RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W GYP5Q12344 894 aa9.46□□□□□ -0.9
SPT3YDR392W USO1P25386 1790 aa9.45□□□□□ -0.9
SPT3YDR392W TOP2P06786 1428 aaKnown RBP9.43□□□□□ -0.9
SPT3YDR392W SPP41P38904 1435 aa9.43□□□□□ -0.9
SPT3YDR392W TFG1P41895 735 aaPredicted RBP9.43□□□□□ -0.9
SPT3YDR392W JIP4Q03361 876 aa9.43□□□□□ -0.9
SPT3YDR392W HTA1P04911 132 aaKnown RBP9.4□□□□□ -0.9
SPT3YDR392W HTA2P04912 132 aa9.4□□□□□ -0.9
SPT3YDR392W DCW1P36091 449 aa9.36□□□□□ -0.91
SPT3YDR392W DAN4P47179 1161 aa9.36□□□□□ -0.91
SPT3YDR392W PTC4P38089 393 aa9.34□□□□□ -0.91
SPT3YDR392W MAK11P20484 414 aaKnown RBP9.33□□□□□ -0.92
SPT3YDR392W GDB1Q06625 1536 aa9.32□□□□□ -0.92
SPT3YDR392W SNT2P53127 1403 aa9.31□□□□□ -0.92
SPT3YDR392W RAM2P29703 316 aa9.3□□□□□ -0.92
SPT3YDR392W YEL023CP39992 682 aa9.3□□□□□ -0.92
SPT3YDR392W GRE2Q12068 342 aaKnown RBP9.3□□□□□ -0.92
SPT3YDR392W YDL129WQ07555 291 aa9.29□□□□□ -0.92
SPT3YDR392W SSA1P10591 642 aaKnown RBP9.28□□□□□ -0.92
SPT3YDR392W VTH1P40438 1549 aa9.27□□□□□ -0.93
SPT3YDR392W VTH2P40890 1549 aa9.27□□□□□ -0.93
SPT3YDR392W SAP30P38429 201 aa9.27□□□□□ -0.93
SPT3YDR392W CHC1P22137 1653 aaKnown RBP9.26□□□□□ -0.93
SPT3YDR392W BNR1P40450 1375 aa9.26□□□□□ -0.93
SPT3YDR392W TSC11P40061 1430 aa9.23□□□□□ -0.93
SPT3YDR392W ATH1P48016 1211 aa9.23□□□□□ -0.93
SPT3YDR392W MAK10Q02197 733 aa9.23□□□□□ -0.93
SPT3YDR392W IQG1Q12280 1495 aa9.22□□□□□ -0.93
SPT3YDR392W GUT1P32190 709 aa9.22□□□□□ -0.93
SPT3YDR392W PTC3P34221 468 aaKnown RBP9.22□□□□□ -0.93
SPT3YDR392W MLP2P40457 1679 aa9.2□□□□□ -0.94
SPT3YDR392W CHL1P22516 861 aaPredicted RBP9.19□□□□□ -0.94
SPT3YDR392W EDS1P38073 919 aa9.19□□□□□ -0.94
SPT3YDR392W COQ8P27697 501 aa9.18□□□□□ -0.94
SPT3YDR392W MET10P39692 1035 aa9.17□□□□□ -0.94
SPT3YDR392W MYO4P32492 1471 aa9.16□□□□□ -0.94
SPT3YDR392W PRE3P38624 215 aa9.16□□□□□ -0.94
SPT3YDR392W TY3B-GQ99315 1547 aa9.15□□□□□ -0.94
SPT3YDR392W BUD3P25558 1636 aa9.15□□□□□ -0.94
SPT3YDR392W YMR074CQ04773 145 aa9.14□□□□□ -0.95
SPT3YDR392W NOP53Q12080 455 aaKnown RBP9.13□□□□□ -0.95
SPT3YDR392W PDR12Q02785 1511 aa9.13□□□□□ -0.95
SPT3YDR392W PML39Q03760 334 aa9.12□□□□□ -0.95
SPT3YDR392W THI12P42883 340 aa9.11□□□□□ -0.95
SPT3YDR392W THI5P43534 340 aa9.11□□□□□ -0.95
SPT3YDR392W THI11P47183 340 aa9.11□□□□□ -0.95
SPT3YDR392W THI13Q07748 340 aa9.11□□□□□ -0.95
SPT3YDR392W BCK2P33306 851 aa9.1□□□□□ -0.95
SPT3YDR392W YAP3P38749 330 aa9.1□□□□□ -0.95
SPT3YDR392W YSP2Q06681 1438 aa9.08□□□□□ -0.96
SPT3YDR392W YMR196WQ04336 1088 aa9.08□□□□□ -0.96
SPT3YDR392W TY1B-NL2Q99337 1749 aaKnown RBP9.08□□□□□ -0.96
SPT3YDR392W NST1P53935 1240 aa9.06□□□□□ -0.96
SPT3YDR392W SMC4Q12267 1418 aa9.05□□□□□ -0.96
SPT3YDR392W STU1P38198 1513 aa9.04□□□□□ -0.96
SPT3YDR392W AI4P03878 556 aa9.03□□□□□ -0.96
SPT3YDR392W MPH3P0CE00 602 aa9.03□□□□□ -0.96
SPT3YDR392W SOL3P38858 249 aa9.03□□□□□ -0.96
SPT3YDR392W ELP4Q02884 456 aaKnown RBP9.03□□□□□ -0.96
SPT3YDR392W YTA7P40340 1379 aa9.01□□□□□ -0.97
SPT3YDR392W SNQ2P32568 1501 aaKnown RBP9.01□□□□□ -0.97
SPT3YDR392W APP1P53933 587 aa9.01□□□□□ -0.97
SPT3YDR392W HAP1P0CE41 1502 aa9□□□□□ -0.97
SPT3YDR392W ARH1P48360 493 aa8.99□□□□□ -0.97
SPT3YDR392W SSN2P38931 1420 aa8.98□□□□□ -0.97
SPT3YDR392W MID1P41821 548 aa8.98□□□□□ -0.97
SPT3YDR392W YBT1P32386 1661 aa8.96□□□□□ -0.98
SPT3YDR392W VRP1P37370 817 aa8.95□□□□□ -0.98
SPT3YDR392W YGR273CP53329 174 aa8.95□□□□□ -0.98
SPT3YDR392W PEX29Q03370 554 aa8.95□□□□□ -0.98
SPT3YDR392W YDR344CQ05510 147 aa8.94□□□□□ -0.98
SPT3YDR392W XDJ1P39102 459 aa8.93□□□□□ -0.98
SPT3YDR392W YOR1P53049 1477 aa8.93□□□□□ -0.98
SPT3YDR392W SPT23P35210 1082 aa8.9□□□□□ -0.98
SPT3YDR392W NUP157P40064 1391 aaKnown RBP8.89□□□□□ -0.99
SPT3YDR392W ILV3P39522 585 aaKnown RBP8.88□□□□□ -0.99
SPT3YDR392W HAP5Q02516 242 aa8.87□□□□□ -0.99
SPT3YDR392W BCK1Q01389 1478 aa8.86□□□□□ -0.99
SPT3YDR392W POL1P13382 1468 aa8.85□□□□□ -0.99
SPT3YDR392W SET1P38827 1080 aaKnown RBP8.85□□□□□ -0.99
SPT3YDR392W NUP188P52593 1655 aaKnown RBP8.85□□□□□ -0.99
SPT3YDR392W BNI4P53858 892 aa8.82□□□□□ -1
SPT3YDR392W MPC54Q08550 464 aa8.82□□□□□ -1
SPT3YDR392W SLI15P38283 698 aa8.81□□□□□ -1
SPT3YDR392W ENV9Q08651 330 aa8.81□□□□□ -1
SPT3YDR392W VMR1P38735 1592 aa8.81□□□□□ -1
SPT3YDR392W NMA111P53920 997 aa8.79□□□□□ -1
SPT3YDR392W PTC2P39966 464 aaKnown RBP8.78□□□□□ -1
SPT3YDR392W YML082WQ04533 649 aaKnown RBP8.78□□□□□ -1
SPT3YDR392W DPL1Q05567 589 aa8.78□□□□□ -1
SPT3YDR392W KEX1P09620 729 aa8.77□□□□□ -1.01
SPT3YDR392W RTT106P40161 455 aa8.77□□□□□ -1.01
SPT3YDR392W SEC7P11075 2009 aaKnown RBP8.74□□□□□ -1.01
SPT3YDR392W YRF1-2P40105 1681 aa8.74□□□□□ -1.01
SPT3YDR392W IML1P47170 1584 aa8.73□□□□□ -1.01
SPT3YDR392W YBL086CP38177 466 aa8.71□□□□□ -1.02
SPT3YDR392W ISU2Q12056 156 aa8.71□□□□□ -1.02
SPT3YDR392W DPS1P04802 557 aaKnown RBP8.7□□□□□ -1.02
SPT3YDR392W UBP14P38237 781 aaKnown RBP8.7□□□□□ -1.02
SPT3YDR392W IFH1P39520 1085 aa8.7□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms