RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C PEX21P50091 288 aa6.29□□□□□ -1.4
CDC42YLR229C NST1P53935 1240 aa6.29□□□□□ -1.4
CDC42YLR229C PEX29Q03370 554 aa6.29□□□□□ -1.4
CDC42YLR229C TEA1P47988 759 aa6.28□□□□□ -1.4
CDC42YLR229C LDB19Q12502 818 aa6.28□□□□□ -1.4
CDC42YLR229C CLB5P30283 435 aa6.27□□□□□ -1.41
CDC42YLR229C SLI15P38283 698 aa6.27□□□□□ -1.41
CDC42YLR229C RTG1P32607 177 aa6.26□□□□□ -1.41
CDC42YLR229C ORC6P38826 435 aa6.26□□□□□ -1.41
CDC42YLR229C CSC1Q06538 782 aa6.26□□□□□ -1.41
CDC42YLR229C CDC25P04821 1589 aa6.26□□□□□ -1.41
CDC42YLR229C TY1B-BRQ12193 1756 aa6.26□□□□□ -1.41
CDC42YLR229C TY1B-GR3Q12316 1755 aa6.26□□□□□ -1.41
CDC42YLR229C TY1B-ORQ92393 1755 aa6.26□□□□□ -1.41
CDC42YLR229C SEC61P32915 480 aa6.25□□□□□ -1.41
CDC42YLR229C ILV3P39522 585 aaKnown RBP6.25□□□□□ -1.41
CDC42YLR229C PML39Q03760 334 aa6.25□□□□□ -1.41
CDC42YLR229C IOC2Q12072 812 aa6.25□□□□□ -1.41
CDC42YLR229C PAN1P32521 1480 aa6.25□□□□□ -1.41
CDC42YLR229C TY1B-HO13535 1793 aa6.25□□□□□ -1.41
CDC42YLR229C TY1B-DR5P0C2I2 1755 aa6.25□□□□□ -1.41
CDC42YLR229C TY1B-DR6P0C2I3 1755 aa6.25□□□□□ -1.41
CDC42YLR229C TY1B-LR2P0C2I5 1755 aa6.25□□□□□ -1.41
CDC42YLR229C TY1B-LR3P0C2I6 1755 aaKnown RBP6.25□□□□□ -1.41
CDC42YLR229C TY1B-PR1P0C2I9 1755 aaKnown RBP6.25□□□□□ -1.41
CDC42YLR229C TY1B-PR2P0C2J0 1756 aa6.25□□□□□ -1.41
CDC42YLR229C TY1B-PR3P0C2J1 1755 aaKnown RBP6.25□□□□□ -1.41
CDC42YLR229C TY1B-JR1P47098 1755 aa6.25□□□□□ -1.41
CDC42YLR229C TY1B-ML2Q03434 1755 aaKnown RBP6.25□□□□□ -1.41
CDC42YLR229C TY1B-ER1Q03612 1755 aa6.25□□□□□ -1.41
CDC42YLR229C TY1B-ML1Q04711 1755 aaKnown RBP6.25□□□□□ -1.41
CDC42YLR229C TY1B-GR2Q12269 1755 aa6.25□□□□□ -1.41
CDC42YLR229C TY1B-OLQ12273 1755 aa6.25□□□□□ -1.41
CDC42YLR229C TY1B-PLQ12414 1755 aaKnown RBP6.25□□□□□ -1.41
CDC42YLR229C TSC11P40061 1430 aa6.25□□□□□ -1.41
CDC42YLR229C SSA2P10592 639 aaKnown RBP6.24□□□□□ -1.41
CDC42YLR229C TRM732Q03496 1420 aa6.24□□□□□ -1.41
CDC42YLR229C VTH1P40438 1549 aa6.23□□□□□ -1.41
CDC42YLR229C VTH2P40890 1549 aa6.23□□□□□ -1.41
CDC42YLR229C RGR1P19263 1082 aa6.22□□□□□ -1.41
CDC42YLR229C BRL1P38770 471 aa6.22□□□□□ -1.41
CDC42YLR229C YMR196WQ04336 1088 aa6.22□□□□□ -1.41
CDC42YLR229C IKI3Q06706 1349 aaKnown RBP6.22□□□□□ -1.41
CDC42YLR229C PDR15Q04182 1529 aaKnown RBP6.21□□□□□ -1.42
CDC42YLR229C GUA1P38625 525 aaKnown RBP6.21□□□□□ -1.42
CDC42YLR229C MVP1P40959 511 aaKnown RBP6.21□□□□□ -1.42
CDC42YLR229C DPL1Q05567 589 aa6.21□□□□□ -1.42
CDC42YLR229C TFB4Q12004 338 aa6.21□□□□□ -1.42
CDC42YLR229C NCR1Q12200 1170 aa6.21□□□□□ -1.42
CDC42YLR229C MLP2P40457 1679 aa6.2□□□□□ -1.42
CDC42YLR229C BUD31P25337 157 aaPredicted RBP6.2□□□□□ -1.42
CDC42YLR229C CSN12P47130 423 aa6.2□□□□□ -1.42
CDC42YLR229C CDC73Q06697 393 aa6.2□□□□□ -1.42
CDC42YLR229C GEA1P47102 1408 aaPredicted RBP6.19□□□□□ -1.42
CDC42YLR229C SNT2P53127 1403 aa6.19□□□□□ -1.42
CDC42YLR229C MID1P41821 548 aa6.19□□□□□ -1.42
CDC42YLR229C HPC2Q01448 625 aa6.18□□□□□ -1.42
CDC42YLR229C YPR109WQ06104 294 aa6.18□□□□□ -1.42
CDC42YLR229C YDL129WQ07555 291 aa6.18□□□□□ -1.42
CDC42YLR229C TUM1Q08686 304 aaKnown RBP6.18□□□□□ -1.42
CDC42YLR229C ULS1Q08562 1619 aa6.17□□□□□ -1.42
CDC42YLR229C MPC54Q08550 464 aa6.17□□□□□ -1.42
CDC42YLR229C RTT106P40161 455 aa6.16□□□□□ -1.42
CDC42YLR229C DNF1P32660 1571 aa6.15□□□□□ -1.42
CDC42YLR229C ESC1Q03661 1658 aaKnown RBP6.15□□□□□ -1.42
CDC42YLR229C GAP1P19145 602 aaPredicted RBP6.15□□□□□ -1.42
CDC42YLR229C ISU2Q12056 156 aa6.15□□□□□ -1.42
CDC42YLR229C TY1B-JR2P47100 1755 aaKnown RBP6.15□□□□□ -1.43
CDC42YLR229C TY1B-ER2Q03619 1755 aa6.15□□□□□ -1.43
CDC42YLR229C TY1B-MR1Q04214 1755 aa6.15□□□□□ -1.43
CDC42YLR229C TY1B-MR2Q04670 1755 aaKnown RBP6.15□□□□□ -1.43
CDC42YLR229C TY1B-LR1Q12088 1755 aaKnown RBP6.15□□□□□ -1.43
CDC42YLR229C TY1B-NL1Q12112 1755 aa6.15□□□□□ -1.43
CDC42YLR229C TY1B-GR1Q12141 1755 aa6.15□□□□□ -1.43
CDC42YLR229C TY1B-BLQ12490 1755 aa6.15□□□□□ -1.43
CDC42YLR229C YRR1Q12172 810 aa6.14□□□□□ -1.43
CDC42YLR229C GLN1P32288 370 aaKnown RBP6.13□□□□□ -1.43
CDC42YLR229C NPL4P33755 580 aa6.13□□□□□ -1.43
CDC42YLR229C NMA111P53920 997 aa6.13□□□□□ -1.43
CDC42YLR229C TFB3Q03290 321 aa6.13□□□□□ -1.43
CDC42YLR229C RLF2Q12495 606 aa6.13□□□□□ -1.43
CDC42YLR229C NUP170P38181 1502 aa6.13□□□□□ -1.43
CDC42YLR229C RPA190P10964 1664 aaKnown RBP6.13□□□□□ -1.43
CDC42YLR229C SAP30P38429 201 aa6.12□□□□□ -1.43
CDC42YLR229C GEA2P39993 1459 aaKnown RBP6.12□□□□□ -1.43
CDC42YLR229C NIS1P53939 407 aa6.12□□□□□ -1.43
CDC42YLR229C SSM4P40318 1319 aa6.11□□□□□ -1.43
CDC42YLR229C YJL171CP46992 396 aa6.11□□□□□ -1.43
CDC42YLR229C FPK1P53739 893 aa6.11□□□□□ -1.43
CDC42YLR229C NUP159P40477 1460 aa6.1□□□□□ -1.43
CDC42YLR229C FKH1P40466 484 aa6.1□□□□□ -1.43
CDC42YLR229C HAP5Q02516 242 aa6.1□□□□□ -1.43
CDC42YLR229C MMP1Q12372 583 aa6.1□□□□□ -1.43
CDC42YLR229C NTE1Q04958 1679 aa6.1□□□□□ -1.43
CDC42YLR229C TY3B-GQ99315 1547 aa6.09□□□□□ -1.43
CDC42YLR229C HST2P53686 357 aa6.09□□□□□ -1.43
CDC42YLR229C ELP4Q02884 456 aaKnown RBP6.09□□□□□ -1.43
CDC42YLR229C TYW1Q08960 810 aaKnown RBP6.09□□□□□ -1.43
CDC42YLR229C VPS15P22219 1454 aa6.09□□□□□ -1.44
CDC42YLR229C CAT8P39113 1433 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms