□□□ -1.67
RED1	YLR263W	RSC30	P38781	883 aa		4.6	□□□□□ -1.67
RED1	YLR263W	RIM21	P48565	533 aa		4.6	□□□□□ -1.67
RED1	YLR263W	PEX21	P50091	288 aa		4.6	□□□□□ -1.67
RED1	YLR263W	CLB5	P30283	435 aa		4.59	□□□□□ -1.67
RED1	YLR263W	PKH3	Q03306	898 aa	Predicted RBP	4.59	□□□□□ -1.67
RED1	YLR263W	HAT1	Q12341	374 aa		4.59	□□□□□ -1.67
RED1	YLR263W	SIT4	P20604	311 aa		4.58	□□□□□ -1.68
RED1	YLR263W	HEM3	P28789	327 aa		4.58	□□□□□ -1.68
RED1	YLR263W	RDS2	P19541	446 aa	Known RBP	4.57	□□□□□ -1.68
RED1	YLR263W	PEP12	P32854	288 aa		4.57	□□□□□ -1.68
RED1	YLR263W	MMP1	Q12372	583 aa		4.57	□□□□□ -1.68
RED1	YLR263W	TGL4	P36165	910 aa		4.57	□□□□□ -1.68
RED1	YLR263W	IPL1	P38991	367 aa		4.56	□□□□□ -1.68
RED1	YLR263W	RRP15	Q06511	250 aa	Predicted RBP	4.56	□□□□□ -1.68
RED1	YLR263W	SLI15	P38283	698 aa		4.56	□□□□□ -1.68
RED1	YLR263W	MAK16	P10962	306 aa	Predicted RBP	4.55	□□□□□ -1.68
RED1	YLR263W	NPL4	P33755	580 aa		4.55	□□□□□ -1.68
RED1	YLR263W	SIS2	P36024	562 aa		4.54	□□□□□ -1.68
RED1	YLR263W	MET10	P39692	1035 aa		4.54	□□□□□ -1.68
RED1	YLR263W	ALD2	P47771	506 aa		4.54	□□□□□ -1.68
RED1	YLR263W	SPT5	P27692	1063 aa	Known RBP	4.54	□□□□□ -1.68
RED1	YLR263W	TPS3	P38426	1054 aa	Known RBP	4.54	□□□□□ -1.68
RED1	YLR263W	YMR196W	Q04336	1088 aa		4.54	□□□□□ -1.68
RED1	YLR263W	YPR109W	Q06104	294 aa		4.54	□□□□□ -1.68
RED1	YLR263W	CSC1	Q06538	782 aa		4.53	□□□□□ -1.68
RED1	YLR263W	ARG8	P18544	423 aa		4.53	□□□□□ -1.68
RED1	YLR263W	OCA5	P38738	679 aa		4.53	□□□□□ -1.68
RED1	YLR263W	PAT1	P25644	796 aa	Known RBP	4.52	□□□□□ -1.69
RED1	YLR263W	YTA7	P40340	1379 aa		4.52	□□□□□ -1.69
RED1	YLR263W	TRL1	P09880	827 aa	Known RBP	4.52	□□□□□ -1.69
RED1	YLR263W	ERP5	P38819	212 aa		4.52	□□□□□ -1.69
RED1	YLR263W	ATE1	P16639	503 aa		4.51	□□□□□ -1.69
RED1	YLR263W	CDC73	Q06697	393 aa		4.51	□□□□□ -1.69
RED1	YLR263W	YBL113C	Q7M4S9	792 aa		4.51	□□□□□ -1.69
RED1	YLR263W	SPT16	P32558	1035 aa	Known RBP	4.5	□□□□□ -1.69
RED1	YLR263W	WHI5	Q12416	295 aa		4.5	□□□□□ -1.69
RED1	YLR263W	PRT1	P06103	763 aa	Known RBP	4.5	□□□□□ -1.69
RED1	YLR263W	STM1	P39015	273 aa	Known RBP	4.5	□□□□□ -1.69
RED1	YLR263W	ECM23	Q02710	187 aa		4.49	□□□□□ -1.69
RED1	YLR263W	MSC6	Q08818	692 aa	Known RBP	4.49	□□□□□ -1.69
RED1	YLR263W	MDJ2	P42834	146 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms