RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W PRT1P06103 763 aaKnown RBP6.71□□□□□ -1.34
LOC1YFR001W ATF2P53296 535 aa6.71□□□□□ -1.34
LOC1YFR001W YPR109WQ06104 294 aa6.71□□□□□ -1.34
LOC1YFR001W AIM7Q12156 149 aa6.71□□□□□ -1.34
LOC1YFR001W TY1A-DR4O74302 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-HP0C2I4 478 aaKnown RBP6.67□□□□□ -1.34
LOC1YFR001W TY1A-AP0CX57 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-PR1P0CX58 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-ORP0CX59 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-PR2P0CX60 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-DR5P0CX65 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-ER2P0CX66 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-GR3P0CX67 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-LR1P0CX68 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-MR2P0CX69 440 aa6.67□□□□□ -1.34
LOC1YFR001W KIN1P13185 1064 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-JR2P47099 440 aa6.67□□□□□ -1.34
LOC1YFR001W TEA1P47988 759 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-DR1Q03856 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-ML1Q04706 440 aaKnown RBP6.67□□□□□ -1.34
LOC1YFR001W TY1A-BRQ12217 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-NL2Q12470 440 aa6.67□□□□□ -1.34
LOC1YFR001W TY1A-GR2Q12485 440 aa6.67□□□□□ -1.34
LOC1YFR001W CLB5P30283 435 aa6.66□□□□□ -1.34
LOC1YFR001W NPL4P33755 580 aa6.66□□□□□ -1.34
LOC1YFR001W SEC2P17065 759 aa6.65□□□□□ -1.34
LOC1YFR001W MRF1P30775 413 aaPredicted RBP6.65□□□□□ -1.34
LOC1YFR001W YEL077CQ3E7X8 1277 aa6.64□□□□□ -1.35
LOC1YFR001W GAR1P28007 205 aaKnown RBP6.63□□□□□ -1.35
LOC1YFR001W GCD11P32481 527 aaKnown RBP6.63□□□□□ -1.35
LOC1YFR001W GBP2P25555 427 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35 RIP-Chip
LOC1YFR001W NIS1P53939 407 aa6.59□□□□□ -1.35
LOC1YFR001W ERG12P07277 443 aa6.58□□□□□ -1.36
LOC1YFR001W ERF2Q06551 359 aa6.58□□□□□ -1.36
LOC1YFR001W KEX2P13134 814 aa6.57□□□□□ -1.36
LOC1YFR001W SIT4P20604 311 aa6.57□□□□□ -1.36
LOC1YFR001W FPK1P53739 893 aa6.57□□□□□ -1.36
LOC1YFR001W SPT16P32558 1035 aaKnown RBP6.56□□□□□ -1.36
LOC1YFR001W CST6P40535 587 aa6.56□□□□□ -1.36
LOC1YFR001W RRN7P40992 514 aa6.55□□□□□ -1.36
LOC1YFR001W GUA1P38625 525 aaKnown RBP6.54□□□□□ -1.36
LOC1YFR001W CSN12P47130 423 aa6.54□□□□□ -1.36
LOC1YFR001W YMR196WQ04336 1088 aa6.54□□□□□ -1.36
LOC1YFR001W HST2P53686 357 aa6.53□□□□□ -1.36
LOC1YFR001W LAM6Q08001 693 aa6.53□□□□□ -1.36
LOC1YFR001W BRE2P43132 505 aa6.52□□□□□ -1.37
LOC1YFR001W TYW1Q08960 810 aaKnown RBP6.52□□□□□ -1.37
LOC1YFR001W SCJ1P25303 377 aa6.51□□□□□ -1.37
LOC1YFR001W PAT1P25644 796 aaKnown RBP6.51□□□□□ -1.37
LOC1YFR001W KTR1P27810 393 aaKnown RBP6.51□□□□□ -1.37
LOC1YFR001W RTF1P53064 558 aa6.51□□□□□ -1.37
LOC1YFR001W YNL115CP53925 644 aa6.51□□□□□ -1.37
LOC1YFR001W GLN1P32288 370 aaKnown RBP6.5□□□□□ -1.37
LOC1YFR001W CLA4P48562 842 aa6.5□□□□□ -1.37
LOC1YFR001W AGE1Q04412 482 aa6.5□□□□□ -1.37
LOC1YFR001W MMP1Q12372 583 aa6.5□□□□□ -1.37
LOC1YFR001W PAC1P39946 494 aaKnown RBP6.49□□□□□ -1.37
LOC1YFR001W BDP1P46678 594 aa6.48□□□□□ -1.37
LOC1YFR001W HPC2Q01448 625 aa6.48□□□□□ -1.37
LOC1YFR001W FRK1Q03002 865 aaPredicted RBP6.48□□□□□ -1.37
LOC1YFR001W SSA2P10592 639 aaKnown RBP6.47□□□□□ -1.37
LOC1YFR001W SLY41P22215 453 aa6.47□□□□□ -1.37
LOC1YFR001W ESS1P22696 170 aa6.47□□□□□ -1.37
LOC1YFR001W AIR1P40507 360 aaKnown RBP6.47□□□□□ -1.37
LOC1YFR001W TUB4P53378 473 aa6.47□□□□□ -1.37
LOC1YFR001W MOD5P07884 428 aa6.46□□□□□ -1.38
LOC1YFR001W DMA2P53924 522 aa6.45□□□□□ -1.38
LOC1YFR001W YJU3P28321 313 aa6.44□□□□□ -1.38
LOC1YFR001W PKH3Q03306 898 aaPredicted RBP6.43□□□□□ -1.38
LOC1YFR001W GCR2Q01722 534 aa6.42□□□□□ -1.38
LOC1YFR001W TFB3Q03290 321 aa6.42□□□□□ -1.38
LOC1YFR001W CDC4P07834 779 aa6.41□□□□□ -1.38
LOC1YFR001W PUS6P53294 404 aa6.41□□□□□ -1.38
LOC1YFR001W HED1Q03937 162 aa6.41□□□□□ -1.38
LOC1YFR001W RSC30P38781 883 aa6.4□□□□□ -1.38
LOC1YFR001W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
LOC1YFR001W TRM1P15565 570 aaKnown RBP6.39□□□□□ -1.39
LOC1YFR001W BRL1P38770 471 aa6.39□□□□□ -1.39
LOC1YFR001W RAD59Q12223 238 aa6.39□□□□□ -1.39
LOC1YFR001W ARG8P18544 423 aa6.38□□□□□ -1.39
LOC1YFR001W HGH1P48362 394 aaKnown RBP6.38□□□□□ -1.39
LOC1YFR001W PKC1P24583 1151 aa6.37□□□□□ -1.39
LOC1YFR001W TPD3P31383 635 aa6.37□□□□□ -1.39
LOC1YFR001W KXD1P53158 218 aa6.36□□□□□ -1.39
LOC1YFR001W TBF1Q02457 562 aa6.36□□□□□ -1.39
LOC1YFR001W PUS5Q06244 254 aa6.36□□□□□ -1.39
LOC1YFR001W PDC1P06169 563 aaKnown RBP6.34□□□□□ -1.39
LOC1YFR001W MET32Q12041 191 aa6.34□□□□□ -1.39
LOC1YFR001W YDL206WQ12424 762 aa6.34□□□□□ -1.39
LOC1YFR001W RRD1P40454 393 aaKnown RBP6.33□□□□□ -1.4
LOC1YFR001W HXT10P43581 546 aa6.33□□□□□ -1.4
LOC1YFR001W RPA14P50106 137 aa6.33□□□□□ -1.4
LOC1YFR001W MET22P32179 357 aa6.32□□□□□ -1.4
LOC1YFR001W CSE4P36012 229 aa6.31□□□□□ -1.4
LOC1YFR001W YBL036CP38197 257 aa6.31□□□□□ -1.4
LOC1YFR001W YPR097WQ06839 1073 aa6.31□□□□□ -1.4
LOC1YFR001W ALR1Q08269 859 aa6.3□□□□□ -1.4
LOC1YFR001W AFT1P22149 690 aa6.29□□□□□ -1.4
LOC1YFR001W ASH1P34233 588 aa6.29□□□□□ -1.4
LOC1YFR001W MTC5Q03897 1148 aa6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms