RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W TY1A-BRQ12217 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-NL2Q12470 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-GR2Q12485 440 aa5.82□□□□□ -1.48
CDC36YDL165W SEC2P17065 759 aa5.81□□□□□ -1.48
CDC36YDL165W GBP2P25555 427 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
CDC36YDL165W GCD11P32481 527 aaKnown RBP5.8□□□□□ -1.48
CDC36YDL165W SPT16P32558 1035 aaKnown RBP5.8□□□□□ -1.48
CDC36YDL165W ORC6P38826 435 aa5.8□□□□□ -1.48
CDC36YDL165W IFH1P39520 1085 aa5.8□□□□□ -1.48
CDC36YDL165W REF2P42073 533 aaPredicted RBP5.78□□□□□ -1.48
CDC36YDL165W FRK1Q03002 865 aaPredicted RBP5.78□□□□□ -1.48
CDC36YDL165W CDC4P07834 779 aa5.77□□□□□ -1.49
CDC36YDL165W BDP1P46678 594 aa5.75□□□□□ -1.49
CDC36YDL165W MET22P32179 357 aa5.74□□□□□ -1.49
CDC36YDL165W MVP1P40959 511 aaKnown RBP5.74□□□□□ -1.49
CDC36YDL165W RRN7P40992 514 aa5.74□□□□□ -1.49
CDC36YDL165W YPR148CQ06523 435 aa5.74□□□□□ -1.49
CDC36YDL165W HED1Q03937 162 aa5.71□□□□□ -1.5
CDC36YDL165W ENV9Q08651 330 aa5.71□□□□□ -1.5
CDC36YDL165W PAT1P25644 796 aaKnown RBP5.7□□□□□ -1.5
CDC36YDL165W YPR109WQ06104 294 aa5.7□□□□□ -1.5
CDC36YDL165W COX6P00427 148 aa5.69□□□□□ -1.5
CDC36YDL165W RGR1P19263 1082 aa5.69□□□□□ -1.5
CDC36YDL165W MAK21Q12176 1025 aaKnown RBP5.68□□□□□ -1.5
CDC36YDL165W YDR444WQ04093 687 aa5.66□□□□□ -1.5
CDC36YDL165W ERF2Q06551 359 aa5.66□□□□□ -1.5
CDC36YDL165W KEX2P13134 814 aa5.65□□□□□ -1.5
CDC36YDL165W VPS70P47161 811 aa5.64□□□□□ -1.51
CDC36YDL165W MET32Q12041 191 aa5.64□□□□□ -1.51
CDC36YDL165W ASH1P34233 588 aa5.63□□□□□ -1.51
CDC36YDL165W MOD5P07884 428 aa5.62□□□□□ -1.51
CDC36YDL165W PAC1P39946 494 aaKnown RBP5.62□□□□□ -1.51
CDC36YDL165W LCB5Q06147 687 aaKnown RBP5.61□□□□□ -1.51
CDC36YDL165W YDL176WQ12027 708 aa5.61□□□□□ -1.51
CDC36YDL165W AFT1P22149 690 aa5.6□□□□□ -1.51
CDC36YDL165W HST3P53687 447 aa5.58□□□□□ -1.52
CDC36YDL165W AGE1Q04412 482 aa5.58□□□□□ -1.52
CDC36YDL165W PUS5Q06244 254 aa5.58□□□□□ -1.52
CDC36YDL165W TUB4P53378 473 aa5.56□□□□□ -1.52
CDC36YDL165W RRD1P40454 393 aaKnown RBP5.55□□□□□ -1.52
CDC36YDL165W YJR115WP47152 169 aa5.54□□□□□ -1.52
CDC36YDL165W PSE1P32337 1089 aaKnown RBP5.52□□□□□ -1.53
CDC36YDL165W RTF1P53064 558 aa5.51□□□□□ -1.53
CDC36YDL165W CLB5P30283 435 aa5.5□□□□□ -1.53
CDC36YDL165W YNL115CP53925 644 aa5.49□□□□□ -1.53
CDC36YDL165W PBS2P08018 668 aa5.47□□□□□ -1.53
CDC36YDL165W TPD3P31383 635 aa5.46□□□□□ -1.54
CDC36YDL165W MSB3P48566 633 aaPredicted RBP5.46□□□□□ -1.54
CDC36YDL165W SIT4P20604 311 aa5.45□□□□□ -1.54
CDC36YDL165W KXD1P53158 218 aa5.45□□□□□ -1.54
CDC36YDL165W CAF120P53836 1060 aa5.45□□□□□ -1.54
CDC36YDL165W ACO2P39533 789 aa5.44□□□□□ -1.54
CDC36YDL165W HXT10P43581 546 aa5.43□□□□□ -1.54
CDC36YDL165W SYH1Q02875 849 aaKnown RBP5.43□□□□□ -1.54
CDC36YDL165W CKB1P43639 278 aa5.42□□□□□ -1.54
CDC36YDL165W PDC1P06169 563 aaKnown RBP5.41□□□□□ -1.54
CDC36YDL165W MTC5Q03897 1148 aa5.41□□□□□ -1.54
CDC36YDL165W OPT2Q06593 877 aa5.41□□□□□ -1.54
CDC36YDL165W UGA3P26370 528 aa5.4□□□□□ -1.54
CDC36YDL165W PTK2P47116 818 aaKnown RBP5.4□□□□□ -1.54
CDC36YDL165W MAM3Q12296 706 aa5.4□□□□□ -1.54
CDC36YDL165W TEA1P47988 759 aa5.39□□□□□ -1.55
CDC36YDL165W NIS1P53939 407 aa5.39□□□□□ -1.55
CDC36YDL165W YLR346CQ06139 101 aa5.38□□□□□ -1.55
CDC36YDL165W TRK2P28584 889 aa5.37□□□□□ -1.55
CDC36YDL165W SRF1Q12516 437 aa5.37□□□□□ -1.55
CDC36YDL165W IES2P40154 320 aa5.36□□□□□ -1.55
CDC36YDL165W SLY41P22215 453 aa5.35□□□□□ -1.55
CDC36YDL165W GLY1P37303 387 aaKnown RBP5.35□□□□□ -1.55
CDC36YDL165W YGR035CP53222 116 aa5.35□□□□□ -1.55
CDC36YDL165W KIP2P28743 706 aa5.34□□□□□ -1.55
CDC36YDL165W MRT4P33201 236 aaKnown RBP5.34□□□□□ -1.55
CDC36YDL165W YIR007WP40566 764 aa5.34□□□□□ -1.55
CDC36YDL165W NUP85P46673 744 aa5.34□□□□□ -1.55
CDC36YDL165W IXR1P33417 597 aa5.33□□□□□ -1.56
CDC36YDL165W DSF2P38213 736 aa5.33□□□□□ -1.56
CDC36YDL165W NUP42P49686 430 aaKnown RBP5.33□□□□□ -1.56
CDC36YDL165W RPA14P50106 137 aa5.33□□□□□ -1.56
CDC36YDL165W FPK1P53739 893 aa5.32□□□□□ -1.56
CDC36YDL165W HPF1Q05164 967 aa5.32□□□□□ -1.56
CDC36YDL165W YPR097WQ06839 1073 aa5.32□□□□□ -1.56
CDC36YDL165W ALR1Q08269 859 aa5.32□□□□□ -1.56
CDC36YDL165W TYW1Q08960 810 aaKnown RBP5.32□□□□□ -1.56
CDC36YDL165W TY1A-BLQ12266 440 aa5.32□□□□□ -1.56
CDC36YDL165W MIP1P15801 1254 aa5.31□□□□□ -1.56
CDC36YDL165W SCW11P53189 542 aa5.31□□□□□ -1.56
CDC36YDL165W PUS6P53294 404 aa5.31□□□□□ -1.56
CDC36YDL165W YDL206WQ12424 762 aa5.31□□□□□ -1.56
CDC36YDL165W RTT106P40161 455 aa5.29□□□□□ -1.56
CDC36YDL165W TBF1Q02457 562 aa5.29□□□□□ -1.56
CDC36YDL165W YMR196WQ04336 1088 aa5.29□□□□□ -1.56
CDC36YDL165W DIT2P21595 489 aa5.27□□□□□ -1.57
CDC36YDL165W TRM1P15565 570 aaKnown RBP5.26□□□□□ -1.57
CDC36YDL165W SCJ1P25303 377 aa5.25□□□□□ -1.57
CDC36YDL165W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
CDC36YDL165W ARG82P07250 355 aa5.24□□□□□ -1.57
CDC36YDL165W AAD14P42884 376 aa5.24□□□□□ -1.57
CDC36YDL165W LSC2P53312 427 aa5.24□□□□□ -1.57
CDC36YDL165W UBP2Q01476 1272 aa5.23□□□□□ -1.57
CDC36YDL165W YBL086CP38177 466 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms