RNA–Protein interactions for RNA: YDL033C

SLM3, Transcript of tRNA-specific 2-thiouridylase, yeastyeast

Gene SLM3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLM3YDL033C TY3B-IQ7LHG5 1498 aaKnown RBP10.44□□□□□ -0.74
SLM3YDL033C ALD4P46367 519 aaKnown RBP10.44□□□□□ -0.74
SLM3YDL033C YMR074CQ04773 145 aa10.43□□□□□ -0.74
SLM3YDL033C POL5P39985 1022 aaKnown RBP10.42□□□□□ -0.74
SLM3YDL033C ENV9Q08651 330 aa10.41□□□□□ -0.74
SLM3YDL033C RTC1Q08281 1341 aa10.39□□□□□ -0.75
SLM3YDL033C IMH1Q06704 911 aaKnown RBP10.37□□□□□ -0.75
SLM3YDL033C YRF1-2P40105 1681 aa10.36□□□□□ -0.75
SLM3YDL033C CAB3P36076 571 aa10.35□□□□□ -0.75
SLM3YDL033C RRP5Q05022 1729 aaKnown RBP10.35□□□□□ -0.75
SLM3YDL033C SEC3P33332 1336 aaKnown RBP10.34□□□□□ -0.75
SLM3YDL033C NOP7P53261 605 aaKnown RBP10.32□□□□□ -0.76
SLM3YDL033C NAP1P25293 417 aaKnown RBP10.31□□□□□ -0.76
SLM3YDL033C BUD31P25337 157 aaPredicted RBP10.3□□□□□ -0.76
SLM3YDL033C PRP45P28004 379 aaPredicted RBP10.3□□□□□ -0.76
SLM3YDL033C TAF5P38129 798 aa10.3□□□□□ -0.76
SLM3YDL033C EBP2P36049 427 aaKnown RBP10.27□□□□□ -0.77
SLM3YDL033C RPL17AP05740 184 aaKnown RBP10.26□□□□□ -0.77
SLM3YDL033C CPS1P27614 576 aa10.26□□□□□ -0.77
SLM3YDL033C RPL17BP46990 184 aaKnown RBP10.26□□□□□ -0.77
SLM3YDL033C RCM1P53972 490 aa10.25□□□□□ -0.77
SLM3YDL033C TAF8Q03750 510 aa10.25□□□□□ -0.77
SLM3YDL033C SPT7P35177 1332 aa10.23□□□□□ -0.77
SLM3YDL033C TY4B-HP0C2J7 1802 aa10.22□□□□□ -0.77
SLM3YDL033C TY4B-JP47024 1803 aa10.22□□□□□ -0.77
SLM3YDL033C LEU3P08638 886 aa10.22□□□□□ -0.77
SLM3YDL033C ESL2P36168 1195 aa10.22□□□□□ -0.77
SLM3YDL033C PRP5P21372 849 aaPredicted RBP10.21□□□□□ -0.77
SLM3YDL033C UBP1P25037 809 aa10.19□□□□□ -0.78
SLM3YDL033C PPH3P32345 308 aa10.18□□□□□ -0.78
SLM3YDL033C MSB3P48566 633 aaPredicted RBP10.15□□□□□ -0.78
SLM3YDL033C URB1P34241 1764 aaKnown RBP10.15□□□□□ -0.78
SLM3YDL033C RPN11P43588 306 aaKnown RBP10.14□□□□□ -0.79
SLM3YDL033C PSK1P31374 1356 aa10.13□□□□□ -0.79
SLM3YDL033C IES2P40154 320 aa10.12□□□□□ -0.79
SLM3YDL033C ADE6P38972 1358 aaKnown RBP10.12□□□□□ -0.79
SLM3YDL033C PRS1P32895 427 aaKnown RBP10.11□□□□□ -0.79
SLM3YDL033C YBL086CP38177 466 aa10.11□□□□□ -0.79
SLM3YDL033C DOT5P40553 215 aa10.11□□□□□ -0.79
SLM3YDL033C PRY3P47033 881 aa10.11□□□□□ -0.79
SLM3YDL033C YPR148CQ06523 435 aa10.1□□□□□ -0.79
SLM3YDL033C TSR3Q12094 313 aaKnown RBP10.09□□□□□ -0.79
SLM3YDL033C TCB1Q12466 1186 aa10.09□□□□□ -0.79
SLM3YDL033C FKS3Q04952 1785 aa10.09□□□□□ -0.79
SLM3YDL033C RSF2P46974 1380 aa10.07□□□□□ -0.8
SLM3YDL033C ROM2P51862 1356 aaKnown RBP10.07□□□□□ -0.8
SLM3YDL033C SPE2P21182 396 aa10.07□□□□□ -0.8
SLM3YDL033C EDE1P34216 1381 aa10.06□□□□□ -0.8
SLM3YDL033C UGA2P38067 497 aa10.06□□□□□ -0.8
SLM3YDL033C YJL181WP46987 611 aa10.06□□□□□ -0.8
SLM3YDL033C FOX2Q02207 900 aaKnown RBP10.06□□□□□ -0.8
SLM3YDL033C GTT3P39996 337 aa10.04□□□□□ -0.8
SLM3YDL033C KIP3P53086 805 aaKnown RBP10.04□□□□□ -0.8
SLM3YDL033C SLM3Q12093 417 aa10.04□□□□□ -0.8
SLM3YDL033C CSE4P36012 229 aa10.03□□□□□ -0.8
SLM3YDL033C NPR2P39923 615 aa10.03□□□□□ -0.8
SLM3YDL033C LYS4P49367 693 aaPredicted RBP10.03□□□□□ -0.8
SLM3YDL033C YEF3P16521 1044 aaKnown RBP10.01□□□□□ -0.81
SLM3YDL033C ALD2P47771 506 aa10.01□□□□□ -0.81
SLM3YDL033C LAM6Q08001 693 aa10.01□□□□□ -0.81
SLM3YDL033C YRF1-3P0CX14 1859 aa10.01□□□□□ -0.81
SLM3YDL033C YRF1-7P0CX15 1859 aa10.01□□□□□ -0.81
SLM3YDL033C YRF1-6P53819 1859 aa10.01□□□□□ -0.81
SLM3YDL033C LEU2P04173 364 aaPredicted RBP10□□□□□ -0.81
SLM3YDL033C RPS24AP0CX31 135 aaKnown RBP10□□□□□ -0.81
SLM3YDL033C RPS24BP0CX32 135 aaKnown RBP10□□□□□ -0.81
SLM3YDL033C PRP40P33203 583 aaKnown RBP10□□□□□ -0.81
SLM3YDL033C MTR4P47047 1073 aaKnown RBP10□□□□□ -0.81
SLM3YDL033C SSA2P10592 639 aaKnown RBP9.99□□□□□ -0.81
SLM3YDL033C YKL133CP36066 463 aa9.99□□□□□ -0.81
SLM3YDL033C PRP43P53131 767 aaKnown RBP9.99□□□□□ -0.81
SLM3YDL033C CHZ1P40019 153 aaPredicted RBP9.98□□□□□ -0.81
SLM3YDL033C COBP00163 385 aa9.96□□□□□ -0.82
SLM3YDL033C SSA1P10591 642 aaKnown RBP9.96□□□□□ -0.82
SLM3YDL033C XKS1P42826 600 aa9.96□□□□□ -0.82
SLM3YDL033C YIL177CP40434 1758 aa9.94□□□□□ -0.82
SLM3YDL033C YJL225CP40889 1758 aa9.94□□□□□ -0.82
SLM3YDL033C CTH1P47976 325 aa9.94□□□□□ -0.82
SLM3YDL033C APC1P53886 1748 aa9.93□□□□□ -0.82
SLM3YDL033C YRF1-4O13559 1382 aa9.93□□□□□ -0.82
SLM3YDL033C YKR075CP36155 307 aa9.93□□□□□ -0.82
SLM3YDL033C ORC1P54784 914 aaPredicted RBP9.92□□□□□ -0.82
SLM3YDL033C YLR419WQ06698 1435 aaKnown RBP9.91□□□□□ -0.82
SLM3YDL033C CLC1P17891 233 aa9.91□□□□□ -0.82
SLM3YDL033C SPT21P35209 758 aa9.91□□□□□ -0.82
SLM3YDL033C MNN4P36044 1178 aa9.91□□□□□ -0.82
SLM3YDL033C MHP1P43638 1398 aa9.88□□□□□ -0.83
SLM3YDL033C IME2P32581 645 aa9.86□□□□□ -0.83
SLM3YDL033C PSD2P53037 1138 aaKnown RBP9.86□□□□□ -0.83
SLM3YDL033C EAF7P53911 425 aaKnown RBP9.86□□□□□ -0.83
SLM3YDL033C YML133CQ03099 1374 aa9.86□□□□□ -0.83
SLM3YDL033C YLL067CQ07888 1374 aa9.86□□□□□ -0.83
SLM3YDL033C YLL066CQ99208 1374 aa9.86□□□□□ -0.83
SLM3YDL033C DPS1P04802 557 aaKnown RBP9.85□□□□□ -0.83
SLM3YDL033C SCT1P32784 759 aa9.85□□□□□ -0.83
SLM3YDL033C MEC3Q02574 474 aa9.85□□□□□ -0.83
SLM3YDL033C FRK1Q03002 865 aaPredicted RBP9.85□□□□□ -0.83
SLM3YDL033C SNF2P22082 1703 aa9.85□□□□□ -0.83
SLM3YDL033C GAS4Q08271 471 aa9.83□□□□□ -0.84
SLM3YDL033C BDF1P35817 686 aa9.82□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms