RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W POL5P39985 1022 aaKnown RBP9.33□□□□□ -0.92
APE4YHR113W PRI1P10363 409 aa9.31□□□□□ -0.92
APE4YHR113W CPS1P27614 576 aa9.3□□□□□ -0.92
APE4YHR113W PPH3P32345 308 aa9.3□□□□□ -0.92
APE4YHR113W FAP1P53971 965 aa9.28□□□□□ -0.92
APE4YHR113W SCT1P32784 759 aa9.28□□□□□ -0.92
APE4YHR113W CHZ1P40019 153 aaPredicted RBP9.28□□□□□ -0.92
APE4YHR113W PTP3P40048 928 aa9.28□□□□□ -0.92
APE4YHR113W PSK1P31374 1356 aa9.27□□□□□ -0.93
APE4YHR113W TY4B-HP0C2J7 1802 aa9.26□□□□□ -0.93
APE4YHR113W TY4B-JP47024 1803 aa9.26□□□□□ -0.93
APE4YHR113W APP1P53933 587 aa9.24□□□□□ -0.93
APE4YHR113W RRP5Q05022 1729 aaKnown RBP9.24□□□□□ -0.93
APE4YHR113W RPL17AP05740 184 aaKnown RBP9.22□□□□□ -0.93
APE4YHR113W RPL17BP46990 184 aaKnown RBP9.22□□□□□ -0.93
APE4YHR113W YRF1-2P40105 1681 aa9.22□□□□□ -0.93
APE4YHR113W MHP1P43638 1398 aa9.22□□□□□ -0.93
APE4YHR113W REB1P21538 810 aa9.21□□□□□ -0.93
APE4YHR113W PRP45P28004 379 aaPredicted RBP9.21□□□□□ -0.94
APE4YHR113W YAH1Q12184 172 aaKnown RBP9.2□□□□□ -0.94
APE4YHR113W ADE6P38972 1358 aaKnown RBP9.19□□□□□ -0.94
APE4YHR113W MLP1Q02455 1875 aaKnown RBP9.18□□□□□ -0.94
APE4YHR113W LEU2P04173 364 aaPredicted RBP9.18□□□□□ -0.94
APE4YHR113W CSE4P36012 229 aa9.18□□□□□ -0.94
APE4YHR113W ENT1Q12518 454 aa9.18□□□□□ -0.94
APE4YHR113W MTR4P47047 1073 aaKnown RBP9.17□□□□□ -0.94
APE4YHR113W YML133CQ03099 1374 aa9.17□□□□□ -0.94
APE4YHR113W YLL067CQ07888 1374 aa9.17□□□□□ -0.94
APE4YHR113W YLL066CQ99208 1374 aa9.17□□□□□ -0.94
APE4YHR113W RPS24AP0CX31 135 aaKnown RBP9.15□□□□□ -0.94
APE4YHR113W RPS24BP0CX32 135 aaKnown RBP9.15□□□□□ -0.94
APE4YHR113W RTG3P38165 486 aa9.15□□□□□ -0.94
APE4YHR113W PDS5Q04264 1277 aa9.15□□□□□ -0.94
APE4YHR113W PRP5P21372 849 aaPredicted RBP9.15□□□□□ -0.95
APE4YHR113W ENV9Q08651 330 aa9.14□□□□□ -0.95
APE4YHR113W FKH1P40466 484 aa9.13□□□□□ -0.95
APE4YHR113W MSB3P48566 633 aaPredicted RBP9.12□□□□□ -0.95
APE4YHR113W AAD16Q02895 342 aa9.11□□□□□ -0.95
APE4YHR113W PDI1P17967 522 aaKnown RBP9.1□□□□□ -0.95
APE4YHR113W YIL055CP40523 627 aaKnown RBP9.1□□□□□ -0.95
APE4YHR113W IMH1Q06704 911 aaKnown RBP9.1□□□□□ -0.95
APE4YHR113W RTF1P53064 558 aa9.09□□□□□ -0.95
APE4YHR113W DPS1P04802 557 aaKnown RBP9.08□□□□□ -0.96
APE4YHR113W YIL177CP40434 1758 aa9.08□□□□□ -0.96
APE4YHR113W YJL225CP40889 1758 aa9.08□□□□□ -0.96
APE4YHR113W LEU3P08638 886 aa9.08□□□□□ -0.96
APE4YHR113W GAS4Q08271 471 aa9.08□□□□□ -0.96
APE4YHR113W FKS3Q04952 1785 aa9.07□□□□□ -0.96
APE4YHR113W PRP43P53131 767 aaKnown RBP9.07□□□□□ -0.96
APE4YHR113W TCB1Q12466 1186 aa9.07□□□□□ -0.96
APE4YHR113W URB1P34241 1764 aaKnown RBP9.05□□□□□ -0.96
APE4YHR113W KAR2P16474 682 aaKnown RBP9.04□□□□□ -0.96
APE4YHR113W ENP1P38333 483 aaKnown RBP9.04□□□□□ -0.96
APE4YHR113W SLM3Q12093 417 aa9.04□□□□□ -0.96
APE4YHR113W RSF2P46974 1380 aa9.03□□□□□ -0.96
APE4YHR113W PSD2P53037 1138 aaKnown RBP9.03□□□□□ -0.96
APE4YHR113W NST1P53935 1240 aa9.03□□□□□ -0.96
APE4YHR113W SEC3P33332 1336 aaKnown RBP9.02□□□□□ -0.96
APE4YHR113W APC1P53886 1748 aa9.02□□□□□ -0.97
APE4YHR113W AUS1Q08409 1394 aa9.02□□□□□ -0.97
APE4YHR113W GLN1P32288 370 aaKnown RBP9.02□□□□□ -0.97
APE4YHR113W IES2P40154 320 aa9.02□□□□□ -0.97
APE4YHR113W HIM1Q06674 414 aa9.02□□□□□ -0.97
APE4YHR113W GRX4P32642 244 aa9.01□□□□□ -0.97
APE4YHR113W XKS1P42826 600 aa9.01□□□□□ -0.97
APE4YHR113W SPT7P35177 1332 aa9□□□□□ -0.97
APE4YHR113W TAP42Q04372 366 aa9□□□□□ -0.97
APE4YHR113W PAP2P53632 584 aaKnown RBP8.99□□□□□ -0.97
APE4YHR113W TRK1P12685 1235 aa8.97□□□□□ -0.97
APE4YHR113W YEF3P16521 1044 aaKnown RBP8.97□□□□□ -0.97
APE4YHR113W YMR074CQ04773 145 aa8.97□□□□□ -0.97
APE4YHR113W ROM2P51862 1356 aaKnown RBP8.97□□□□□ -0.97
APE4YHR113W YKL133CP36066 463 aa8.95□□□□□ -0.98
APE4YHR113W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
APE4YHR113W RPO41P13433 1351 aaKnown RBP8.95□□□□□ -0.98
APE4YHR113W SNF2P22082 1703 aa8.94□□□□□ -0.98
APE4YHR113W YRF1-4O13559 1382 aa8.93□□□□□ -0.98
APE4YHR113W SIR4P11978 1358 aa8.92□□□□□ -0.98
APE4YHR113W SPT21P35209 758 aa8.92□□□□□ -0.98
APE4YHR113W DOT5P40553 215 aa8.92□□□□□ -0.98
APE4YHR113W YRF1-3P0CX14 1859 aa8.92□□□□□ -0.98
APE4YHR113W YRF1-7P0CX15 1859 aa8.92□□□□□ -0.98
APE4YHR113W YRF1-6P53819 1859 aa8.92□□□□□ -0.98
APE4YHR113W BUD31P25337 157 aaPredicted RBP8.91□□□□□ -0.98
APE4YHR113W FOX2Q02207 900 aaKnown RBP8.91□□□□□ -0.98
APE4YHR113W MEC3Q02574 474 aa8.91□□□□□ -0.98
APE4YHR113W FRK1Q03002 865 aaPredicted RBP8.91□□□□□ -0.98
APE4YHR113W UBP1P25037 809 aa8.9□□□□□ -0.98
APE4YHR113W RCR1P38212 213 aa8.9□□□□□ -0.98
APE4YHR113W RPN11P43588 306 aaKnown RBP8.9□□□□□ -0.98
APE4YHR113W YJL181WP46987 611 aa8.9□□□□□ -0.98
APE4YHR113W RIM101P33400 625 aa8.89□□□□□ -0.99
APE4YHR113W COBP00163 385 aa8.89□□□□□ -0.99
APE4YHR113W LAM6Q08001 693 aa8.89□□□□□ -0.99
APE4YHR113W PRP40P33203 583 aaKnown RBP8.88□□□□□ -0.99
APE4YHR113W HSP104P31539 908 aaKnown RBP8.87□□□□□ -0.99
APE4YHR113W ADE16P54113 591 aaKnown RBP8.87□□□□□ -0.99
APE4YHR113W AKL1P38080 1108 aaKnown RBP8.86□□□□□ -0.99
APE4YHR113W RTR1P40084 226 aaPredicted RBP8.86□□□□□ -0.99
APE4YHR113W ATG13Q06628 738 aa8.86□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms