RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C NAP1P25293 417 aaKnown RBP6.26□□□□□ -1.41
ROT2YBR229C YEF3P16521 1044 aaKnown RBP6.26□□□□□ -1.41
ROT2YBR229C YML133CQ03099 1374 aa6.25□□□□□ -1.41
ROT2YBR229C YLL067CQ07888 1374 aa6.25□□□□□ -1.41
ROT2YBR229C YLL066CQ99208 1374 aa6.25□□□□□ -1.41
ROT2YBR229C YDL144CQ07589 356 aa6.25□□□□□ -1.41
ROT2YBR229C TRK1P12685 1235 aa6.24□□□□□ -1.41
ROT2YBR229C ITT1Q04638 464 aa6.24□□□□□ -1.41
ROT2YBR229C CAB1Q04430 367 aa6.23□□□□□ -1.41
ROT2YBR229C FUN12P39730 1002 aaKnown RBP6.23□□□□□ -1.41
ROT2YBR229C SUI2P20459 304 aaKnown RBP6.22□□□□□ -1.41
ROT2YBR229C DNF3Q12674 1656 aa6.22□□□□□ -1.41
ROT2YBR229C RPC31P17890 251 aa6.21□□□□□ -1.41
ROT2YBR229C FPR3P38911 411 aaKnown RBP6.21□□□□□ -1.41
ROT2YBR229C PSK1P31374 1356 aa6.21□□□□□ -1.42
ROT2YBR229C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
ROT2YBR229C MPP10P47083 593 aaKnown RBP6.19□□□□□ -1.42
ROT2YBR229C RRP46P53256 223 aaPredicted RBP6.18□□□□□ -1.42
ROT2YBR229C TAP42Q04372 366 aa6.17□□□□□ -1.42
ROT2YBR229C KRE5P22023 1365 aa6.17□□□□□ -1.42
ROT2YBR229C RTR1P40084 226 aaPredicted RBP6.17□□□□□ -1.42
ROT2YBR229C ABP1P15891 592 aaKnown RBP6.16□□□□□ -1.42
ROT2YBR229C IME2P32581 645 aa6.16□□□□□ -1.42
ROT2YBR229C OPY1P38271 328 aa6.16□□□□□ -1.42
ROT2YBR229C YIR014WP40570 242 aa6.16□□□□□ -1.42
ROT2YBR229C SAP155P43612 1002 aa6.16□□□□□ -1.42
ROT2YBR229C MRX12P47084 519 aa6.16□□□□□ -1.42
ROT2YBR229C KAR2P16474 682 aaKnown RBP6.15□□□□□ -1.43
ROT2YBR229C RAD2P07276 1031 aa6.14□□□□□ -1.43
ROT2YBR229C PPH3P32345 308 aa6.14□□□□□ -1.43
ROT2YBR229C RCM1P53972 490 aa6.14□□□□□ -1.43
ROT2YBR229C SIR4P11978 1358 aa6.14□□□□□ -1.43
ROT2YBR229C USO1P25386 1790 aa6.14□□□□□ -1.43
ROT2YBR229C PDI1P17967 522 aaKnown RBP6.13□□□□□ -1.43
ROT2YBR229C PRD1P25375 712 aa6.13□□□□□ -1.43
ROT2YBR229C BUD27P43573 796 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
ROT2YBR229C AUS1Q08409 1394 aa6.13□□□□□ -1.43
ROT2YBR229C THI22Q06490 572 aa6.13□□□□□ -1.43
ROT2YBR229C YRF1-4O13559 1382 aa6.13□□□□□ -1.43
ROT2YBR229C LEU2P04173 364 aaPredicted RBP6.12□□□□□ -1.43
ROT2YBR229C GRX4P32642 244 aa6.12□□□□□ -1.43
ROT2YBR229C RIA1P53893 1110 aa6.12□□□□□ -1.43
ROT2YBR229C HEF3P53978 1044 aaKnown RBP6.12□□□□□ -1.43
ROT2YBR229C YIL092WP40497 633 aa6.12□□□□□ -1.43
ROT2YBR229C TY1B-NL2Q99337 1749 aaKnown RBP6.11□□□□□ -1.43
ROT2YBR229C TPD3P31383 635 aa6.11□□□□□ -1.43
ROT2YBR229C MTR4P47047 1073 aaKnown RBP6.11□□□□□ -1.43
ROT2YBR229C HIM1Q06674 414 aa6.11□□□□□ -1.43
ROT2YBR229C RTF1P53064 558 aa6.11□□□□□ -1.43
ROT2YBR229C CPS1P27614 576 aa6.1□□□□□ -1.43
ROT2YBR229C APC1P53886 1748 aa6.1□□□□□ -1.43
ROT2YBR229C YFR016CP43597 1233 aaKnown RBP6.09□□□□□ -1.43
ROT2YBR229C PAP2P53632 584 aaKnown RBP6.09□□□□□ -1.43
ROT2YBR229C RPO41P13433 1351 aaKnown RBP6.09□□□□□ -1.44
ROT2YBR229C CLC1P17891 233 aa6.08□□□□□ -1.44
ROT2YBR229C POL32P47110 350 aa6.08□□□□□ -1.44
ROT2YBR229C PRP43P53131 767 aaKnown RBP6.08□□□□□ -1.44
ROT2YBR229C EAF7P53911 425 aaKnown RBP6.08□□□□□ -1.44
ROT2YBR229C DAL5P15365 543 aa6.08□□□□□ -1.44
ROT2YBR229C RTT109Q07794 436 aa6.08□□□□□ -1.44
ROT2YBR229C MAK21Q12176 1025 aaKnown RBP6.08□□□□□ -1.44
ROT2YBR229C YNR029CP53729 429 aaKnown RBP6.07□□□□□ -1.44
ROT2YBR229C ADE6P38972 1358 aaKnown RBP6.07□□□□□ -1.44
ROT2YBR229C MAK10Q02197 733 aa6.07□□□□□ -1.44
ROT2YBR229C CSE4P36012 229 aa6.05□□□□□ -1.44
ROT2YBR229C SNF7P39929 240 aaKnown RBP6.04□□□□□ -1.44
ROT2YBR229C YRF1-2P40105 1681 aa6.03□□□□□ -1.44
ROT2YBR229C RPS24AP0CX31 135 aaKnown RBP6.02□□□□□ -1.45
ROT2YBR229C RPS24BP0CX32 135 aaKnown RBP6.02□□□□□ -1.45
ROT2YBR229C YPR148CQ06523 435 aa6.02□□□□□ -1.45
ROT2YBR229C PCT1P13259 424 aa6.02□□□□□ -1.45
ROT2YBR229C PUF6Q04373 656 aaKnown RBP6.02□□□□□ -1.45
ROT2YBR229C AKL1P38080 1108 aaKnown RBP6.01□□□□□ -1.45
ROT2YBR229C YNL050CP53952 270 aa6.01□□□□□ -1.45
ROT2YBR229C GAS4Q08271 471 aa6.01□□□□□ -1.45
ROT2YBR229C TY4B-HP0C2J7 1802 aa6.01□□□□□ -1.45
ROT2YBR229C TY4B-JP47024 1803 aa6.01□□□□□ -1.45
ROT2YBR229C DSD1P53095 428 aa6.01□□□□□ -1.45
ROT2YBR229C RRP5Q05022 1729 aaKnown RBP6.01□□□□□ -1.45
ROT2YBR229C DPS1P04802 557 aaKnown RBP6□□□□□ -1.45
ROT2YBR229C GYP7P48365 746 aa6□□□□□ -1.45
ROT2YBR229C MAM1P40065 302 aa6□□□□□ -1.45
ROT2YBR229C ECM16Q04217 1267 aaKnown RBP6□□□□□ -1.45
ROT2YBR229C ROX1P25042 368 aa6□□□□□ -1.45
ROT2YBR229C EDE1P34216 1381 aa6□□□□□ -1.45
ROT2YBR229C YIL177CP40434 1758 aa6□□□□□ -1.45
ROT2YBR229C YJL225CP40889 1758 aa6□□□□□ -1.45
ROT2YBR229C TRP5P00931 707 aaKnown RBP5.99□□□□□ -1.45
ROT2YBR229C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
ROT2YBR229C LSP1Q12230 341 aaKnown RBP5.98□□□□□ -1.45
ROT2YBR229C NTH2P35172 780 aa5.98□□□□□ -1.45
ROT2YBR229C VPS24P36095 224 aaKnown RBP5.98□□□□□ -1.45
ROT2YBR229C ZDS1P50111 915 aaKnown RBP5.98□□□□□ -1.45
ROT2YBR229C RRT14P40470 206 aa5.97□□□□□ -1.45
ROT2YBR229C YPP1P46951 817 aa5.97□□□□□ -1.45
ROT2YBR229C SRT1Q03175 343 aa5.97□□□□□ -1.45
ROT2YBR229C FKS3Q04952 1785 aa5.96□□□□□ -1.46
ROT2YBR229C URB1P34241 1764 aaKnown RBP5.95□□□□□ -1.46
ROT2YBR229C MSP1P28737 362 aa5.94□□□□□ -1.46
ROT2YBR229C ILV3P39522 585 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 64.5 ms