RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeastyeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSC3YLR219W PPH3P32345 308 aa9.12□□□□□ -0.95
MSC3YLR219W CPS1P27614 576 aa9.11□□□□□ -0.95
MSC3YLR219W CHZ1P40019 153 aaPredicted RBP9.1□□□□□ -0.95
MSC3YLR219W PSK1P31374 1356 aa9.08□□□□□ -0.96
MSC3YLR219W MHP1P43638 1398 aa9.08□□□□□ -0.96
MSC3YLR219W YML133CQ03099 1374 aa9.06□□□□□ -0.96
MSC3YLR219W YLL067CQ07888 1374 aa9.06□□□□□ -0.96
MSC3YLR219W YLL066CQ99208 1374 aa9.06□□□□□ -0.96
MSC3YLR219W MLP1Q02455 1875 aaKnown RBP9.05□□□□□ -0.96
MSC3YLR219W PTP3P40048 928 aa9.05□□□□□ -0.96
MSC3YLR219W TY4B-HP0C2J7 1802 aa9.03□□□□□ -0.96
MSC3YLR219W TY4B-JP47024 1803 aa9.03□□□□□ -0.96
MSC3YLR219W PDS5Q04264 1277 aa9.03□□□□□ -0.96
MSC3YLR219W SCT1P32784 759 aa9.02□□□□□ -0.97
MSC3YLR219W FKH1P40466 484 aa9.02□□□□□ -0.97
MSC3YLR219W RTG3P38165 486 aa9.01□□□□□ -0.97
MSC3YLR219W ADE6P38972 1358 aaKnown RBP9.01□□□□□ -0.97
MSC3YLR219W LEU2P04173 364 aaPredicted RBP8.99□□□□□ -0.97
MSC3YLR219W RRP5Q05022 1729 aaKnown RBP8.98□□□□□ -0.97
MSC3YLR219W MTR4P47047 1073 aaKnown RBP8.96□□□□□ -0.98
MSC3YLR219W NST1P53935 1240 aa8.96□□□□□ -0.98
MSC3YLR219W PRP43P53131 767 aaKnown RBP8.95□□□□□ -0.98
MSC3YLR219W PSD2P53037 1138 aaKnown RBP8.95□□□□□ -0.98
MSC3YLR219W RPS24AP0CX31 135 aaKnown RBP8.94□□□□□ -0.98
MSC3YLR219W RPS24BP0CX32 135 aaKnown RBP8.94□□□□□ -0.98
MSC3YLR219W CSE4P36012 229 aa8.93□□□□□ -0.98
MSC3YLR219W APP1P53933 587 aa8.93□□□□□ -0.98
MSC3YLR219W YAH1Q12184 172 aaKnown RBP8.93□□□□□ -0.98
MSC3YLR219W SPT7P35177 1332 aa8.93□□□□□ -0.98
MSC3YLR219W PRP45P28004 379 aaPredicted RBP8.93□□□□□ -0.98
MSC3YLR219W YIL177CP40434 1758 aa8.92□□□□□ -0.98
MSC3YLR219W YJL225CP40889 1758 aa8.92□□□□□ -0.98
MSC3YLR219W REB1P21538 810 aa8.92□□□□□ -0.98
MSC3YLR219W SEC3P33332 1336 aaKnown RBP8.91□□□□□ -0.98
MSC3YLR219W PRP5P21372 849 aaPredicted RBP8.9□□□□□ -0.98
MSC3YLR219W YRF1-2P40105 1681 aa8.9□□□□□ -0.98
MSC3YLR219W ENT1Q12518 454 aa8.9□□□□□ -0.98
MSC3YLR219W YEF3P16521 1044 aaKnown RBP8.89□□□□□ -0.99
MSC3YLR219W AUS1Q08409 1394 aa8.88□□□□□ -0.99
MSC3YLR219W PDI1P17967 522 aaKnown RBP8.88□□□□□ -0.99
MSC3YLR219W LEU3P08638 886 aa8.88□□□□□ -0.99
MSC3YLR219W MSB3P48566 633 aaPredicted RBP8.88□□□□□ -0.99
MSC3YLR219W TAP42Q04372 366 aa8.87□□□□□ -0.99
MSC3YLR219W HIM1Q06674 414 aa8.86□□□□□ -0.99
MSC3YLR219W ENV9Q08651 330 aa8.86□□□□□ -0.99
MSC3YLR219W TRK1P12685 1235 aa8.86□□□□□ -0.99
MSC3YLR219W GAS4Q08271 471 aa8.86□□□□□ -0.99
MSC3YLR219W RTF1P53064 558 aa8.85□□□□□ -0.99
MSC3YLR219W SLM3Q12093 417 aa8.84□□□□□ -0.99
MSC3YLR219W URB1P34241 1764 aaKnown RBP8.84□□□□□ -0.99
MSC3YLR219W DPS1P04802 557 aaKnown RBP8.83□□□□□ -1
MSC3YLR219W GRX4P32642 244 aa8.82□□□□□ -1
MSC3YLR219W FKS3Q04952 1785 aa8.82□□□□□ -1
MSC3YLR219W TCB1Q12466 1186 aa8.8□□□□□ -1
MSC3YLR219W APC1P53886 1748 aa8.8□□□□□ -1
MSC3YLR219W KAR2P16474 682 aaKnown RBP8.8□□□□□ -1
MSC3YLR219W YRF1-3P0CX14 1859 aa8.8□□□□□ -1
MSC3YLR219W YRF1-7P0CX15 1859 aa8.8□□□□□ -1
MSC3YLR219W YRF1-6P53819 1859 aa8.8□□□□□ -1
MSC3YLR219W IMH1Q06704 911 aaKnown RBP8.79□□□□□ -1
MSC3YLR219W YIL055CP40523 627 aaKnown RBP8.79□□□□□ -1
MSC3YLR219W RSF2P46974 1380 aa8.78□□□□□ -1
MSC3YLR219W XKS1P42826 600 aa8.76□□□□□ -1.01
MSC3YLR219W RRP46P53256 223 aaPredicted RBP8.76□□□□□ -1.01
MSC3YLR219W IES2P40154 320 aa8.76□□□□□ -1.01
MSC3YLR219W RPO41P13433 1351 aaKnown RBP8.76□□□□□ -1.01
MSC3YLR219W PAP2P53632 584 aaKnown RBP8.75□□□□□ -1.01
MSC3YLR219W SNF2P22082 1703 aa8.74□□□□□ -1.01
MSC3YLR219W ENP1P38333 483 aaKnown RBP8.73□□□□□ -1.01
MSC3YLR219W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
MSC3YLR219W RCR1P38212 213 aa8.72□□□□□ -1.01
MSC3YLR219W IOC4Q04213 475 aa8.72□□□□□ -1.01
MSC3YLR219W GLN1P32288 370 aaKnown RBP8.71□□□□□ -1.02
MSC3YLR219W SIR4P11978 1358 aa8.7□□□□□ -1.02
MSC3YLR219W NSR1P27476 414 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
MSC3YLR219W DMA1P38823 416 aa8.69□□□□□ -1.02
MSC3YLR219W DOT5P40553 215 aa8.69□□□□□ -1.02
MSC3YLR219W DSD1P53095 428 aa8.69□□□□□ -1.02
MSC3YLR219W YRF1-4O13559 1382 aa8.69□□□□□ -1.02
MSC3YLR219W AKL1P38080 1108 aaKnown RBP8.69□□□□□ -1.02
MSC3YLR219W YKL133CP36066 463 aa8.68□□□□□ -1.02
MSC3YLR219W RTR1P40084 226 aaPredicted RBP8.68□□□□□ -1.02
MSC3YLR219W ROM2P51862 1356 aaKnown RBP8.68□□□□□ -1.02
MSC3YLR219W FOX2Q02207 900 aaKnown RBP8.67□□□□□ -1.02
MSC3YLR219W MPP10P47083 593 aaKnown RBP8.66□□□□□ -1.02
MSC3YLR219W YMR074CQ04773 145 aa8.66□□□□□ -1.02
MSC3YLR219W ADE16P54113 591 aaKnown RBP8.66□□□□□ -1.02
MSC3YLR219W YDL144CQ07589 356 aa8.66□□□□□ -1.02
MSC3YLR219W PRD1P25375 712 aa8.65□□□□□ -1.02
MSC3YLR219W HSP104P31539 908 aaKnown RBP8.65□□□□□ -1.02
MSC3YLR219W INP54Q08227 384 aaKnown RBP8.65□□□□□ -1.03
MSC3YLR219W FRK1Q03002 865 aaPredicted RBP8.63□□□□□ -1.03
MSC3YLR219W THI22Q06490 572 aa8.63□□□□□ -1.03
MSC3YLR219W COBP00163 385 aa8.63□□□□□ -1.03
MSC3YLR219W NTH2P35172 780 aa8.63□□□□□ -1.03
MSC3YLR219W MEC3Q02574 474 aa8.63□□□□□ -1.03
MSC3YLR219W PRS1P32895 427 aaKnown RBP8.62□□□□□ -1.03
MSC3YLR219W RPN11P43588 306 aaKnown RBP8.62□□□□□ -1.03
MSC3YLR219W NUP145P49687 1317 aa8.61□□□□□ -1.03
MSC3YLR219W YKR075CP36155 307 aa8.61□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 66.8 ms