RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeastyeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIC1YLR039C CPS1P27614 576 aa3.54□□□□□ -1.84
RIC1YLR039C SLY41P22215 453 aa3.53□□□□□ -1.84
RIC1YLR039C SIS1P25294 352 aaKnown RBP3.53□□□□□ -1.84
RIC1YLR039C RTG1P32607 177 aa3.53□□□□□ -1.84
RIC1YLR039C NMA111P53920 997 aa3.53□□□□□ -1.84
RIC1YLR039C PDR1P12383 1068 aa3.53□□□□□ -1.84
RIC1YLR039C KEX2P13134 814 aa3.53□□□□□ -1.84
RIC1YLR039C RTG2P32608 588 aaKnown RBP3.53□□□□□ -1.84
RIC1YLR039C RPL34BP40525 121 aaKnown RBP3.52□□□□□ -1.85
RIC1YLR039C ENO2P00925 437 aaKnown RBP3.52□□□□□ -1.85
RIC1YLR039C SUP45P12385 437 aaKnown RBP3.52□□□□□ -1.85
RIC1YLR039C TTI1P36097 1038 aa3.52□□□□□ -1.85
RIC1YLR039C ISU2Q12056 156 aa3.52□□□□□ -1.85
RIC1YLR039C SSA1P10591 642 aaKnown RBP3.51□□□□□ -1.85
RIC1YLR039C NUD1P32336 851 aa3.51□□□□□ -1.85
RIC1YLR039C YNL115CP53925 644 aa3.51□□□□□ -1.85
RIC1YLR039C TRM1P15565 570 aaKnown RBP3.51□□□□□ -1.85
RIC1YLR039C NOB1Q08444 459 aaKnown RBP3.51□□□□□ -1.85
RIC1YLR039C ENO1P00924 437 aaKnown RBP3.5□□□□□ -1.85
RIC1YLR039C CSE4P36012 229 aa3.5□□□□□ -1.85
RIC1YLR039C STR2P47164 639 aa3.5□□□□□ -1.85
RIC1YLR039C SEC61P32915 480 aa3.5□□□□□ -1.85
RIC1YLR039C GEF1P37020 779 aa3.5□□□□□ -1.85
RIC1YLR039C ISM1P48526 1002 aa3.5□□□□□ -1.85
RIC1YLR039C YML083CQ04526 418 aa3.49□□□□□ -1.85
RIC1YLR039C MAK16P10962 306 aaPredicted RBP3.49□□□□□ -1.85
RIC1YLR039C SSA4P22202 642 aaKnown RBP3.49□□□□□ -1.85
RIC1YLR039C UBP9P39967 754 aa3.49□□□□□ -1.85
RIC1YLR039C YML020WQ03722 664 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-DR4O74302 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-HP0C2I4 478 aaKnown RBP3.49□□□□□ -1.85
RIC1YLR039C TY1A-AP0CX57 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-PR1P0CX58 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-ORP0CX59 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-PR2P0CX60 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-DR5P0CX65 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-ER2P0CX66 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-GR3P0CX67 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-LR1P0CX68 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-MR2P0CX69 440 aa3.49□□□□□ -1.85
RIC1YLR039C SEC2P17065 759 aa3.49□□□□□ -1.85
RIC1YLR039C BUD31P25337 157 aaPredicted RBP3.49□□□□□ -1.85
RIC1YLR039C TY1A-JR2P47099 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-DR1Q03856 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-ML1Q04706 440 aaKnown RBP3.49□□□□□ -1.85
RIC1YLR039C MRX10Q05648 414 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-BRQ12217 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-NL2Q12470 440 aa3.49□□□□□ -1.85
RIC1YLR039C TY1A-GR2Q12485 440 aa3.49□□□□□ -1.85
RIC1YLR039C RIM21P48565 533 aa3.48□□□□□ -1.85
RIC1YLR039C RTF1P53064 558 aa3.48□□□□□ -1.85
RIC1YLR039C AGE1Q04412 482 aa3.48□□□□□ -1.85
RIC1YLR039C NCR1Q12200 1170 aa3.48□□□□□ -1.85
RIC1YLR039C YDL129WQ07555 291 aa3.48□□□□□ -1.85
RIC1YLR039C LAM6Q08001 693 aa3.48□□□□□ -1.85
RIC1YLR039C PUP1P25043 261 aa3.47□□□□□ -1.85
RIC1YLR039C RDS2P19541 446 aaKnown RBP3.47□□□□□ -1.85
RIC1YLR039C RAM1P22007 431 aa3.47□□□□□ -1.85
RIC1YLR039C SLX8P40072 274 aa3.47□□□□□ -1.85
RIC1YLR039C ISF1P32488 338 aa3.47□□□□□ -1.85
RIC1YLR039C SAP30P38429 201 aa3.47□□□□□ -1.85
RIC1YLR039C PUS6P53294 404 aa3.47□□□□□ -1.85
RIC1YLR039C YPR015CQ12531 247 aa3.47□□□□□ -1.85
RIC1YLR039C TUB4P53378 473 aa3.46□□□□□ -1.86
RIC1YLR039C HAP5Q02516 242 aa3.46□□□□□ -1.86
RIC1YLR039C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
RIC1YLR039C BUD20Q08004 166 aaPredicted RBP3.45□□□□□ -1.86
RIC1YLR039C YDL206WQ12424 762 aa3.45□□□□□ -1.86
RIC1YLR039C ARH1P48360 493 aa3.45□□□□□ -1.86
RIC1YLR039C NOP8Q08287 484 aaPredicted RBP3.45□□□□□ -1.86
RIC1YLR039C GCD11P32481 527 aaKnown RBP3.45□□□□□ -1.86
RIC1YLR039C FKH1P40466 484 aa3.45□□□□□ -1.86
RIC1YLR039C MCM16Q12262 181 aa3.45□□□□□ -1.86
RIC1YLR039C PAC1P39946 494 aaKnown RBP3.44□□□□□ -1.86
RIC1YLR039C SPT5P27692 1063 aaKnown RBP3.44□□□□□ -1.86
RIC1YLR039C PEP12P32854 288 aa3.44□□□□□ -1.86
RIC1YLR039C NPL4P33755 580 aa3.44□□□□□ -1.86
RIC1YLR039C TGL4P36165 910 aa3.44□□□□□ -1.86
RIC1YLR039C TFG1P41895 735 aaPredicted RBP3.44□□□□□ -1.86
RIC1YLR039C KTR7P40504 517 aa3.43□□□□□ -1.86
RIC1YLR039C TBF1Q02457 562 aa3.43□□□□□ -1.86
RIC1YLR039C EMP47P43555 445 aa3.43□□□□□ -1.86
RIC1YLR039C NAF1P53919 492 aaKnown RBP3.42□□□□□ -1.86
RIC1YLR039C AIR2Q12476 344 aaKnown RBP3.42□□□□□ -1.86
RIC1YLR039C FIG4P42837 879 aa3.41□□□□□ -1.86
RIC1YLR039C BNI4P53858 892 aa3.41□□□□□ -1.86
RIC1YLR039C ECM23Q02710 187 aa3.41□□□□□ -1.86
RIC1YLR039C YPR084WQ06821 456 aa3.41□□□□□ -1.86
RIC1YLR039C RPL34AP87262 121 aaPredicted RBP3.41□□□□□ -1.86
RIC1YLR039C ITT1Q04638 464 aa3.41□□□□□ -1.86
RIC1YLR039C PDC1P06169 563 aaKnown RBP3.41□□□□□ -1.86
RIC1YLR039C RRN7P40992 514 aa3.41□□□□□ -1.86
RIC1YLR039C ELP4Q02884 456 aaKnown RBP3.41□□□□□ -1.86
RIC1YLR039C RPA14P50106 137 aa3.4□□□□□ -1.86
RIC1YLR039C YPR097WQ06839 1073 aa3.4□□□□□ -1.86
RIC1YLR039C PRT1P06103 763 aaKnown RBP3.39□□□□□ -1.87
RIC1YLR039C TPS3P38426 1054 aaKnown RBP3.39□□□□□ -1.87
RIC1YLR039C TEC1P18412 486 aa3.39□□□□□ -1.87
RIC1YLR039C CDC3P32457 520 aaKnown RBP3.39□□□□□ -1.87
RIC1YLR039C SIS2P36024 562 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms