RNA–Protein interactions for RNA: YBR286W

APE3, Transcript of Vacuolar aminopeptidase Y, yeastyeast

Gene APE3, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE3YBR286W NST1P53935 1240 aa7.75□□□□□ -1.17
APE3YBR286W NAP1P25293 417 aaKnown RBP7.74□□□□□ -1.17
APE3YBR286W RCM1P53972 490 aa7.74□□□□□ -1.17
APE3YBR286W PPH3P32345 308 aa7.74□□□□□ -1.17
APE3YBR286W CHZ1P40019 153 aaPredicted RBP7.74□□□□□ -1.17
APE3YBR286W TY4B-HP0C2J7 1802 aa7.73□□□□□ -1.17
APE3YBR286W TY4B-JP47024 1803 aa7.73□□□□□ -1.17
APE3YBR286W PSK1P31374 1356 aa7.73□□□□□ -1.17
APE3YBR286W LEU3P08638 886 aa7.72□□□□□ -1.17
APE3YBR286W NSR1P27476 414 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
APE3YBR286W RTG3P38165 486 aa7.71□□□□□ -1.17
APE3YBR286W FKH1P40466 484 aa7.7□□□□□ -1.18
APE3YBR286W THI12P42883 340 aa7.7□□□□□ -1.18
APE3YBR286W THI5P43534 340 aa7.7□□□□□ -1.18
APE3YBR286W THI11P47183 340 aa7.7□□□□□ -1.18
APE3YBR286W THI13Q07748 340 aa7.7□□□□□ -1.18
APE3YBR286W CPS1P27614 576 aa7.7□□□□□ -1.18
APE3YBR286W YMR196WQ04336 1088 aa7.7□□□□□ -1.18
APE3YBR286W SCT1P32784 759 aa7.67□□□□□ -1.18
APE3YBR286W ENP1P38333 483 aaKnown RBP7.67□□□□□ -1.18
APE3YBR286W YIL177CP40434 1758 aa7.67□□□□□ -1.18
APE3YBR286W YJL225CP40889 1758 aa7.67□□□□□ -1.18
APE3YBR286W YEF3P16521 1044 aaKnown RBP7.64□□□□□ -1.19
APE3YBR286W ADE6P38972 1358 aaKnown RBP7.64□□□□□ -1.19
APE3YBR286W SNF2P22082 1703 aa7.62□□□□□ -1.19
APE3YBR286W TRK1P12685 1235 aa7.62□□□□□ -1.19
APE3YBR286W RRP5Q05022 1729 aaKnown RBP7.61□□□□□ -1.19
APE3YBR286W LEU2P04173 364 aaPredicted RBP7.6□□□□□ -1.19
APE3YBR286W AUS1Q08409 1394 aa7.6□□□□□ -1.19
APE3YBR286W YFR006WP43590 535 aa7.6□□□□□ -1.19
APE3YBR286W MTR4P47047 1073 aaKnown RBP7.6□□□□□ -1.19
APE3YBR286W YRF1-2P40105 1681 aa7.59□□□□□ -1.2
APE3YBR286W URB1P34241 1764 aaKnown RBP7.57□□□□□ -1.2
APE3YBR286W RPS24AP0CX31 135 aaKnown RBP7.57□□□□□ -1.2
APE3YBR286W RPS24BP0CX32 135 aaKnown RBP7.57□□□□□ -1.2
APE3YBR286W PRP43P53131 767 aaKnown RBP7.57□□□□□ -1.2
APE3YBR286W FKS3Q04952 1785 aa7.57□□□□□ -1.2
APE3YBR286W TAP42Q04372 366 aa7.56□□□□□ -1.2
APE3YBR286W HIM1Q06674 414 aa7.56□□□□□ -1.2
APE3YBR286W PDI1P17967 522 aaKnown RBP7.56□□□□□ -1.2
APE3YBR286W PRS1P32895 427 aaKnown RBP7.56□□□□□ -1.2
APE3YBR286W CSE4P36012 229 aa7.56□□□□□ -1.2
APE3YBR286W PTP3P40048 928 aa7.55□□□□□ -1.2
APE3YBR286W RRP46P53256 223 aaPredicted RBP7.54□□□□□ -1.2
APE3YBR286W KAR2P16474 682 aaKnown RBP7.52□□□□□ -1.2
APE3YBR286W APC1P53886 1748 aa7.52□□□□□ -1.21
APE3YBR286W RTF1P53064 558 aa7.52□□□□□ -1.21
APE3YBR286W GAS4Q08271 471 aa7.52□□□□□ -1.21
APE3YBR286W DPS1P04802 557 aaKnown RBP7.5□□□□□ -1.21
APE3YBR286W GRX4P32642 244 aa7.5□□□□□ -1.21
APE3YBR286W IOC4Q04213 475 aa7.5□□□□□ -1.21
APE3YBR286W PRP45P28004 379 aaPredicted RBP7.49□□□□□ -1.21
APE3YBR286W RPO41P13433 1351 aaKnown RBP7.48□□□□□ -1.21
APE3YBR286W PRP5P21372 849 aaPredicted RBP7.48□□□□□ -1.21
APE3YBR286W MSB3P48566 633 aaPredicted RBP7.48□□□□□ -1.21
APE3YBR286W YDL144CQ07589 356 aa7.48□□□□□ -1.21
APE3YBR286W YRF1-3P0CX14 1859 aa7.47□□□□□ -1.21
APE3YBR286W YRF1-7P0CX15 1859 aa7.47□□□□□ -1.21
APE3YBR286W YRF1-6P53819 1859 aa7.47□□□□□ -1.21
APE3YBR286W MPP10P47083 593 aaKnown RBP7.47□□□□□ -1.21
APE3YBR286W RTR1P40084 226 aaPredicted RBP7.46□□□□□ -1.21
APE3YBR286W PAP2P53632 584 aaKnown RBP7.46□□□□□ -1.21
APE3YBR286W REB1P21538 810 aa7.45□□□□□ -1.22
APE3YBR286W SLM3Q12093 417 aa7.45□□□□□ -1.22
APE3YBR286W YRF1-4O13559 1382 aa7.45□□□□□ -1.22
APE3YBR286W RPP0P05317 312 aaKnown RBP7.45□□□□□ -1.22
APE3YBR286W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
APE3YBR286W VPS27P40343 622 aaKnown RBP7.44□□□□□ -1.22
APE3YBR286W FAP1P53971 965 aa7.44□□□□□ -1.22
APE3YBR286W SUI2P20459 304 aaKnown RBP7.43□□□□□ -1.22
APE3YBR286W THI22Q06490 572 aa7.43□□□□□ -1.22
APE3YBR286W PRD1P25375 712 aa7.42□□□□□ -1.22
APE3YBR286W APP1P53933 587 aa7.42□□□□□ -1.22
APE3YBR286W AKL1P38080 1108 aaKnown RBP7.41□□□□□ -1.22
APE3YBR286W CDC45Q08032 650 aa7.41□□□□□ -1.22
APE3YBR286W RVB2Q12464 471 aaKnown RBP7.41□□□□□ -1.22
APE3YBR286W ENT1Q12518 454 aa7.41□□□□□ -1.22
APE3YBR286W RSF2P46974 1380 aa7.41□□□□□ -1.22
APE3YBR286W FUN12P39730 1002 aaKnown RBP7.4□□□□□ -1.22
APE3YBR286W XKS1P42826 600 aa7.4□□□□□ -1.22
APE3YBR286W SAP155P43612 1002 aa7.4□□□□□ -1.22
APE3YBR286W HEF3P53978 1044 aaKnown RBP7.4□□□□□ -1.22
APE3YBR286W TCB1Q12466 1186 aa7.4□□□□□ -1.22
APE3YBR286W DSD1P53095 428 aa7.39□□□□□ -1.23
APE3YBR286W RTT109Q07794 436 aa7.39□□□□□ -1.23
APE3YBR286W YAH1Q12184 172 aaKnown RBP7.39□□□□□ -1.23
APE3YBR286W ENV9Q08651 330 aa7.38□□□□□ -1.23
APE3YBR286W SIR4P11978 1358 aa7.38□□□□□ -1.23
APE3YBR286W TPD3P31383 635 aa7.38□□□□□ -1.23
APE3YBR286W RCR1P38212 213 aa7.37□□□□□ -1.23
APE3YBR286W HSP104P31539 908 aaKnown RBP7.35□□□□□ -1.23
APE3YBR286W NTH2P35172 780 aa7.35□□□□□ -1.23
APE3YBR286W ISW2Q08773 1120 aa7.35□□□□□ -1.23
APE3YBR286W IES2P40154 320 aa7.34□□□□□ -1.23
APE3YBR286W RIM15P43565 1770 aa7.34□□□□□ -1.23
APE3YBR286W YNL050CP53952 270 aa7.33□□□□□ -1.24
APE3YBR286W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
APE3YBR286W IMH1Q06704 911 aaKnown RBP7.33□□□□□ -1.24
APE3YBR286W INP54Q08227 384 aaKnown RBP7.33□□□□□ -1.24
APE3YBR286W YRB30P53107 440 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 132.9 ms