RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W GAR1P28007 205 aaKnown RBP7.72□□□□□ -1.17
DEG1YFL001W RAD54P32863 898 aa7.71□□□□□ -1.18
DEG1YFL001W BUD20Q08004 166 aaPredicted RBP7.71□□□□□ -1.18
DEG1YFL001W AIR1P40507 360 aaKnown RBP7.7□□□□□ -1.18
DEG1YFL001W BRE2P43132 505 aa7.7□□□□□ -1.18
DEG1YFL001W CSN12P47130 423 aa7.7□□□□□ -1.18
DEG1YFL001W PRT1P06103 763 aaKnown RBP7.69□□□□□ -1.18
DEG1YFL001W PKC1P24583 1151 aa7.69□□□□□ -1.18
DEG1YFL001W CLA4P48562 842 aa7.67□□□□□ -1.18
DEG1YFL001W GCR2Q01722 534 aa7.67□□□□□ -1.18
DEG1YFL001W ERG12P07277 443 aa7.66□□□□□ -1.18
DEG1YFL001W GBP2P25555 427 aaKnown RBP RIP-Chip data7.65□□□□□ -1.18not detected
DEG1YFL001W ORC6P38826 435 aa7.65□□□□□ -1.18
DEG1YFL001W SSA1P10591 642 aaKnown RBP7.63□□□□□ -1.19
DEG1YFL001W GLN1P32288 370 aaKnown RBP7.63□□□□□ -1.19
DEG1YFL001W BIM1P40013 344 aa7.63□□□□□ -1.19
DEG1YFL001W CST6P40535 587 aa7.63□□□□□ -1.19
DEG1YFL001W TEA1P47988 759 aa7.63□□□□□ -1.19
DEG1YFL001W YRR1Q12172 810 aa7.63□□□□□ -1.19
DEG1YFL001W STR2P47164 639 aa7.62□□□□□ -1.19
DEG1YFL001W SUB2Q07478 446 aaKnown RBP7.62□□□□□ -1.19
DEG1YFL001W YJL007CP47080 104 aa7.61□□□□□ -1.19
DEG1YFL001W PEX21P50091 288 aa7.61□□□□□ -1.19
DEG1YFL001W KTR1P27810 393 aaKnown RBP7.6□□□□□ -1.19
DEG1YFL001W ISM1P48526 1002 aa7.6□□□□□ -1.19
DEG1YFL001W GEF1P37020 779 aa7.59□□□□□ -1.19
DEG1YFL001W ATG32P40458 529 aa7.59□□□□□ -1.19
DEG1YFL001W YML020WQ03722 664 aa7.59□□□□□ -1.19
DEG1YFL001W GAP1P19145 602 aaPredicted RBP7.57□□□□□ -1.2
DEG1YFL001W RGR1P19263 1082 aa7.57□□□□□ -1.2
DEG1YFL001W CLB5P30283 435 aa7.57□□□□□ -1.2
DEG1YFL001W NOP8Q08287 484 aaPredicted RBP7.57□□□□□ -1.2
DEG1YFL001W TFB4Q12004 338 aa7.57□□□□□ -1.2
DEG1YFL001W NUD1P32336 851 aa7.55□□□□□ -1.2
DEG1YFL001W CSC1Q06538 782 aa7.55□□□□□ -1.2
DEG1YFL001W TYW1Q08960 810 aaKnown RBP7.55□□□□□ -1.2
DEG1YFL001W MVP1P40959 511 aaKnown RBP7.54□□□□□ -1.2
DEG1YFL001W LAM6Q08001 693 aa7.54□□□□□ -1.2
DEG1YFL001W SSA4P22202 642 aaKnown RBP7.53□□□□□ -1.2
DEG1YFL001W MET22P32179 357 aa7.53□□□□□ -1.2
DEG1YFL001W SLX8P40072 274 aa7.53□□□□□ -1.2
DEG1YFL001W RPL34BP40525 121 aaKnown RBP7.53□□□□□ -1.2
DEG1YFL001W TIF1P10081 395 aaKnown RBP7.52□□□□□ -1.2
DEG1YFL001W NPL4P33755 580 aa7.52□□□□□ -1.2
DEG1YFL001W YBL036CP38197 257 aa7.52□□□□□ -1.2
DEG1YFL001W CDC4P07834 779 aa7.52□□□□□ -1.21
DEG1YFL001W HST2P53686 357 aa7.52□□□□□ -1.21
DEG1YFL001W TUM1Q08686 304 aaKnown RBP7.52□□□□□ -1.21
DEG1YFL001W SPT16P32558 1035 aaKnown RBP7.51□□□□□ -1.21
DEG1YFL001W NIS1P53939 407 aa7.51□□□□□ -1.21
DEG1YFL001W BIO2P32451 375 aa7.5□□□□□ -1.21
DEG1YFL001W FPK1P53739 893 aa7.5□□□□□ -1.21
DEG1YFL001W TY1A-DR4O74302 440 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-HP0C2I4 478 aaKnown RBP7.48□□□□□ -1.21
DEG1YFL001W TY1A-AP0CX57 440 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-PR1P0CX58 440 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-ORP0CX59 440 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-PR2P0CX60 440 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-DR5P0CX65 440 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-ER2P0CX66 440 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-GR3P0CX67 440 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-LR1P0CX68 440 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-MR2P0CX69 440 aa7.48□□□□□ -1.21
DEG1YFL001W GCD11P32481 527 aaKnown RBP7.48□□□□□ -1.21
DEG1YFL001W CSE4P36012 229 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-JR2P47099 440 aa7.48□□□□□ -1.21
DEG1YFL001W FRK1Q03002 865 aaPredicted RBP7.48□□□□□ -1.21
DEG1YFL001W TY1A-DR1Q03856 440 aa7.48□□□□□ -1.21
DEG1YFL001W YMR196WQ04336 1088 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-ML1Q04706 440 aaKnown RBP7.48□□□□□ -1.21
DEG1YFL001W TY1A-BRQ12217 440 aa7.48□□□□□ -1.21
DEG1YFL001W RAD59Q12223 238 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-NL2Q12470 440 aa7.48□□□□□ -1.21
DEG1YFL001W TY1A-GR2Q12485 440 aa7.48□□□□□ -1.21
DEG1YFL001W TTI1P36097 1038 aa7.47□□□□□ -1.21
DEG1YFL001W YPR109WQ06104 294 aa7.47□□□□□ -1.21
DEG1YFL001W ENV9Q08651 330 aa7.47□□□□□ -1.21
DEG1YFL001W MMP1Q12372 583 aa7.47□□□□□ -1.21
DEG1YFL001W SEC2P17065 759 aa7.46□□□□□ -1.22
DEG1YFL001W PKH3Q03306 898 aaPredicted RBP7.46□□□□□ -1.22
DEG1YFL001W YPR204WQ08995 1032 aa7.46□□□□□ -1.22
DEG1YFL001W CPS1P27614 576 aa7.45□□□□□ -1.22
DEG1YFL001W RTG2P32608 588 aaKnown RBP7.45□□□□□ -1.22
DEG1YFL001W SIT4P20604 311 aa7.44□□□□□ -1.22
DEG1YFL001W ESS1P22696 170 aa7.44□□□□□ -1.22
DEG1YFL001W SCJ1P25303 377 aa7.43□□□□□ -1.22
DEG1YFL001W SUP45P12385 437 aaKnown RBP7.42□□□□□ -1.22
DEG1YFL001W BDP1P46678 594 aa7.42□□□□□ -1.22
DEG1YFL001W YNL108CP53929 270 aa7.42□□□□□ -1.22
DEG1YFL001W HED1Q03937 162 aa7.42□□□□□ -1.22
DEG1YFL001W PAT1P25644 796 aaKnown RBP7.4□□□□□ -1.22
DEG1YFL001W YJU3P28321 313 aa7.4□□□□□ -1.22
DEG1YFL001W NOB1Q08444 459 aaKnown RBP7.4□□□□□ -1.22
DEG1YFL001W RRN7P40992 514 aa7.39□□□□□ -1.23
DEG1YFL001W YDR444WQ04093 687 aa7.39□□□□□ -1.23
DEG1YFL001W SPT5P27692 1063 aaKnown RBP7.38□□□□□ -1.23
DEG1YFL001W ARG8P18544 423 aa7.37□□□□□ -1.23
DEG1YFL001W RPL34AP87262 121 aaPredicted RBP7.37□□□□□ -1.23
DEG1YFL001W YDL176WQ12027 708 aa7.37□□□□□ -1.23
DEG1YFL001W CDC3P32457 520 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms