RNA–Protein interactions for RNA: YHR041C

SRB2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB2, Length 633 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB2YHR041C YLL066CQ99208 1374 aa17.97■□□□□ 0.47
SRB2YHR041C POL5P39985 1022 aaKnown RBP17.96■□□□□ 0.47
SRB2YHR041C NAP1P25293 417 aaKnown RBP17.93■□□□□ 0.46
SRB2YHR041C PTP3P40048 928 aa17.93■□□□□ 0.46
SRB2YHR041C MLP1Q02455 1875 aaKnown RBP17.92■□□□□ 0.46
SRB2YHR041C PSK1P31374 1356 aa17.92■□□□□ 0.46
SRB2YHR041C RRP5Q05022 1729 aaKnown RBP17.9■□□□□ 0.46
SRB2YHR041C CHZ1P40019 153 aaPredicted RBP17.9■□□□□ 0.46
SRB2YHR041C YIL177CP40434 1758 aa17.87■□□□□ 0.45
SRB2YHR041C YJL225CP40889 1758 aa17.87■□□□□ 0.45
SRB2YHR041C MHP1P43638 1398 aa17.84■□□□□ 0.45
SRB2YHR041C ADE6P38972 1358 aaKnown RBP17.82■□□□□ 0.44
SRB2YHR041C RTG3P38165 486 aa17.77■□□□□ 0.44
SRB2YHR041C APP1P53933 587 aa17.77■□□□□ 0.44
SRB2YHR041C FKH1P40466 484 aa17.76■□□□□ 0.43
SRB2YHR041C NST1P53935 1240 aa17.76■□□□□ 0.43
SRB2YHR041C YRF1-2P40105 1681 aa17.74■□□□□ 0.43
SRB2YHR041C REB1P21538 810 aa17.73■□□□□ 0.43
SRB2YHR041C PDS5Q04264 1277 aa17.72■□□□□ 0.43
SRB2YHR041C RPS24AP0CX31 135 aaKnown RBP17.67■□□□□ 0.42
SRB2YHR041C RPS24BP0CX32 135 aaKnown RBP17.67■□□□□ 0.42
SRB2YHR041C YAH1Q12184 172 aaKnown RBP17.67■□□□□ 0.42
SRB2YHR041C LEU2P04173 364 aaPredicted RBP17.66■□□□□ 0.42
SRB2YHR041C PRP45P28004 379 aaPredicted RBP17.64■□□□□ 0.41
SRB2YHR041C PRP43P53131 767 aaKnown RBP17.64■□□□□ 0.41
SRB2YHR041C ENT1Q12518 454 aa17.63■□□□□ 0.41
SRB2YHR041C URB1P34241 1764 aaKnown RBP17.63■□□□□ 0.41
SRB2YHR041C CSE4P36012 229 aa17.62■□□□□ 0.41
SRB2YHR041C MTR4P47047 1073 aaKnown RBP17.62■□□□□ 0.41
SRB2YHR041C PSD2P53037 1138 aaKnown RBP17.61■□□□□ 0.41
SRB2YHR041C AUS1Q08409 1394 aa17.6■□□□□ 0.41
SRB2YHR041C PRP5P21372 849 aaPredicted RBP17.58■□□□□ 0.4
SRB2YHR041C MSB3P48566 633 aaPredicted RBP17.58■□□□□ 0.4
SRB2YHR041C YEF3P16521 1044 aaKnown RBP17.57■□□□□ 0.4
SRB2YHR041C FKS3Q04952 1785 aa17.56■□□□□ 0.4
SRB2YHR041C SPT7P35177 1332 aa17.56■□□□□ 0.4
SRB2YHR041C ENV9Q08651 330 aa17.56■□□□□ 0.4
SRB2YHR041C YRF1-3P0CX14 1859 aa17.55■□□□□ 0.4
SRB2YHR041C YRF1-7P0CX15 1859 aa17.55■□□□□ 0.4
SRB2YHR041C YRF1-6P53819 1859 aa17.55■□□□□ 0.4
SRB2YHR041C APC1P53886 1748 aa17.52■□□□□ 0.39
SRB2YHR041C HIM1Q06674 414 aa17.51■□□□□ 0.39
SRB2YHR041C LEU3P08638 886 aa17.49■□□□□ 0.39
SRB2YHR041C TRK1P12685 1235 aa17.49■□□□□ 0.39
SRB2YHR041C GAS4Q08271 471 aa17.49■□□□□ 0.39
SRB2YHR041C SCT1P32784 759 aa17.46■□□□□ 0.39
SRB2YHR041C SLM3Q12093 417 aa17.45■□□□□ 0.38
SRB2YHR041C PDI1P17967 522 aaKnown RBP17.44■□□□□ 0.38
SRB2YHR041C DPS1P04802 557 aaKnown RBP17.43■□□□□ 0.38
SRB2YHR041C YIL055CP40523 627 aaKnown RBP17.43■□□□□ 0.38
SRB2YHR041C TAP42Q04372 366 aa17.42■□□□□ 0.38
SRB2YHR041C IMH1Q06704 911 aaKnown RBP17.4■□□□□ 0.38
SRB2YHR041C RSF2P46974 1380 aa17.37■□□□□ 0.37
SRB2YHR041C TCB1Q12466 1186 aa17.36■□□□□ 0.37
SRB2YHR041C SEC3P33332 1336 aaKnown RBP17.36■□□□□ 0.37
SRB2YHR041C RTF1P53064 558 aa17.35■□□□□ 0.37
SRB2YHR041C XKS1P42826 600 aa17.33■□□□□ 0.36
SRB2YHR041C RRP46P53256 223 aaPredicted RBP17.32■□□□□ 0.36
SRB2YHR041C SNF2P22082 1703 aa17.32■□□□□ 0.36
SRB2YHR041C GLN1P32288 370 aaKnown RBP17.31■□□□□ 0.36
SRB2YHR041C IES2P40154 320 aa17.31■□□□□ 0.36
SRB2YHR041C GRX4P32642 244 aa17.3■□□□□ 0.36
SRB2YHR041C KAR2P16474 682 aaKnown RBP17.29■□□□□ 0.36
SRB2YHR041C RPO41P13433 1351 aaKnown RBP17.25■□□□□ 0.35
SRB2YHR041C DOT5P40553 215 aa17.24■□□□□ 0.35
SRB2YHR041C BUB1P41695 1021 aaKnown RBP RIP-Chip data17.24■□□□□ 0.35not detected
SRB2YHR041C RCR1P38212 213 aa17.23■□□□□ 0.35
SRB2YHR041C YRF1-4O13559 1382 aa17.21■□□□□ 0.35
SRB2YHR041C FOX2Q02207 900 aaKnown RBP17.2■□□□□ 0.34
SRB2YHR041C SIR4P11978 1358 aa17.18■□□□□ 0.34
SRB2YHR041C PAP2P53632 584 aaKnown RBP17.18■□□□□ 0.34
SRB2YHR041C YMR074CQ04773 145 aa17.17■□□□□ 0.34
SRB2YHR041C RIM15P43565 1770 aa17.15■□□□□ 0.34
SRB2YHR041C YKL133CP36066 463 aa17.15■□□□□ 0.34
SRB2YHR041C ADE16P54113 591 aaKnown RBP17.14■□□□□ 0.33
SRB2YHR041C ROM2P51862 1356 aaKnown RBP17.13■□□□□ 0.33
SRB2YHR041C DSD1P53095 428 aa17.12■□□□□ 0.33
SRB2YHR041C FRK1Q03002 865 aaPredicted RBP17.11■□□□□ 0.33
SRB2YHR041C AKL1P38080 1108 aaKnown RBP17.1■□□□□ 0.33
SRB2YHR041C ENP1P38333 483 aaKnown RBP17.09■□□□□ 0.33
SRB2YHR041C COBP00163 385 aa17.08■□□□□ 0.32
SRB2YHR041C RPN11P43588 306 aaKnown RBP17.08■□□□□ 0.32
SRB2YHR041C INP54Q08227 384 aaKnown RBP17.08■□□□□ 0.32
SRB2YHR041C YKR075CP36155 307 aa17.07■□□□□ 0.32
SRB2YHR041C MPP10P47083 593 aaKnown RBP17.06■□□□□ 0.32
SRB2YHR041C HSP104P31539 908 aaKnown RBP17.05■□□□□ 0.32
SRB2YHR041C RTR1P40084 226 aaPredicted RBP17.05■□□□□ 0.32
SRB2YHR041C BUD31P25337 157 aaPredicted RBP17.04■□□□□ 0.32
SRB2YHR041C NSR1P27476 414 aaKnown RBP RIP-Chip data17.03■□□□□ 0.32not detected
SRB2YHR041C NUP145P49687 1317 aa17.02■□□□□ 0.32
SRB2YHR041C NPR2P39923 615 aa17.02■□□□□ 0.32
SRB2YHR041C THI22Q06490 572 aa17.02■□□□□ 0.32
SRB2YHR041C PRD1P25375 712 aa17.01■□□□□ 0.31
SRB2YHR041C NTH2P35172 780 aa17■□□□□ 0.31
SRB2YHR041C IOC4Q04213 475 aa17■□□□□ 0.31
SRB2YHR041C YDL144CQ07589 356 aa17■□□□□ 0.31
SRB2YHR041C OSM1P21375 501 aaKnown RBP16.97■□□□□ 0.31
SRB2YHR041C MEC3Q02574 474 aa16.95■□□□□ 0.3
SRB2YHR041C RTT109Q07794 436 aa16.94■□□□□ 0.3
SRB2YHR041C LYS4P49367 693 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms