RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W KIP3P53086 805 aaKnown RBP8.2□□□□□ -1.1
GEF1YJR040W SPE2P21182 396 aa8.19□□□□□ -1.1
GEF1YJR040W TAF8Q03750 510 aa8.19□□□□□ -1.1
GEF1YJR040W SIS2P36024 562 aa8.18□□□□□ -1.1
GEF1YJR040W YNR029CP53729 429 aaKnown RBP8.18□□□□□ -1.1
GEF1YJR040W YFR006WP43590 535 aa8.14□□□□□ -1.11
GEF1YJR040W PSK1P31374 1356 aa8.14□□□□□ -1.11
GEF1YJR040W THI12P42883 340 aa8.13□□□□□ -1.11
GEF1YJR040W THI5P43534 340 aa8.13□□□□□ -1.11
GEF1YJR040W THI11P47183 340 aa8.13□□□□□ -1.11
GEF1YJR040W THI13Q07748 340 aa8.13□□□□□ -1.11
GEF1YJR040W CPS1P27614 576 aa8.09□□□□□ -1.11
GEF1YJR040W FUN12P39730 1002 aaKnown RBP8.08□□□□□ -1.12
GEF1YJR040W CHZ1P40019 153 aaPredicted RBP8.08□□□□□ -1.12
GEF1YJR040W IME2P32581 645 aa8.07□□□□□ -1.12
GEF1YJR040W PDS5Q04264 1277 aa8.07□□□□□ -1.12
GEF1YJR040W CLC1P17891 233 aa8.07□□□□□ -1.12
GEF1YJR040W RCM1P53972 490 aa8.07□□□□□ -1.12
GEF1YJR040W AVT3P36062 692 aa8.06□□□□□ -1.12
GEF1YJR040W FKH1P40466 484 aa8.06□□□□□ -1.12
GEF1YJR040W NST1P53935 1240 aa8.06□□□□□ -1.12
GEF1YJR040W TCB2P48231 1178 aa8.04□□□□□ -1.12
GEF1YJR040W ADE6P38972 1358 aaKnown RBP8.04□□□□□ -1.12
GEF1YJR040W PPH3P32345 308 aa8.03□□□□□ -1.12
GEF1YJR040W MTR4P47047 1073 aaKnown RBP8.03□□□□□ -1.12
GEF1YJR040W MLP1Q02455 1875 aaKnown RBP8.02□□□□□ -1.12
GEF1YJR040W YML133CQ03099 1374 aa8.02□□□□□ -1.13
GEF1YJR040W YLL067CQ07888 1374 aa8.02□□□□□ -1.13
GEF1YJR040W YLL066CQ99208 1374 aa8.02□□□□□ -1.13
GEF1YJR040W LEU2P04173 364 aaPredicted RBP8.02□□□□□ -1.13
GEF1YJR040W YFR016CP43597 1233 aaKnown RBP8.02□□□□□ -1.13
GEF1YJR040W PRP43P53131 767 aaKnown RBP8.01□□□□□ -1.13
GEF1YJR040W PTP3P40048 928 aa8.01□□□□□ -1.13
GEF1YJR040W MNN4P36044 1178 aa7.98□□□□□ -1.13
GEF1YJR040W OPY1P38271 328 aa7.98□□□□□ -1.13
GEF1YJR040W RTG3P38165 486 aa7.97□□□□□ -1.13
GEF1YJR040W IOC4Q04213 475 aa7.97□□□□□ -1.13
GEF1YJR040W TAP42Q04372 366 aa7.97□□□□□ -1.13
GEF1YJR040W PDI1P17967 522 aaKnown RBP7.96□□□□□ -1.13
GEF1YJR040W LEO1P38439 464 aa7.96□□□□□ -1.14
GEF1YJR040W RTF1P53064 558 aa7.96□□□□□ -1.14
GEF1YJR040W GRX4P32642 244 aa7.95□□□□□ -1.14
GEF1YJR040W RPC31P17890 251 aa7.95□□□□□ -1.14
GEF1YJR040W TY4B-HP0C2J7 1802 aa7.94□□□□□ -1.14
GEF1YJR040W TY4B-JP47024 1803 aa7.94□□□□□ -1.14
GEF1YJR040W RRP5Q05022 1729 aaKnown RBP7.94□□□□□ -1.14
GEF1YJR040W YAH1Q12184 172 aaKnown RBP7.93□□□□□ -1.14
GEF1YJR040W EAF7P53911 425 aaKnown RBP7.92□□□□□ -1.14
GEF1YJR040W CSE4P36012 229 aa7.92□□□□□ -1.14
GEF1YJR040W RVB2Q12464 471 aaKnown RBP7.9□□□□□ -1.14
GEF1YJR040W YRF1-2P40105 1681 aa7.9□□□□□ -1.15
GEF1YJR040W PRP5P21372 849 aaPredicted RBP7.9□□□□□ -1.15
GEF1YJR040W CDC45Q08032 650 aa7.89□□□□□ -1.15
GEF1YJR040W RPS24AP0CX31 135 aaKnown RBP7.89□□□□□ -1.15
GEF1YJR040W RPS24BP0CX32 135 aaKnown RBP7.89□□□□□ -1.15
GEF1YJR040W VPS27P40343 622 aaKnown RBP7.89□□□□□ -1.15
GEF1YJR040W PRP45P28004 379 aaPredicted RBP7.88□□□□□ -1.15
GEF1YJR040W FPR3P38911 411 aaKnown RBP7.88□□□□□ -1.15
GEF1YJR040W AUS1Q08409 1394 aa7.88□□□□□ -1.15
GEF1YJR040W KAR2P16474 682 aaKnown RBP7.87□□□□□ -1.15
GEF1YJR040W YEF3P16521 1044 aaKnown RBP7.87□□□□□ -1.15
GEF1YJR040W RPO41P13433 1351 aaKnown RBP7.87□□□□□ -1.15
GEF1YJR040W YDL144CQ07589 356 aa7.86□□□□□ -1.15
GEF1YJR040W REB1P21538 810 aa7.85□□□□□ -1.15
GEF1YJR040W SNF7P39929 240 aaKnown RBP7.85□□□□□ -1.15
GEF1YJR040W SLM3Q12093 417 aa7.85□□□□□ -1.15
GEF1YJR040W AIM44Q99299 758 aa7.85□□□□□ -1.15
GEF1YJR040W DPS1P04802 557 aaKnown RBP7.84□□□□□ -1.15
GEF1YJR040W RPP0P05317 312 aaKnown RBP7.84□□□□□ -1.15
GEF1YJR040W RSF2P46974 1380 aa7.84□□□□□ -1.15
GEF1YJR040W SNF2P22082 1703 aa7.84□□□□□ -1.15
GEF1YJR040W ENT1Q12518 454 aa7.84□□□□□ -1.15
GEF1YJR040W TCB1Q12466 1186 aa7.83□□□□□ -1.16
GEF1YJR040W APC1P53886 1748 aa7.83□□□□□ -1.16
GEF1YJR040W TRK1P12685 1235 aa7.83□□□□□ -1.16
GEF1YJR040W FKS3Q04952 1785 aa7.82□□□□□ -1.16
GEF1YJR040W MSB3P48566 633 aaPredicted RBP7.82□□□□□ -1.16
GEF1YJR040W DMA1P38823 416 aa7.81□□□□□ -1.16
GEF1YJR040W HIM1Q06674 414 aa7.81□□□□□ -1.16
GEF1YJR040W SIR4P11978 1358 aa7.81□□□□□ -1.16
GEF1YJR040W SUI2P20459 304 aaKnown RBP7.81□□□□□ -1.16
GEF1YJR040W GAS4Q08271 471 aa7.81□□□□□ -1.16
GEF1YJR040W ENV9Q08651 330 aa7.81□□□□□ -1.16
GEF1YJR040W MPP10P47083 593 aaKnown RBP7.8□□□□□ -1.16
GEF1YJR040W URB1P34241 1764 aaKnown RBP7.8□□□□□ -1.16
GEF1YJR040W YIL177CP40434 1758 aa7.8□□□□□ -1.16
GEF1YJR040W YJL225CP40889 1758 aa7.8□□□□□ -1.16
GEF1YJR040W PAP2P53632 584 aaKnown RBP7.78□□□□□ -1.16
GEF1YJR040W APP1P53933 587 aa7.78□□□□□ -1.16
GEF1YJR040W CTF4Q01454 927 aa7.78□□□□□ -1.16
GEF1YJR040W IMH1Q06704 911 aaKnown RBP7.78□□□□□ -1.16
GEF1YJR040W EDE1P34216 1381 aa7.78□□□□□ -1.16
GEF1YJR040W ROM2P51862 1356 aaKnown RBP7.78□□□□□ -1.16
GEF1YJR040W ROX1P25042 368 aa7.77□□□□□ -1.17
GEF1YJR040W XKS1P42826 600 aa7.77□□□□□ -1.17
GEF1YJR040W IES2P40154 320 aa7.76□□□□□ -1.17
GEF1YJR040W QCR6P00127 147 aa7.75□□□□□ -1.17
GEF1YJR040W RTR1P40084 226 aaPredicted RBP7.75□□□□□ -1.17
GEF1YJR040W YRF1-4O13559 1382 aa7.75□□□□□ -1.17
GEF1YJR040W YIL055CP40523 627 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms