RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W AIR1P40507 360 aaKnown RBP6.73□□□□□ -1.33
LSB1YGR136W CSC1Q06538 782 aa6.73□□□□□ -1.33
LSB1YGR136W GAR1P28007 205 aaKnown RBP6.72□□□□□ -1.33
LSB1YGR136W KIC1P38692 1080 aa6.72□□□□□ -1.33
LSB1YGR136W CST6P40535 587 aa6.72□□□□□ -1.33
LSB1YGR136W GBP2P25555 427 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
LSB1YGR136W NUD1P32336 851 aa6.71□□□□□ -1.34
LSB1YGR136W PEP1P32319 1579 aa6.7□□□□□ -1.34
LSB1YGR136W SKI3P17883 1432 aaKnown RBP6.7□□□□□ -1.34
LSB1YGR136W CLA4P48562 842 aa6.7□□□□□ -1.34
LSB1YGR136W LAM6Q08001 693 aa6.69□□□□□ -1.34
LSB1YGR136W TUM1Q08686 304 aaKnown RBP6.69□□□□□ -1.34
LSB1YGR136W ATG2P53855 1592 aa6.69□□□□□ -1.34
LSB1YGR136W NPL4P33755 580 aa6.68□□□□□ -1.34
LSB1YGR136W SAS10Q12136 610 aaPredicted RBP6.68□□□□□ -1.34
LSB1YGR136W SPT16P32558 1035 aaKnown RBP6.66□□□□□ -1.34
LSB1YGR136W IFH1P39520 1085 aa6.66□□□□□ -1.34
LSB1YGR136W CDC4P07834 779 aa6.65□□□□□ -1.34
LSB1YGR136W GCD11P32481 527 aaKnown RBP6.65□□□□□ -1.34
LSB1YGR136W TY1A-DR4O74302 440 aa6.64□□□□□ -1.35
LSB1YGR136W LEU3P08638 886 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-HP0C2I4 478 aaKnown RBP6.64□□□□□ -1.35
LSB1YGR136W TY1A-AP0CX57 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-PR1P0CX58 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-ORP0CX59 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-PR2P0CX60 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-DR5P0CX65 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-ER2P0CX66 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-GR3P0CX67 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-LR1P0CX68 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-MR2P0CX69 440 aa6.64□□□□□ -1.35
LSB1YGR136W SEC2P17065 759 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-JR2P47099 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-DR1Q03856 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-ML1Q04706 440 aaKnown RBP6.64□□□□□ -1.35
LSB1YGR136W TY1A-BRQ12217 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-NL2Q12470 440 aa6.64□□□□□ -1.35
LSB1YGR136W TY1A-GR2Q12485 440 aa6.64□□□□□ -1.35
LSB1YGR136W SIN3P22579 1536 aa6.64□□□□□ -1.35
LSB1YGR136W MET22P32179 357 aa6.62□□□□□ -1.35
LSB1YGR136W ORC6P38826 435 aa6.61□□□□□ -1.35
LSB1YGR136W FRK1Q03002 865 aaPredicted RBP6.61□□□□□ -1.35
LSB1YGR136W BPT1P14772 1559 aa6.61□□□□□ -1.35
LSB1YGR136W SSK2P53599 1579 aa6.61□□□□□ -1.35
LSB1YGR136W REF2P42073 533 aaPredicted RBP6.6□□□□□ -1.35
LSB1YGR136W ENV9Q08651 330 aa6.6□□□□□ -1.35
LSB1YGR136W ESP1Q03018 1630 aa6.59□□□□□ -1.35
LSB1YGR136W BDP1P46678 594 aa6.58□□□□□ -1.36
LSB1YGR136W HED1Q03937 162 aa6.58□□□□□ -1.36
LSB1YGR136W PAT1P25644 796 aaKnown RBP6.57□□□□□ -1.36
LSB1YGR136W MVP1P40959 511 aaKnown RBP6.56□□□□□ -1.36
LSB1YGR136W RRN7P40992 514 aa6.56□□□□□ -1.36
LSB1YGR136W YPR148CQ06523 435 aa6.54□□□□□ -1.36
LSB1YGR136W UFD4P33202 1483 aa6.53□□□□□ -1.36
LSB1YGR136W YDR444WQ04093 687 aa6.52□□□□□ -1.37
LSB1YGR136W YPR109WQ06104 294 aa6.52□□□□□ -1.37
LSB1YGR136W MYO2P19524 1574 aaKnown RBP6.52□□□□□ -1.37
LSB1YGR136W YPK9Q12697 1472 aa6.5□□□□□ -1.37
LSB1YGR136W COX6P00427 148 aa6.5□□□□□ -1.37
LSB1YGR136W RGR1P19263 1082 aa6.5□□□□□ -1.37
LSB1YGR136W MAK21Q12176 1025 aaKnown RBP6.5□□□□□ -1.37
LSB1YGR136W SCC2Q04002 1493 aa6.48□□□□□ -1.37
LSB1YGR136W ASH1P34233 588 aa6.48□□□□□ -1.37
LSB1YGR136W YCF1P39109 1515 aaKnown RBP6.47□□□□□ -1.37
LSB1YGR136W LCB5Q06147 687 aaKnown RBP6.47□□□□□ -1.37
LSB1YGR136W YDL176WQ12027 708 aa6.46□□□□□ -1.38
LSB1YGR136W AFT1P22149 690 aa6.45□□□□□ -1.38
LSB1YGR136W MET32Q12041 191 aa6.45□□□□□ -1.38
LSB1YGR136W RPO31P04051 1460 aa6.45□□□□□ -1.38
LSB1YGR136W MOD5P07884 428 aa6.44□□□□□ -1.38
LSB1YGR136W KEX2P13134 814 aa6.44□□□□□ -1.38
LSB1YGR136W ERF2Q06551 359 aa6.44□□□□□ -1.38
LSB1YGR136W CKB1P43639 278 aa6.43□□□□□ -1.38
LSB1YGR136W HST3P53687 447 aa6.43□□□□□ -1.38
LSB1YGR136W RPN1P38764 993 aaKnown RBP6.42□□□□□ -1.38
LSB1YGR136W PAC1P39946 494 aaKnown RBP6.41□□□□□ -1.38
LSB1YGR136W TY2B-LR1P0C2J3 1770 aa6.4□□□□□ -1.38
LSB1YGR136W TY2B-FP0CX63 1770 aa6.4□□□□□ -1.38
LSB1YGR136W TY2B-GR2P0CX64 1770 aa6.4□□□□□ -1.38
LSB1YGR136W TY2B-CP25384 1770 aa6.4□□□□□ -1.38
LSB1YGR136W TY2B-DR2Q03494 1770 aa6.4□□□□□ -1.38
LSB1YGR136W TY1B-DR1Q03855 1755 aa6.4□□□□□ -1.38
LSB1YGR136W TY2B-DR3Q07791 1770 aaKnown RBP6.4□□□□□ -1.38
LSB1YGR136W TY2B-OR1Q12113 1770 aa6.4□□□□□ -1.38
LSB1YGR136W TY2B-DR1Q12472 1770 aa6.4□□□□□ -1.38
LSB1YGR136W TY2B-OR2Q12501 1770 aa6.4□□□□□ -1.38
LSB1YGR136W RRD1P40454 393 aaKnown RBP6.4□□□□□ -1.38
LSB1YGR136W VPS70P47161 811 aa6.39□□□□□ -1.39
LSB1YGR136W TOP2P06786 1428 aaKnown RBP6.39□□□□□ -1.39
LSB1YGR136W CHD1P32657 1468 aa6.39□□□□□ -1.39
LSB1YGR136W CDC25P04821 1589 aa6.37□□□□□ -1.39
LSB1YGR136W RKR1Q04781 1562 aa6.36□□□□□ -1.39
LSB1YGR136W YJR115WP47152 169 aa6.36□□□□□ -1.39
LSB1YGR136W AGE1Q04412 482 aa6.36□□□□□ -1.39
LSB1YGR136W PUS5Q06244 254 aa6.36□□□□□ -1.39
LSB1YGR136W POL1P13382 1468 aa6.35□□□□□ -1.39
LSB1YGR136W TY1B-BRQ12193 1756 aa6.35□□□□□ -1.39
LSB1YGR136W TY1B-GR3Q12316 1755 aa6.35□□□□□ -1.39
LSB1YGR136W TY1B-ORQ92393 1755 aa6.35□□□□□ -1.39
LSB1YGR136W STU1P38198 1513 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms