RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C TY1A-DR1Q03856 440 aa7.05□□□□□ -1.28
SMB1YER029C YDR444WQ04093 687 aa7.05□□□□□ -1.28
SMB1YER029C TY1A-ML1Q04706 440 aaKnown RBP7.05□□□□□ -1.28
SMB1YER029C TY1A-BRQ12217 440 aa7.05□□□□□ -1.28
SMB1YER029C TY1A-NL2Q12470 440 aa7.05□□□□□ -1.28
SMB1YER029C TY1A-GR2Q12485 440 aa7.05□□□□□ -1.28
SMB1YER029C NPL4P33755 580 aa7.04□□□□□ -1.28
SMB1YER029C BDP1P46678 594 aa7.04□□□□□ -1.28
SMB1YER029C RRN7P40992 514 aa7□□□□□ -1.29
SMB1YER029C YDR090CQ03193 310 aa7□□□□□ -1.29
SMB1YER029C KIC1P38692 1080 aa6.99□□□□□ -1.29
SMB1YER029C YDL176WQ12027 708 aa6.99□□□□□ -1.29
SMB1YER029C GAP1P19145 602 aaPredicted RBP6.97□□□□□ -1.29
SMB1YER029C TFB4Q12004 338 aa6.97□□□□□ -1.29
SMB1YER029C CSC1Q06538 782 aa6.95□□□□□ -1.3
SMB1YER029C HED1Q03937 162 aa6.94□□□□□ -1.3
SMB1YER029C LCB5Q06147 687 aaKnown RBP6.93□□□□□ -1.3
SMB1YER029C ASH1P34233 588 aa6.92□□□□□ -1.3
SMB1YER029C MET32Q12041 191 aa6.9□□□□□ -1.3
SMB1YER029C PAT1P25644 796 aaKnown RBP6.87□□□□□ -1.31
SMB1YER029C IFH1P39520 1085 aa6.87□□□□□ -1.31
SMB1YER029C HST3P53687 447 aa6.85□□□□□ -1.31
SMB1YER029C ORC6P38826 435 aa6.84□□□□□ -1.31
SMB1YER029C RRD1P40454 393 aaKnown RBP6.84□□□□□ -1.31
SMB1YER029C PUS5Q06244 254 aa6.83□□□□□ -1.32
SMB1YER029C ERF2Q06551 359 aa6.83□□□□□ -1.32
SMB1YER029C AFT1P22149 690 aa6.82□□□□□ -1.32
SMB1YER029C MTC5Q03897 1148 aa6.82□□□□□ -1.32
SMB1YER029C KEX2P13134 814 aa6.81□□□□□ -1.32
SMB1YER029C MVP1P40959 511 aaKnown RBP6.8□□□□□ -1.32
SMB1YER029C REF2P42073 533 aaPredicted RBP6.8□□□□□ -1.32
SMB1YER029C YPR109WQ06104 294 aa6.8□□□□□ -1.32
SMB1YER029C YJR115WP47152 169 aa6.79□□□□□ -1.32
SMB1YER029C CAF120P53836 1060 aa6.79□□□□□ -1.32
SMB1YER029C PAC1P39946 494 aaKnown RBP6.78□□□□□ -1.32
SMB1YER029C MOD5P07884 428 aa6.73□□□□□ -1.33
SMB1YER029C YPR148CQ06523 435 aa6.72□□□□□ -1.33
SMB1YER029C RGR1P19263 1082 aa6.71□□□□□ -1.34
SMB1YER029C MAK21Q12176 1025 aaKnown RBP6.7□□□□□ -1.34
SMB1YER029C COX6P00427 148 aa6.68□□□□□ -1.34
SMB1YER029C TRK2P28584 889 aa6.66□□□□□ -1.34
SMB1YER029C TUB4P53378 473 aa6.66□□□□□ -1.34
SMB1YER029C ACO2P39533 789 aa6.65□□□□□ -1.34
SMB1YER029C AGE1Q04412 482 aa6.64□□□□□ -1.35
SMB1YER029C OPT2Q06593 877 aa6.64□□□□□ -1.35
SMB1YER029C VPS70P47161 811 aa6.62□□□□□ -1.35
SMB1YER029C YGR035CP53222 116 aa6.62□□□□□ -1.35
SMB1YER029C MSB3P48566 633 aaPredicted RBP6.58□□□□□ -1.36
SMB1YER029C HPF1Q05164 967 aa6.58□□□□□ -1.36
SMB1YER029C UGA3P26370 528 aa6.57□□□□□ -1.36
SMB1YER029C YIR007WP40566 764 aa6.57□□□□□ -1.36
SMB1YER029C PTK2P47116 818 aaKnown RBP6.57□□□□□ -1.36
SMB1YER029C SRF1Q12516 437 aa6.56□□□□□ -1.36
SMB1YER029C YLR346CQ06139 101 aa6.54□□□□□ -1.36
SMB1YER029C SYH1Q02875 849 aaKnown RBP6.51□□□□□ -1.37
SMB1YER029C CLB5P30283 435 aa6.5□□□□□ -1.37
SMB1YER029C PSE1P32337 1089 aaKnown RBP6.5□□□□□ -1.37
SMB1YER029C RTF1P53064 558 aa6.49□□□□□ -1.37
SMB1YER029C KXD1P53158 218 aa6.49□□□□□ -1.37
SMB1YER029C TYW1Q08960 810 aaKnown RBP6.49□□□□□ -1.37
SMB1YER029C LSB3P43603 459 aaKnown RBP6.48□□□□□ -1.37
SMB1YER029C SCW11P53189 542 aa6.48□□□□□ -1.37
SMB1YER029C HXT10P43581 546 aa6.47□□□□□ -1.37
SMB1YER029C GLY1P37303 387 aaKnown RBP6.46□□□□□ -1.38
SMB1YER029C YNL115CP53925 644 aa6.46□□□□□ -1.38
SMB1YER029C TY1A-BLQ12266 440 aa6.46□□□□□ -1.38
SMB1YER029C MIP1P15801 1254 aa6.44□□□□□ -1.38
SMB1YER029C ICP55P40051 511 aa6.44□□□□□ -1.38
SMB1YER029C PDC1P06169 563 aaKnown RBP6.43□□□□□ -1.38
SMB1YER029C TPD3P31383 635 aa6.43□□□□□ -1.38
SMB1YER029C NUP85P46673 744 aa6.43□□□□□ -1.38
SMB1YER029C PBS2P08018 668 aa6.42□□□□□ -1.38
SMB1YER029C KIP2P28743 706 aa6.42□□□□□ -1.38
SMB1YER029C PUS1Q12211 544 aaKnown RBP6.42□□□□□ -1.38
SMB1YER029C SIT4P20604 311 aa6.39□□□□□ -1.39
SMB1YER029C MDJ1P35191 511 aa6.39□□□□□ -1.39
SMB1YER029C CKB1P43639 278 aa6.39□□□□□ -1.39
SMB1YER029C YPR204WQ08995 1032 aa6.38□□□□□ -1.39
SMB1YER029C IXR1P33417 597 aa6.37□□□□□ -1.39
SMB1YER029C MAM3Q12296 706 aa6.36□□□□□ -1.39
SMB1YER029C NRD1P53617 575 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
SMB1YER029C TEA1P47988 759 aa6.34□□□□□ -1.39
SMB1YER029C NIS1P53939 407 aa6.33□□□□□ -1.4
SMB1YER029C DLD1P32891 587 aa6.32□□□□□ -1.4
SMB1YER029C MRT4P33201 236 aaKnown RBP6.32□□□□□ -1.4
SMB1YER029C SLY41P22215 453 aa6.31□□□□□ -1.4
SMB1YER029C LSC2P53312 427 aa6.31□□□□□ -1.4
SMB1YER029C IES2P40154 320 aa6.3□□□□□ -1.4
SMB1YER029C ROG3P43602 733 aa6.3□□□□□ -1.4
SMB1YER029C UBP2Q01476 1272 aa6.3□□□□□ -1.4
SMB1YER029C ALR1Q08269 859 aa6.3□□□□□ -1.4
SMB1YER029C YDL206WQ12424 762 aa6.3□□□□□ -1.4
SMB1YER029C RTT106P40161 455 aa6.28□□□□□ -1.4
SMB1YER029C AAD14P42884 376 aa6.28□□□□□ -1.4
SMB1YER029C RPA14P50106 137 aa6.28□□□□□ -1.4
SMB1YER029C TCB1Q12466 1186 aa6.28□□□□□ -1.4
SMB1YER029C TBF1Q02457 562 aa6.27□□□□□ -1.41
SMB1YER029C PHM7Q12252 991 aa6.27□□□□□ -1.41
SMB1YER029C ARG82P07250 355 aa6.26□□□□□ -1.41
SMB1YER029C YJR098CP47139 656 aa6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms