RNA–Protein interactions for RNA: YLL061W

MMP1, Transcript of High-affinity S-methylmethionine permease, yeastyeast

Gene MMP1, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MMP1YLL061W CPS1P27614 576 aa7.34□□□□□ -1.23
MMP1YLL061W PRP45P28004 379 aaPredicted RBP7.33□□□□□ -1.24
MMP1YLL061W PPH3P32345 308 aa7.32□□□□□ -1.24
MMP1YLL061W IMH1Q06704 911 aaKnown RBP7.32□□□□□ -1.24
MMP1YLL061W KIP3P53086 805 aaKnown RBP7.31□□□□□ -1.24
MMP1YLL061W RRP5Q05022 1729 aaKnown RBP7.29□□□□□ -1.24
MMP1YLL061W SPE2P21182 396 aa7.29□□□□□ -1.24
MMP1YLL061W YMR074CQ04773 145 aa7.29□□□□□ -1.24
MMP1YLL061W ORC1P54784 914 aaPredicted RBP7.28□□□□□ -1.24
MMP1YLL061W YRF1-2P40105 1681 aa7.27□□□□□ -1.25
MMP1YLL061W PRP5P21372 849 aaPredicted RBP7.27□□□□□ -1.25
MMP1YLL061W PRI1P10363 409 aa7.26□□□□□ -1.25
MMP1YLL061W LEU3P08638 886 aa7.25□□□□□ -1.25
MMP1YLL061W TY4B-HP0C2J7 1802 aa7.25□□□□□ -1.25
MMP1YLL061W TY4B-JP47024 1803 aa7.25□□□□□ -1.25
MMP1YLL061W MSB3P48566 633 aaPredicted RBP7.24□□□□□ -1.25
MMP1YLL061W PSK1P31374 1356 aa7.24□□□□□ -1.25
MMP1YLL061W ADE6P38972 1358 aaKnown RBP7.23□□□□□ -1.25
MMP1YLL061W BUD31P25337 157 aaPredicted RBP7.23□□□□□ -1.25
MMP1YLL061W CHZ1P40019 153 aaPredicted RBP7.23□□□□□ -1.25
MMP1YLL061W CSE4P36012 229 aa7.21□□□□□ -1.25
MMP1YLL061W YLR419WQ06698 1435 aaKnown RBP7.2□□□□□ -1.26
MMP1YLL061W LEU2P04173 364 aaPredicted RBP7.2□□□□□ -1.26
MMP1YLL061W RPS24AP0CX31 135 aaKnown RBP7.2□□□□□ -1.26
MMP1YLL061W RPS24BP0CX32 135 aaKnown RBP7.2□□□□□ -1.26
MMP1YLL061W IES2P40154 320 aa7.19□□□□□ -1.26
MMP1YLL061W TCB1Q12466 1186 aa7.19□□□□□ -1.26
MMP1YLL061W MTR4P47047 1073 aaKnown RBP7.18□□□□□ -1.26
MMP1YLL061W UBP1P25037 809 aa7.17□□□□□ -1.26
MMP1YLL061W NOP2P40991 618 aaKnown RBP7.17□□□□□ -1.26
MMP1YLL061W RPN11P43588 306 aaKnown RBP7.17□□□□□ -1.26
MMP1YLL061W DOT5P40553 215 aa7.16□□□□□ -1.26
MMP1YLL061W SLM3Q12093 417 aa7.16□□□□□ -1.26
MMP1YLL061W RSF2P46974 1380 aa7.15□□□□□ -1.26
MMP1YLL061W ENP1P38333 483 aaKnown RBP7.15□□□□□ -1.27
MMP1YLL061W URB1P34241 1764 aaKnown RBP7.15□□□□□ -1.27
MMP1YLL061W PRP43P53131 767 aaKnown RBP7.14□□□□□ -1.27
MMP1YLL061W SCT1P32784 759 aa7.13□□□□□ -1.27
MMP1YLL061W FOX2Q02207 900 aaKnown RBP7.13□□□□□ -1.27
MMP1YLL061W ROM2P51862 1356 aaKnown RBP7.13□□□□□ -1.27
MMP1YLL061W YML133CQ03099 1374 aa7.13□□□□□ -1.27
MMP1YLL061W YLL067CQ07888 1374 aa7.13□□□□□ -1.27
MMP1YLL061W YLL066CQ99208 1374 aa7.13□□□□□ -1.27
MMP1YLL061W XKS1P42826 600 aa7.13□□□□□ -1.27
MMP1YLL061W YJL181WP46987 611 aa7.13□□□□□ -1.27
MMP1YLL061W YKL133CP36066 463 aa7.12□□□□□ -1.27
MMP1YLL061W DPS1P04802 557 aaKnown RBP7.11□□□□□ -1.27
MMP1YLL061W PRY3P47033 881 aa7.1□□□□□ -1.27
MMP1YLL061W GAS4Q08271 471 aa7.1□□□□□ -1.27
MMP1YLL061W FKS3Q04952 1785 aa7.1□□□□□ -1.27
MMP1YLL061W YBL086CP38177 466 aa7.1□□□□□ -1.27
MMP1YLL061W LAM6Q08001 693 aa7.1□□□□□ -1.27
MMP1YLL061W COBP00163 385 aa7.09□□□□□ -1.27
MMP1YLL061W PRP40P33203 583 aaKnown RBP7.09□□□□□ -1.27
MMP1YLL061W NPR2P39923 615 aa7.08□□□□□ -1.28
MMP1YLL061W LYS4P49367 693 aaPredicted RBP7.08□□□□□ -1.28
MMP1YLL061W YRF1-4O13559 1382 aa7.08□□□□□ -1.28
MMP1YLL061W YEF3P16521 1044 aaKnown RBP7.08□□□□□ -1.28
MMP1YLL061W RTG3P38165 486 aa7.08□□□□□ -1.28
MMP1YLL061W FKH1P40466 484 aa7.08□□□□□ -1.28
MMP1YLL061W RTF1P53064 558 aa7.08□□□□□ -1.28
MMP1YLL061W YIL177CP40434 1758 aa7.07□□□□□ -1.28
MMP1YLL061W YJL225CP40889 1758 aa7.07□□□□□ -1.28
MMP1YLL061W PDI1P17967 522 aaKnown RBP7.07□□□□□ -1.28
MMP1YLL061W NSR1P27476 414 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
MMP1YLL061W UGA2P38067 497 aa7.06□□□□□ -1.28
MMP1YLL061W EDE1P34216 1381 aa7.06□□□□□ -1.28
MMP1YLL061W APC1P53886 1748 aa7.06□□□□□ -1.28
MMP1YLL061W FRK1Q03002 865 aaPredicted RBP7.05□□□□□ -1.28
MMP1YLL061W YRF1-3P0CX14 1859 aa7.05□□□□□ -1.28
MMP1YLL061W YRF1-7P0CX15 1859 aa7.05□□□□□ -1.28
MMP1YLL061W YRF1-6P53819 1859 aa7.05□□□□□ -1.28
MMP1YLL061W ALD2P47771 506 aa7.05□□□□□ -1.28
MMP1YLL061W YKR075CP36155 307 aa7.04□□□□□ -1.28
MMP1YLL061W SSA2P10592 639 aaKnown RBP7.03□□□□□ -1.28
MMP1YLL061W MEC3Q02574 474 aa7.03□□□□□ -1.28
MMP1YLL061W RCR1P38212 213 aa7.03□□□□□ -1.28
MMP1YLL061W POL5P39985 1022 aaKnown RBP7.02□□□□□ -1.29
MMP1YLL061W GTT3P39996 337 aa7.02□□□□□ -1.29
MMP1YLL061W ADE16P54113 591 aaKnown RBP7.02□□□□□ -1.29
MMP1YLL061W HIM1Q06674 414 aa7.02□□□□□ -1.29
MMP1YLL061W MLP1Q02455 1875 aaKnown RBP7.01□□□□□ -1.29
MMP1YLL061W SIR4P11978 1358 aa7.01□□□□□ -1.29
MMP1YLL061W AUS1Q08409 1394 aa7.01□□□□□ -1.29
MMP1YLL061W GRX4P32642 244 aa7□□□□□ -1.29
MMP1YLL061W CTH1P47976 325 aa7□□□□□ -1.29
MMP1YLL061W PDS5Q04264 1277 aa7□□□□□ -1.29
MMP1YLL061W SEC3P33332 1336 aaKnown RBP7□□□□□ -1.29
MMP1YLL061W TAP42Q04372 366 aa7□□□□□ -1.29
MMP1YLL061W ATG13Q06628 738 aa7□□□□□ -1.29
MMP1YLL061W MHP1P43638 1398 aa6.99□□□□□ -1.29
MMP1YLL061W KAR2P16474 682 aaKnown RBP6.98□□□□□ -1.29
MMP1YLL061W SNF2P22082 1703 aa6.97□□□□□ -1.29
MMP1YLL061W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
MMP1YLL061W RPO41P13433 1351 aaKnown RBP6.97□□□□□ -1.29
MMP1YLL061W PAP2P53632 584 aaKnown RBP6.95□□□□□ -1.3
MMP1YLL061W MSB4Q12317 492 aa6.95□□□□□ -1.3
MMP1YLL061W SPT7P35177 1332 aa6.95□□□□□ -1.3
MMP1YLL061W BDF1P35817 686 aa6.95□□□□□ -1.3
MMP1YLL061W RPG1P38249 964 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms