RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C SNQ2P32568 1501 aaKnown RBP3.1□□□□□ -1.91
SSD1YDR293C TYW1Q08960 810 aaKnown RBP3.1□□□□□ -1.91
SSD1YDR293C TFC8Q12308 588 aa3.1□□□□□ -1.91
SSD1YDR293C HGH1P48362 394 aaKnown RBP3.09□□□□□ -1.91
SSD1YDR293C PSD2P53037 1138 aaKnown RBP3.09□□□□□ -1.91
SSD1YDR293C KTR7P40504 517 aa3.09□□□□□ -1.91
SSD1YDR293C SCY1P53009 804 aa3.09□□□□□ -1.91
SSD1YDR293C IML1P47170 1584 aa3.08□□□□□ -1.92
SSD1YDR293C EDE1P34216 1381 aa3.08□□□□□ -1.92
SSD1YDR293C VHR2P40041 505 aa3.08□□□□□ -1.92
SSD1YDR293C IOC4Q04213 475 aa3.08□□□□□ -1.92
SSD1YDR293C TSC11P40061 1430 aa3.08□□□□□ -1.92
SSD1YDR293C BIM1P40013 344 aa3.07□□□□□ -1.92
SSD1YDR293C IQG1Q12280 1495 aa3.07□□□□□ -1.92
SSD1YDR293C TRM732Q03496 1420 aa3.07□□□□□ -1.92
SSD1YDR293C ATG32P40458 529 aa3.07□□□□□ -1.92
SSD1YDR293C GEA1P47102 1408 aaPredicted RBP3.07□□□□□ -1.92
SSD1YDR293C COQ8P27697 501 aa3.07□□□□□ -1.92
SSD1YDR293C EPS1P40557 701 aa3.06□□□□□ -1.92
SSD1YDR293C RTT106P40161 455 aa3.06□□□□□ -1.92
SSD1YDR293C RPL34AP87262 121 aaPredicted RBP3.06□□□□□ -1.92
SSD1YDR293C SRB8P25648 1427 aa3.06□□□□□ -1.92
SSD1YDR293C BRL1P38770 471 aa3.05□□□□□ -1.92
SSD1YDR293C MET10P39692 1035 aa3.05□□□□□ -1.92
SSD1YDR293C VTH1P40438 1549 aa3.04□□□□□ -1.92
SSD1YDR293C VTH2P40890 1549 aa3.04□□□□□ -1.92
SSD1YDR293C VMR1P38735 1592 aa3.04□□□□□ -1.92
SSD1YDR293C PAF1P38351 445 aa3.04□□□□□ -1.92
SSD1YDR293C SSA1P10591 642 aaKnown RBP3.04□□□□□ -1.92
SSD1YDR293C RTG3P38165 486 aa3.04□□□□□ -1.92
SSD1YDR293C POL5P39985 1022 aaKnown RBP3.04□□□□□ -1.92
SSD1YDR293C YNL108CP53929 270 aa3.04□□□□□ -1.92
SSD1YDR293C URN1Q06525 465 aaKnown RBP3.03□□□□□ -1.92
SSD1YDR293C AIM44Q99299 758 aa3.03□□□□□ -1.92
SSD1YDR293C PDR5P33302 1511 aaKnown RBP3.03□□□□□ -1.92
SSD1YDR293C IFH1P39520 1085 aa3.03□□□□□ -1.92
SSD1YDR293C NOP7P53261 605 aaKnown RBP3.03□□□□□ -1.92
SSD1YDR293C YML083CQ04526 418 aa3.03□□□□□ -1.92
SSD1YDR293C SUB2Q07478 446 aaKnown RBP3.03□□□□□ -1.92
SSD1YDR293C HAT1Q12341 374 aa3.03□□□□□ -1.92
SSD1YDR293C YBL036CP38197 257 aa3.02□□□□□ -1.93
SSD1YDR293C ENP1P38333 483 aaKnown RBP3.02□□□□□ -1.93
SSD1YDR293C REF2P42073 533 aaPredicted RBP3.02□□□□□ -1.93
SSD1YDR293C THI12P42883 340 aa3.02□□□□□ -1.93
SSD1YDR293C THI5P43534 340 aa3.02□□□□□ -1.93
SSD1YDR293C THI11P47183 340 aa3.02□□□□□ -1.93
SSD1YDR293C YNR021WP53723 404 aaKnown RBP3.02□□□□□ -1.93
SSD1YDR293C THI13Q07748 340 aa3.02□□□□□ -1.93
SSD1YDR293C BDF1P35817 686 aa3.02□□□□□ -1.93
SSD1YDR293C CSN12P47130 423 aa3.02□□□□□ -1.93
SSD1YDR293C SCJ1P25303 377 aa3.01□□□□□ -1.93
SSD1YDR293C DSF2P38213 736 aa3.01□□□□□ -1.93
SSD1YDR293C DBP1P24784 617 aaKnown RBP3.01□□□□□ -1.93
SSD1YDR293C GEF1P37020 779 aa3.01□□□□□ -1.93
SSD1YDR293C EDS1P38073 919 aa3.01□□□□□ -1.93
SSD1YDR293C ARO1P08566 1588 aaKnown RBP3□□□□□ -1.93
SSD1YDR293C RTG2P32608 588 aaKnown RBP3□□□□□ -1.93
SSD1YDR293C KIC1P38692 1080 aa3□□□□□ -1.93
SSD1YDR293C NUP188P52593 1655 aaKnown RBP2.99□□□□□ -1.93
SSD1YDR293C NAP1P25293 417 aaKnown RBP2.99□□□□□ -1.93
SSD1YDR293C YFR016CP43597 1233 aaKnown RBP2.99□□□□□ -1.93
SSD1YDR293C YMR196WQ04336 1088 aa2.99□□□□□ -1.93
SSD1YDR293C GCN2P15442 1659 aa2.98□□□□□ -1.93
SSD1YDR293C NUP159P40477 1460 aa2.98□□□□□ -1.93
SSD1YDR293C NUP42P49686 430 aaKnown RBP2.98□□□□□ -1.93
SSD1YDR293C BUD21Q08492 214 aaPredicted RBP2.98□□□□□ -1.93
SSD1YDR293C CFT1Q06632 1357 aaKnown RBP2.98□□□□□ -1.93
SSD1YDR293C SSA4P22202 642 aaKnown RBP2.97□□□□□ -1.93
SSD1YDR293C PKH3Q03306 898 aaPredicted RBP2.97□□□□□ -1.93
SSD1YDR293C TIF1P10081 395 aaKnown RBP2.97□□□□□ -1.93
SSD1YDR293C MAK11P20484 414 aaKnown RBP2.97□□□□□ -1.93
SSD1YDR293C ESS1P22696 170 aa2.97□□□□□ -1.93
SSD1YDR293C STS1P38637 319 aa2.97□□□□□ -1.93
SSD1YDR293C SNF2P22082 1703 aa2.97□□□□□ -1.93
SSD1YDR293C JIP5Q06214 492 aaPredicted RBP2.97□□□□□ -1.93
SSD1YDR293C MHP1P43638 1398 aa2.96□□□□□ -1.94
SSD1YDR293C ARG8P18544 423 aa2.96□□□□□ -1.94
SSD1YDR293C GLN1P32288 370 aaKnown RBP2.96□□□□□ -1.94
SSD1YDR293C RRN6P32786 894 aa2.96□□□□□ -1.94
SSD1YDR293C YRB30P53107 440 aaPredicted RBP2.96□□□□□ -1.94
SSD1YDR293C SSM4P40318 1319 aa2.95□□□□□ -1.94
SSD1YDR293C RPP0P05317 312 aaKnown RBP2.95□□□□□ -1.94
SSD1YDR293C VPS29P38759 282 aa2.95□□□□□ -1.94
SSD1YDR293C SLD2P34252 453 aa2.95□□□□□ -1.94
SSD1YDR293C UBP14P38237 781 aaKnown RBP2.95□□□□□ -1.94
SSD1YDR293C YJU3P28321 313 aa2.94□□□□□ -1.94
SSD1YDR293C ESL2P36168 1195 aa2.94□□□□□ -1.94
SSD1YDR293C MAP2P38174 421 aaKnown RBP2.94□□□□□ -1.94
SSD1YDR293C ITT1Q04638 464 aa2.94□□□□□ -1.94
SSD1YDR293C NUP157P40064 1391 aaKnown RBP2.94□□□□□ -1.94
SSD1YDR293C YDJ1P25491 409 aaKnown RBP2.94□□□□□ -1.94
SSD1YDR293C KTR1P27810 393 aaKnown RBP2.93□□□□□ -1.94
SSD1YDR293C BIO2P32451 375 aa2.93□□□□□ -1.94
SSD1YDR293C YPR148CQ06523 435 aa2.93□□□□□ -1.94
SSD1YDR293C RAV1P47104 1357 aa2.93□□□□□ -1.94
SSD1YDR293C ATH1P48016 1211 aa2.93□□□□□ -1.94
SSD1YDR293C ECM23Q02710 187 aa2.93□□□□□ -1.94
SSD1YDR293C RTC1Q08281 1341 aa2.93□□□□□ -1.94
SSD1YDR293C CDC3P32457 520 aaKnown RBP2.92□□□□□ -1.94
SSD1YDR293C PTC3P34221 468 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms