RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A TY1A-DR1Q03856 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-ML1Q04706 440 aaKnown RBP8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-BRQ12217 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-NL2Q12470 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-GR2Q12485 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A SEC2P17065 759 aa7.99□□□□□ -1.13
YDR170W-AYDR170W-A BDP1P46678 594 aa7.99□□□□□ -1.13
YDR170W-AYDR170W-A CSC1Q06538 782 aa7.99□□□□□ -1.13
YDR170W-AYDR170W-A TUM1Q08686 304 aaKnown RBP7.99□□□□□ -1.13
YDR170W-AYDR170W-A YDL176WQ12027 708 aa7.99□□□□□ -1.13
YDR170W-AYDR170W-A GCD11P32481 527 aaKnown RBP7.98□□□□□ -1.13
YDR170W-AYDR170W-A SET1P38827 1080 aaKnown RBP7.97□□□□□ -1.13
YDR170W-AYDR170W-A YDR090CQ03193 310 aa7.97□□□□□ -1.13
YDR170W-AYDR170W-A HED1Q03937 162 aa7.96□□□□□ -1.14
YDR170W-AYDR170W-A LCB5Q06147 687 aaKnown RBP7.95□□□□□ -1.14
YDR170W-AYDR170W-A KIC1P38692 1080 aa7.93□□□□□ -1.14
YDR170W-AYDR170W-A RRN7P40992 514 aa7.9□□□□□ -1.14
YDR170W-AYDR170W-A PAT1P25644 796 aaKnown RBP7.86□□□□□ -1.15
YDR170W-AYDR170W-A ASH1P34233 588 aa7.85□□□□□ -1.15
YDR170W-AYDR170W-A MTC5Q03897 1148 aa7.84□□□□□ -1.15
YDR170W-AYDR170W-A MET32Q12041 191 aa7.84□□□□□ -1.15
YDR170W-AYDR170W-A AFT1P22149 690 aa7.83□□□□□ -1.16
YDR170W-AYDR170W-A ORC6P38826 435 aa7.82□□□□□ -1.16
YDR170W-AYDR170W-A IFH1P39520 1085 aa7.81□□□□□ -1.16
YDR170W-AYDR170W-A RRD1P40454 393 aaKnown RBP7.8□□□□□ -1.16
YDR170W-AYDR170W-A HST3P53687 447 aa7.79□□□□□ -1.16
YDR170W-AYDR170W-A MVP1P40959 511 aaKnown RBP7.75□□□□□ -1.17
YDR170W-AYDR170W-A MOD5P07884 428 aa7.72□□□□□ -1.17
YDR170W-AYDR170W-A YJR115WP47152 169 aa7.72□□□□□ -1.17
YDR170W-AYDR170W-A YPR109WQ06104 294 aa7.7□□□□□ -1.18
YDR170W-AYDR170W-A REF2P42073 533 aaPredicted RBP7.69□□□□□ -1.18
YDR170W-AYDR170W-A PAC1P39946 494 aaKnown RBP7.68□□□□□ -1.18
YDR170W-AYDR170W-A CAF120P53836 1060 aa7.68□□□□□ -1.18
YDR170W-AYDR170W-A KEX2P13134 814 aa7.67□□□□□ -1.18
YDR170W-AYDR170W-A PUS5Q06244 254 aa7.67□□□□□ -1.18
YDR170W-AYDR170W-A ERF2Q06551 359 aa7.67□□□□□ -1.18
YDR170W-AYDR170W-A ACO2P39533 789 aa7.66□□□□□ -1.18
YDR170W-AYDR170W-A RQC2Q12532 1038 aaKnown RBP7.66□□□□□ -1.18
YDR170W-AYDR170W-A RGR1P19263 1082 aa7.64□□□□□ -1.19
YDR170W-AYDR170W-A TRK2P28584 889 aa7.63□□□□□ -1.19
YDR170W-AYDR170W-A MSB3P48566 633 aaPredicted RBP7.59□□□□□ -1.19
YDR170W-AYDR170W-A AGE1Q04412 482 aa7.58□□□□□ -1.2
YDR170W-AYDR170W-A YGR035CP53222 116 aa7.57□□□□□ -1.2
YDR170W-AYDR170W-A COX6P00427 148 aa7.56□□□□□ -1.2
YDR170W-AYDR170W-A MAK21Q12176 1025 aaKnown RBP7.56□□□□□ -1.2
YDR170W-AYDR170W-A TUB4P53378 473 aa7.55□□□□□ -1.2
YDR170W-AYDR170W-A OPT2Q06593 877 aa7.55□□□□□ -1.2
YDR170W-AYDR170W-A YPR148CQ06523 435 aa7.54□□□□□ -1.2
YDR170W-AYDR170W-A YLR346CQ06139 101 aa7.52□□□□□ -1.21
YDR170W-AYDR170W-A HPF1Q05164 967 aa7.51□□□□□ -1.21
YDR170W-AYDR170W-A PTK2P47116 818 aaKnown RBP7.49□□□□□ -1.21
YDR170W-AYDR170W-A UGA3P26370 528 aa7.48□□□□□ -1.21
YDR170W-AYDR170W-A DMA1P38823 416 aa7.48□□□□□ -1.21
YDR170W-AYDR170W-A YIR007WP40566 764 aa7.48□□□□□ -1.21
YDR170W-AYDR170W-A GLY1P37303 387 aaKnown RBP7.47□□□□□ -1.21
YDR170W-AYDR170W-A TPD3P31383 635 aa7.46□□□□□ -1.22
YDR170W-AYDR170W-A SYH1Q02875 849 aaKnown RBP7.46□□□□□ -1.22
YDR170W-AYDR170W-A SRF1Q12516 437 aa7.46□□□□□ -1.22
YDR170W-AYDR170W-A RTF1P53064 558 aa7.44□□□□□ -1.22
YDR170W-AYDR170W-A KXD1P53158 218 aa7.42□□□□□ -1.22
YDR170W-AYDR170W-A SCW11P53189 542 aa7.42□□□□□ -1.22
YDR170W-AYDR170W-A ICP55P40051 511 aa7.41□□□□□ -1.22
YDR170W-AYDR170W-A NUP85P46673 744 aa7.4□□□□□ -1.22
YDR170W-AYDR170W-A TY1A-BLQ12266 440 aa7.4□□□□□ -1.22
YDR170W-AYDR170W-A HXT10P43581 546 aa7.39□□□□□ -1.23
YDR170W-AYDR170W-A YNL115CP53925 644 aa7.39□□□□□ -1.23
YDR170W-AYDR170W-A TYW1Q08960 810 aaKnown RBP7.39□□□□□ -1.23
YDR170W-AYDR170W-A YPR204WQ08995 1032 aa7.39□□□□□ -1.23
YDR170W-AYDR170W-A LSB3P43603 459 aaKnown RBP7.38□□□□□ -1.23
YDR170W-AYDR170W-A PUS1Q12211 544 aaKnown RBP7.38□□□□□ -1.23
YDR170W-AYDR170W-A MIP1P15801 1254 aa7.37□□□□□ -1.23
YDR170W-AYDR170W-A CLB5P30283 435 aa7.37□□□□□ -1.23
YDR170W-AYDR170W-A VPS70P47161 811 aa7.36□□□□□ -1.23
YDR170W-AYDR170W-A PSE1P32337 1089 aaKnown RBP7.35□□□□□ -1.23
YDR170W-AYDR170W-A PDC1P06169 563 aaKnown RBP7.33□□□□□ -1.24
YDR170W-AYDR170W-A MRT4P33201 236 aaKnown RBP7.3□□□□□ -1.24
YDR170W-AYDR170W-A SIT4P20604 311 aa7.29□□□□□ -1.24
YDR170W-AYDR170W-A RTT106P40161 455 aa7.29□□□□□ -1.24
YDR170W-AYDR170W-A KIP2P28743 706 aa7.28□□□□□ -1.24
YDR170W-AYDR170W-A PHM7Q12252 991 aa7.27□□□□□ -1.24
YDR170W-AYDR170W-A DPH6Q12429 685 aa7.27□□□□□ -1.25
YDR170W-AYDR170W-A NRD1P53617 575 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
YDR170W-AYDR170W-A IXR1P33417 597 aa7.24□□□□□ -1.25
YDR170W-AYDR170W-A LSC2P53312 427 aa7.24□□□□□ -1.25
YDR170W-AYDR170W-A UBP2Q01476 1272 aa7.24□□□□□ -1.25
YDR170W-AYDR170W-A ROG3P43602 733 aa7.21□□□□□ -1.26
YDR170W-AYDR170W-A MDJ1P35191 511 aa7.2□□□□□ -1.26
YDR170W-AYDR170W-A ALR1Q08269 859 aa7.2□□□□□ -1.26
YDR170W-AYDR170W-A ARG82P07250 355 aa7.19□□□□□ -1.26
YDR170W-AYDR170W-A AAD14P42884 376 aa7.19□□□□□ -1.26
YDR170W-AYDR170W-A RPA14P50106 137 aa7.19□□□□□ -1.26
YDR170W-AYDR170W-A TY1A-MR1Q04215 440 aa7.18□□□□□ -1.26
YDR170W-AYDR170W-A YJR098CP47139 656 aa7.17□□□□□ -1.26
YDR170W-AYDR170W-A NIS1P53939 407 aa7.17□□□□□ -1.26
YDR170W-AYDR170W-A YPR097WQ06839 1073 aa7.17□□□□□ -1.26
YDR170W-AYDR170W-A CCP1P00431 361 aa7.15□□□□□ -1.26
YDR170W-AYDR170W-A LYS5P50113 272 aa7.15□□□□□ -1.26
YDR170W-AYDR170W-A YDL206WQ12424 762 aa7.15□□□□□ -1.26
YDR170W-AYDR170W-A TCB1Q12466 1186 aa7.15□□□□□ -1.26
YDR170W-AYDR170W-A SLY41P22215 453 aa7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms