RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeastyeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC6YJL194W TFB3Q03290 321 aa5.88□□□□□ -1.47
CDC6YJL194W SUB1P54000 292 aaKnown RBP5.87□□□□□ -1.47
CDC6YJL194W RPL34AP87262 121 aaPredicted RBP5.87□□□□□ -1.47
CDC6YJL194W HAP5Q02516 242 aa5.87□□□□□ -1.47
CDC6YJL194W YPR109WQ06104 294 aa5.87□□□□□ -1.47
CDC6YJL194W YTA7P40340 1379 aa5.86□□□□□ -1.47
CDC6YJL194W NUG1P40010 520 aaKnown RBP5.86□□□□□ -1.47
CDC6YJL194W PAM1P37304 830 aaKnown RBP5.85□□□□□ -1.47
CDC6YJL194W TUM1Q08686 304 aaKnown RBP5.85□□□□□ -1.47
CDC6YJL194W RRN6P32786 894 aa5.84□□□□□ -1.47
CDC6YJL194W BNI4P53858 892 aa5.84□□□□□ -1.47
CDC6YJL194W YRR1Q12172 810 aa5.84□□□□□ -1.48
CDC6YJL194W HEM3P28789 327 aa5.83□□□□□ -1.48
CDC6YJL194W ASF1P32447 279 aa5.83□□□□□ -1.48
CDC6YJL194W RTS3P53289 263 aa5.83□□□□□ -1.48
CDC6YJL194W ELP4Q02884 456 aaKnown RBP5.83□□□□□ -1.48
CDC6YJL194W SPT23P35210 1082 aa5.82□□□□□ -1.48
CDC6YJL194W PRE3P38624 215 aa5.82□□□□□ -1.48
CDC6YJL194W SIT4P20604 311 aa5.81□□□□□ -1.48
CDC6YJL194W RPL34BP40525 121 aaKnown RBP5.81□□□□□ -1.48
CDC6YJL194W NIS1P53939 407 aa5.81□□□□□ -1.48
CDC6YJL194W VPS72Q03388 795 aa5.81□□□□□ -1.48
CDC6YJL194W SSA2P10592 639 aaKnown RBP5.8□□□□□ -1.48
CDC6YJL194W CHL1P22516 861 aaPredicted RBP5.8□□□□□ -1.48
CDC6YJL194W CDC3P32457 520 aaKnown RBP5.8□□□□□ -1.48
CDC6YJL194W SPC42P36094 363 aa5.8□□□□□ -1.48
CDC6YJL194W YJL007CP47080 104 aa5.8□□□□□ -1.48
CDC6YJL194W DOS2P54858 310 aa5.8□□□□□ -1.48
CDC6YJL194W YDR344CQ05510 147 aa5.8□□□□□ -1.48
CDC6YJL194W BIM1P40013 344 aa5.79□□□□□ -1.48
CDC6YJL194W CSN12P47130 423 aa5.79□□□□□ -1.48
CDC6YJL194W HST2P53686 357 aa5.79□□□□□ -1.48
CDC6YJL194W YMR196WQ04336 1088 aa5.79□□□□□ -1.48
CDC6YJL194W ITT1Q04638 464 aa5.79□□□□□ -1.48
CDC6YJL194W NUD1P32336 851 aa5.79□□□□□ -1.48
CDC6YJL194W RTF1P53064 558 aa5.79□□□□□ -1.48
CDC6YJL194W FPK1P53739 893 aa5.79□□□□□ -1.48
CDC6YJL194W FAR11P53917 953 aa5.79□□□□□ -1.48
CDC6YJL194W PDR1P12383 1068 aa5.77□□□□□ -1.49
CDC6YJL194W PKC1P24583 1151 aa5.77□□□□□ -1.49
CDC6YJL194W BCK2P33306 851 aa5.77□□□□□ -1.49
CDC6YJL194W PTC2P39966 464 aaKnown RBP5.77□□□□□ -1.49
CDC6YJL194W YML082WQ04533 649 aaKnown RBP5.77□□□□□ -1.49
CDC6YJL194W GLN1P32288 370 aaKnown RBP5.76□□□□□ -1.49
CDC6YJL194W NPL4P33755 580 aa5.76□□□□□ -1.49
CDC6YJL194W SSF1P38789 453 aaPredicted RBP5.76□□□□□ -1.49
CDC6YJL194W YJR008WP47085 338 aa5.76□□□□□ -1.49
CDC6YJL194W RAM1P22007 431 aa5.75□□□□□ -1.49
CDC6YJL194W ATG32P40458 529 aa5.75□□□□□ -1.49
CDC6YJL194W FPR4Q06205 392 aaPredicted RBP5.75□□□□□ -1.49
CDC6YJL194W KTR1P27810 393 aaKnown RBP5.74□□□□□ -1.49
CDC6YJL194W SWE1P32944 819 aa5.74□□□□□ -1.49
CDC6YJL194W YNL115CP53925 644 aa5.74□□□□□ -1.49
CDC6YJL194W MMP1Q12372 583 aa5.74□□□□□ -1.49
CDC6YJL194W CPS1P27614 576 aa5.74□□□□□ -1.49
CDC6YJL194W STR2P47164 639 aa5.74□□□□□ -1.49
CDC6YJL194W LAM6Q08001 693 aa5.74□□□□□ -1.49
CDC6YJL194W OCA5P38738 679 aa5.73□□□□□ -1.49
CDC6YJL194W ISM1P48526 1002 aa5.73□□□□□ -1.49
CDC6YJL194W SEN54Q02825 467 aaPredicted RBP5.73□□□□□ -1.49
CDC6YJL194W ATG36P46983 293 aa5.72□□□□□ -1.49
CDC6YJL194W YAF9P53930 226 aa5.72□□□□□ -1.49
CDC6YJL194W TYW1Q08960 810 aaKnown RBP5.72□□□□□ -1.49
CDC6YJL194W HAT1Q12341 374 aa5.72□□□□□ -1.49
CDC6YJL194W YPR015CQ12531 247 aa5.71□□□□□ -1.5
CDC6YJL194W KEX2P13134 814 aa5.7□□□□□ -1.5
CDC6YJL194W NMD2P38798 1089 aaKnown RBP5.7□□□□□ -1.5
CDC6YJL194W OSW7P43611 510 aa5.7□□□□□ -1.5
CDC6YJL194W NNF1P47149 201 aa5.7□□□□□ -1.5
CDC6YJL194W BUD20Q08004 166 aaPredicted RBP5.7□□□□□ -1.5
CDC6YJL194W TIF1P10081 395 aaKnown RBP5.69□□□□□ -1.5
CDC6YJL194W SLY41P22215 453 aa5.69□□□□□ -1.5
CDC6YJL194W ESS1P22696 170 aa5.69□□□□□ -1.5
CDC6YJL194W ALD4P46367 519 aaKnown RBP5.69□□□□□ -1.5
CDC6YJL194W PRT1P06103 763 aaKnown RBP5.69□□□□□ -1.5
CDC6YJL194W SCJ1P25303 377 aa5.69□□□□□ -1.5
CDC6YJL194W GCD11P32481 527 aaKnown RBP5.69□□□□□ -1.5
CDC6YJL194W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
CDC6YJL194W PKH3Q03306 898 aaPredicted RBP5.69□□□□□ -1.5
CDC6YJL194W YPR204WQ08995 1032 aa5.69□□□□□ -1.5
CDC6YJL194W GIN4Q12263 1142 aa5.69□□□□□ -1.5
CDC6YJL194W TY1A-DR4O74302 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-HP0C2I4 478 aaKnown RBP5.68□□□□□ -1.5
CDC6YJL194W TY1A-AP0CX57 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-PR1P0CX58 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-ORP0CX59 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-PR2P0CX60 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-DR5P0CX65 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-ER2P0CX66 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-GR3P0CX67 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-LR1P0CX68 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-MR2P0CX69 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-JR2P47099 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-DR1Q03856 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-ML1Q04706 440 aaKnown RBP5.68□□□□□ -1.5
CDC6YJL194W ERF2Q06551 359 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-BRQ12217 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-NL2Q12470 440 aa5.68□□□□□ -1.5
CDC6YJL194W TY1A-GR2Q12485 440 aa5.68□□□□□ -1.5
CDC6YJL194W ERG12P07277 443 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 102.7 ms