RNA–Protein interactions for RNA: YJL187C

SWE1, Transcript of Protein kinase that regulates the G2/M transition, yeast

Gene SWE1, Length 2,460 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWE1	YJL187C	YEF3	P16521	1044 aa	Known RBP	13.65	□□□□□ -0.22
SWE1	YJL187C	SUI2	P20459	304 aa	Known RBP	13.64	□□□□□ -0.23
SWE1	YJL187C	OPY1	P38271	328 aa		13.64	□□□□□ -0.23
SWE1	YJL187C	YRB30	P53107	440 aa	Predicted RBP	13.62	□□□□□ -0.23
SWE1	YJL187C	YFR016C	P43597	1233 aa	Known RBP	13.62	□□□□□ -0.23
SWE1	YJL187C	ALD4	P46367	519 aa	Known RBP	13.62	□□□□□ -0.23
SWE1	YJL187C	IPL1	P38991	367 aa		13.6	□□□□□ -0.23
SWE1	YJL187C	YPR148C	Q06523	435 aa		13.59	□□□□□ -0.23
SWE1	YJL187C	MPP10	P47083	593 aa	Known RBP	13.58	□□□□□ -0.23
SWE1	YJL187C	YML133C	Q03099	1374 aa		13.56	□□□□□ -0.24
SWE1	YJL187C	YLL067C	Q07888	1374 aa		13.56	□□□□□ -0.24
SWE1	YJL187C	YLL066C	Q99208	1374 aa		13.56	□□□□□ -0.24
SWE1	YJL187C	CAB1	Q04430	367 aa		13.53	□□□□□ -0.24
SWE1	YJL187C	CLC1	P17891	233 aa		13.53	□□□□□ -0.24
SWE1	YJL187C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	13.53	□□□□□ -0.24	not detected
SWE1	YJL187C	EAF7	P53911	425 aa	Known RBP	13.51	□□□□□ -0.25
SWE1	YJL187C	URN1	Q06525	465 aa	Known RBP	13.51	□□□□□ -0.25
SWE1	YJL187C	NAP1	P25293	417 aa	Known RBP	13.51	□□□□□ -0.25
SWE1	YJL187C	ABP1	P15891	592 aa	Known RBP	13.49	□□□□□ -0.25
SWE1	YJL187C	RRP46	P53256	223 aa	Predicted RBP	13.49	□□□□□ -0.25
SWE1	YJL187C	RTR1	P40084	226 aa	Predicted RBP	13.49	□□□□□ -0.25
SWE1	YJL187C	HAP1	P0CE41	1502 aa		13.48	□□□□□ -0.25
SWE1	YJL187C	YIR014W	P40570	242 aa		13.48	□□□□□ -0.25
SWE1	YJL187C	SAP155	P43612	1002 aa		13.47	□□□□□ -0.25
SWE1	YJL187C	DNF3	Q12674	1656 aa		13.47	□□□□□ -0.25
SWE1	YJL187C	RAD2	P07276	1031 aa		13.44	□□□□□ -0.26
SWE1	YJL187C	KRE5	P22023	1365 aa		13.43	□□□□□ -0.26
SWE1	YJL187C	KAR2	P16474	682 aa	Known RBP	13.4	□□□□□ -0.26
SWE1	YJL187C	TPD3	P31383	635 aa		13.4	□□□□□ -0.26
SWE1	YJL187C	THI22	Q06490	572 aa		13.39	□□□□□ -0.27
SWE1	YJL187C	DAL5	P15365	543 aa		13.38	□□□□□ -0.27
SWE1	YJL187C	YIL092W	P40497	633 aa		13.38	□□□□□ -0.27
SWE1	YJL187C	PRD1	P25375	712 aa		13.37	□□□□□ -0.27
SWE1	YJL187C	CAB3	P36076	571 aa		13.37	□□□□□ -0.27
SWE1	YJL187C	BNI1	P41832	1953 aa		13.37	□□□□□ -0.27
SWE1	YJL187C	PSK1	P31374	1356 aa		13.37	□□□□□ -0.27
SWE1	YJL187C	SNF7	P39929	240 aa	Known RBP	13.36	□□□□□ -0.27
SWE1	YJL187C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	13.36	□□□□□ -0.27	not detected
SWE1	YJL187C	HEF3	P53978	1044 aa	Known RBP	13.35	□□□□□ -0.27
SWE1	YJL187C	POL32	P47110	350 aa		13.34	□□□□□ -0.27
SWE1	YJL187C	RCM1	P53972	490 aa		13.34	□□□□□ -0.27
SWE1	YJL187C	TAP42	Q04372	366 aa		13.34	□□□□□ -0.27
SWE1	YJL187C	ITT1	Q04638	464 aa		13.34	□□□□□ -0.27
SWE1	YJL187C	PAP2	P53632	584 aa	Known RBP	13.33	□□□□□ -0.28
SWE1	YJL187C	HIM1	Q06674	414 aa		13.33	□□□□□ -0.28
SWE1	YJL187C	PPH3	P32345	308 aa		13.32	□□□□□ -0.28
SWE1	YJL187C	USO1	P25386	1790 aa		13.31	□□□□□ -0.28
SWE1	YJL187C	SIR4	P11978	1358 aa		13.31	□□□□□ -0.28
SWE1	YJL187C	PCT1	P13259	424 aa		13.31	□□□□□ -0.28
SWE1	YJL187C	CSE4	P36012	229 aa		13.31	□□□□□ -0.28
SWE1	YJL187C	MRX12	P47084	519 aa		13.31	□□□□□ -0.28
SWE1	YJL187C	PDI1	P17967	522 aa	Known RBP	13.3	□□□□□ -0.28
SWE1	YJL187C	AUS1	Q08409	1394 aa		13.3	□□□□□ -0.28
SWE1	YJL187C	RTT109	Q07794	436 aa		13.29	□□□□□ -0.28
SWE1	YJL187C	ROX1	P25042	368 aa		13.28	□□□□□ -0.28
SWE1	YJL187C	EBP2	P36049	427 aa	Known RBP	13.28	□□□□□ -0.28
SWE1	YJL187C	TY1B-NL2	Q99337	1749 aa	Known RBP	13.26	□□□□□ -0.29
SWE1	YJL187C	YRF1-4	O13559	1382 aa		13.25	□□□□□ -0.29
SWE1	YJL187C	DJP1	P40564	432 aa		13.24	□□□□□ -0.29
SWE1	YJL187C	RIA1	P53893	1110 aa		13.24	□□□□□ -0.29
SWE1	YJL187C	PUF6	Q04373	656 aa	Known RBP	13.24	□□□□□ -0.29
SWE1	YJL187C	MAK21	Q12176	1025 aa	Known RBP	13.24	□□□□□ -0.29
SWE1	YJL187C	LEU2	P04173	364 aa	Predicted RBP	13.23	□□□□□ -0.29
SWE1	YJL187C	GRX4	P32642	244 aa		13.23	□□□□□ -0.29
SWE1	YJL187C	RTF1	P53064	558 aa		13.23	□□□□□ -0.29
SWE1	YJL187C	VPS24	P36095	224 aa	Known RBP	13.19	□□□□□ -0.3
SWE1	YJL187C	MTR4	P47047	1073 aa	Known RBP	13.19	□□□□□ -0.3
SWE1	YJL187C	CPS1	P27614	576 aa		13.17	□□□□□ -0.3
SWE1	YJL187C	SLN1	P39928	1220 aa	Predicted RBP	13.17	□□□□□ -0.3
SWE1	YJL187C	RPO41	P13433	1351 aa	Known RBP	13.17	□□□□□ -0.3
SWE1	YJL187C	TRP5	P00931	707 aa	Known RBP	13.14	□□□□□ -0.31
SWE1	YJL187C	RLF2	Q12495	606 aa		13.14	□□□□□ -0.31
SWE1	YJL187C	MSP1	P28737	362 aa		13.13	□□□□□ -0.31
SWE1	YJL187C	APC1	P53886	1748 aa		13.13	□□□□□ -0.31
SWE1	YJL187C	GAS4	Q08271	471 aa		13.12	□□□□□ -0.31
SWE1	YJL187C	LSP1	Q12230	341 aa	Known RBP	13.12	□□□□□ -0.31
SWE1	YJL187C	RPS24A	P0CX31	135 aa	Known RBP	13.1	□□□□□ -0.31
SWE1	YJL187C	RPS24B	P0CX32	135 aa	Known RBP	13.1	□□□□□ -0.31
SWE1	YJL187C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	13.09	□□□□□ -0.31	not detected
SWE1	YJL187C	DSD1	P53095	428 aa		13.08	□□□□□ -0.31
SWE1	YJL187C	AKL1	P38080	1108 aa	Known RBP	13.08	□□□□□ -0.32
SWE1	YJL187C	ILV3	P39522	585 aa	Known RBP	13.08	□□□□□ -0.32
SWE1	YJL187C	EDE1	P34216	1381 aa		13.07	□□□□□ -0.32
SWE1	YJL187C	GYP7	P48365	746 aa		13.07	□□□□□ -0.32
SWE1	YJL187C	YNR029C	P53729	429 aa	Known RBP	13.07	□□□□□ -0.32
SWE1	YJL187C	DPS1	P04802	557 aa	Known RBP	13.06	□□□□□ -0.32
SWE1	YJL187C	ECM16	Q04217	1267 aa	Known RBP	13.06	□□□□□ -0.32
SWE1	YJL187C	ARL1	P38116	183 aa	Known RBP	13.05	□□□□□ -0.32
SWE1	YJL187C	RRT14	P40470	206 aa		13.05	□□□□□ -0.32
SWE1	YJL187C	ITC1	P53125	1264 aa		13.04	□□□□□ -0.32
SWE1	YJL187C	PRP43	P53131	767 aa	Known RBP	13.04	□□□□□ -0.32
SWE1	YJL187C	ADE6	P38972	1358 aa	Known RBP	13.04	□□□□□ -0.32
SWE1	YJL187C	YNL050C	P53952	270 aa		13.04	□□□□□ -0.32
SWE1	YJL187C	TCB2	P48231	1178 aa		13.03	□□□□□ -0.32
SWE1	YJL187C	NKP2	Q06162	153 aa		13.03	□□□□□ -0.32
SWE1	YJL187C	SRT1	Q03175	343 aa		13.02	□□□□□ -0.32
SWE1	YJL187C	RRP5	Q05022	1729 aa	Known RBP	13.02	□□□□□ -0.33
SWE1	YJL187C	TEA1	P47988	759 aa		13.02	□□□□□ -0.33
SWE1	YJL187C	RAD50	P12753	1312 aa		13.02	□□□□□ -0.33
SWE1	YJL187C	MNN4	P36044	1178 aa		13.01	□□□□□ -0.33

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms