RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE3, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE3YDR288W SIT4P20604 311 aa8.44□□□□□ -1.06
NSE3YDR288W ESS1P22696 170 aa8.44□□□□□ -1.06
NSE3YDR288W PDR1P12383 1068 aa8.43□□□□□ -1.06
NSE3YDR288W SLY41P22215 453 aa8.43□□□□□ -1.06
NSE3YDR288W PKC1P24583 1151 aa8.43□□□□□ -1.06
NSE3YDR288W YNL115CP53925 644 aa8.41□□□□□ -1.06
NSE3YDR288W ARG8P18544 423 aa8.4□□□□□ -1.06
NSE3YDR288W RTF1P53064 558 aa8.4□□□□□ -1.06
NSE3YDR288W BNI4P53858 892 aa8.4□□□□□ -1.06
NSE3YDR288W KEX2P13134 814 aa8.39□□□□□ -1.07
NSE3YDR288W SPT23P35210 1082 aa8.39□□□□□ -1.07
NSE3YDR288W YBL036CP38197 257 aa8.39□□□□□ -1.07
NSE3YDR288W YJL007CP47080 104 aa8.39□□□□□ -1.07
NSE3YDR288W YDR344CQ05510 147 aa8.39□□□□□ -1.07
NSE3YDR288W PTC2P39966 464 aaKnown RBP8.38□□□□□ -1.07
NSE3YDR288W RAD59Q12223 238 aa8.38□□□□□ -1.07
NSE3YDR288W YJU3P28321 313 aa8.37□□□□□ -1.07
NSE3YDR288W GCD11P32481 527 aaKnown RBP8.36□□□□□ -1.07
NSE3YDR288W PRE3P38624 215 aa8.35□□□□□ -1.07
NSE3YDR288W ISM1P48526 1002 aa8.35□□□□□ -1.07
NSE3YDR288W RPL34BP40525 121 aaKnown RBP8.34□□□□□ -1.07
NSE3YDR288W STR2P47164 639 aa8.33□□□□□ -1.08
NSE3YDR288W TBF1Q02457 562 aa8.33□□□□□ -1.08
NSE3YDR288W ERF2Q06551 359 aa8.33□□□□□ -1.08
NSE3YDR288W LAM6Q08001 693 aa8.33□□□□□ -1.08
NSE3YDR288W CHL1P22516 861 aaPredicted RBP8.32□□□□□ -1.08
NSE3YDR288W BIM1P40013 344 aa8.32□□□□□ -1.08
NSE3YDR288W CSE4P36012 229 aa8.31□□□□□ -1.08
NSE3YDR288W PUS6P53294 404 aa8.31□□□□□ -1.08
NSE3YDR288W TRM1P15565 570 aaKnown RBP8.3□□□□□ -1.08
NSE3YDR288W BCK2P33306 851 aa8.3□□□□□ -1.08
NSE3YDR288W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
NSE3YDR288W ATG32P40458 529 aa8.28□□□□□ -1.08
NSE3YDR288W BUD20Q08004 166 aaPredicted RBP8.28□□□□□ -1.08
NSE3YDR288W RAM1P22007 431 aa8.27□□□□□ -1.09
NSE3YDR288W YML082WQ04533 649 aaKnown RBP8.27□□□□□ -1.09
NSE3YDR288W PRT1P06103 763 aaKnown RBP8.26□□□□□ -1.09
NSE3YDR288W PAT1P25644 796 aaKnown RBP8.25□□□□□ -1.09
NSE3YDR288W RSC30P38781 883 aa8.25□□□□□ -1.09
NSE3YDR288W TUB4P53378 473 aa8.24□□□□□ -1.09
NSE3YDR288W YNL108CP53929 270 aa8.24□□□□□ -1.09
NSE3YDR288W TY1A-DR4O74302 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-HP0C2I4 478 aaKnown RBP8.23□□□□□ -1.09
NSE3YDR288W TY1A-AP0CX57 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-PR1P0CX58 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-ORP0CX59 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-PR2P0CX60 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-DR5P0CX65 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-ER2P0CX66 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-GR3P0CX67 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-LR1P0CX68 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-MR2P0CX69 440 aa8.23□□□□□ -1.09
NSE3YDR288W BIO2P32451 375 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-JR2P47099 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-DR1Q03856 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-ML1Q04706 440 aaKnown RBP8.23□□□□□ -1.09
NSE3YDR288W TY1A-BRQ12217 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-NL2Q12470 440 aa8.23□□□□□ -1.09
NSE3YDR288W TY1A-GR2Q12485 440 aa8.23□□□□□ -1.09
NSE3YDR288W YPR015CQ12531 247 aa8.23□□□□□ -1.09
NSE3YDR288W TIF1P10081 395 aaKnown RBP8.22□□□□□ -1.09
NSE3YDR288W SEC2P17065 759 aa8.22□□□□□ -1.09
NSE3YDR288W SPT16P32558 1035 aaKnown RBP8.22□□□□□ -1.09
NSE3YDR288W GYP1Q08484 637 aa8.22□□□□□ -1.09
NSE3YDR288W MAK16P10962 306 aaPredicted RBP8.21□□□□□ -1.1
NSE3YDR288W RRN7P40992 514 aa8.21□□□□□ -1.1
NSE3YDR288W YDL206WQ12424 762 aa8.21□□□□□ -1.1
NSE3YDR288W SPT5P27692 1063 aaKnown RBP8.2□□□□□ -1.1
NSE3YDR288W RTG2P32608 588 aaKnown RBP8.2□□□□□ -1.1
NSE3YDR288W AGE1Q04412 482 aa8.19□□□□□ -1.1
NSE3YDR288W KXD1P53158 218 aa8.18□□□□□ -1.1
NSE3YDR288W ALR1Q08269 859 aa8.18□□□□□ -1.1
NSE3YDR288W YPR204WQ08995 1032 aa8.18□□□□□ -1.1
NSE3YDR288W SAS4Q04003 481 aa8.17□□□□□ -1.1
NSE3YDR288W ERG12P07277 443 aa8.16□□□□□ -1.1
NSE3YDR288W YDJ1P25491 409 aaKnown RBP8.16□□□□□ -1.1
NSE3YDR288W RPA14P50106 137 aa8.16□□□□□ -1.1
NSE3YDR288W PAC1P39946 494 aaKnown RBP8.15□□□□□ -1.1
NSE3YDR288W SUP45P12385 437 aaKnown RBP8.14□□□□□ -1.11
NSE3YDR288W VRP1P37370 817 aa8.14□□□□□ -1.11
NSE3YDR288W NAF1P53919 492 aaKnown RBP8.14□□□□□ -1.11
NSE3YDR288W YPR097WQ06839 1073 aa8.13□□□□□ -1.11
NSE3YDR288W ENO2P00925 437 aaKnown RBP8.12□□□□□ -1.11
NSE3YDR288W YPP1P46951 817 aa8.11□□□□□ -1.11
NSE3YDR288W PDC1P06169 563 aaKnown RBP8.1□□□□□ -1.11
NSE3YDR288W SSA4P22202 642 aaKnown RBP8.1□□□□□ -1.11
NSE3YDR288W MRF1P30775 413 aaPredicted RBP8.1□□□□□ -1.11
NSE3YDR288W HXT10P43581 546 aa8.09□□□□□ -1.11
NSE3YDR288W XDJ1P39102 459 aa8.08□□□□□ -1.12
NSE3YDR288W ENO1P00924 437 aaKnown RBP8.07□□□□□ -1.12
NSE3YDR288W TEC1P18412 486 aa8.07□□□□□ -1.12
NSE3YDR288W MCM16Q12262 181 aa8.07□□□□□ -1.12
NSE3YDR288W CPS1P27614 576 aa8.06□□□□□ -1.12
NSE3YDR288W GUT2P32191 649 aa8.04□□□□□ -1.12
NSE3YDR288W ISF1P32488 338 aa8.04□□□□□ -1.12
NSE3YDR288W TTI1P36097 1038 aa8.04□□□□□ -1.12
NSE3YDR288W RIM21P48565 533 aa8.04□□□□□ -1.12
NSE3YDR288W STE20Q03497 939 aaKnown RBP8.04□□□□□ -1.12
NSE3YDR288W SIS2P36024 562 aa8.03□□□□□ -1.12
NSE3YDR288W EMP47P43555 445 aa8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms