RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	HGH1	P48362	394 aa	Known RBP	7.85	□□□□□ -1.15
SMP1	YBR182C	PAT1	P25644	796 aa	Known RBP	7.84	□□□□□ -1.16
SMP1	YBR182C	RGR1	P19263	1082 aa		7.83	□□□□□ -1.16
SMP1	YBR182C	MAM3	Q12296	706 aa		7.81	□□□□□ -1.16
SMP1	YBR182C	KIN1	P13185	1064 aa		7.79	□□□□□ -1.16
SMP1	YBR182C	DSF2	P38213	736 aa		7.79	□□□□□ -1.16
SMP1	YBR182C	YNR021W	P53723	404 aa	Known RBP	7.78	□□□□□ -1.16
SMP1	YBR182C	PSE1	P32337	1089 aa	Known RBP	7.77	□□□□□ -1.17
SMP1	YBR182C	TY1A-DR4	O74302	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-H	P0C2I4	478 aa	Known RBP	7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-A	P0CX57	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-PR1	P0CX58	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-OR	P0CX59	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-PR2	P0CX60	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-DR5	P0CX65	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-ER2	P0CX66	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-GR3	P0CX67	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-LR1	P0CX68	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-MR2	P0CX69	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-JR2	P47099	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-DR1	Q03856	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-ML1	Q04706	440 aa	Known RBP	7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-BR	Q12217	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-NL2	Q12470	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	TY1A-GR2	Q12485	440 aa		7.76	□□□□□ -1.17
SMP1	YBR182C	RRN7	P40992	514 aa		7.75	□□□□□ -1.17
SMP1	YBR182C	CLB5	P30283	435 aa		7.74	□□□□□ -1.17
SMP1	YBR182C	SEC2	P17065	759 aa		7.73	□□□□□ -1.17
SMP1	YBR182C	RGA1	P39083	1007 aa		7.73	□□□□□ -1.17
SMP1	YBR182C	CST6	P40535	587 aa		7.72	□□□□□ -1.17
SMP1	YBR182C	KEX2	P13134	814 aa		7.71	□□□□□ -1.18
SMP1	YBR182C	IES2	P40154	320 aa		7.71	□□□□□ -1.18
SMP1	YBR182C	FRK1	Q03002	865 aa	Predicted RBP	7.71	□□□□□ -1.18
SMP1	YBR182C	AIM7	Q12156	149 aa		7.7	□□□□□ -1.18
SMP1	YBR182C	GCR2	Q01722	534 aa		7.69	□□□□□ -1.18
SMP1	YBR182C	LAM6	Q08001	693 aa		7.69	□□□□□ -1.18
SMP1	YBR182C	TEA1	P47988	759 aa		7.68	□□□□□ -1.18
SMP1	YBR182C	GLC3	P32775	704 aa		7.66	□□□□□ -1.18
SMP1	YBR182C	AIR1	P40507	360 aa	Known RBP	7.66	□□□□□ -1.18
SMP1	YBR182C	CLA4	P48562	842 aa		7.65	□□□□□ -1.18
SMP1	YBR182C	AIM44	Q99299	758 aa		7.65	□□□□□ -1.18
SMP1	YBR182C	BDP1	P46678	594 aa		7.64	□□□□□ -1.19
SMP1	YBR182C	ERF2	Q06551	359 aa		7.64	□□□□□ -1.19
SMP1	YBR182C	BRE2	P43132	505 aa		7.62	□□□□□ -1.19
SMP1	YBR182C	YNL115C	P53925	644 aa		7.61	□□□□□ -1.19
SMP1	YBR182C	RTF1	P53064	558 aa		7.6	□□□□□ -1.19
SMP1	YBR182C	GUA1	P38625	525 aa	Known RBP	7.59	□□□□□ -1.19
SMP1	YBR182C	NUP42	P49686	430 aa	Known RBP	7.59	□□□□□ -1.19
SMP1	YBR182C	TUB4	P53378	473 aa		7.59	□□□□□ -1.2
SMP1	YBR182C	HED1	Q03937	162 aa		7.59	□□□□□ -1.2
SMP1	YBR182C	CDC4	P07834	779 aa		7.58	□□□□□ -1.2
SMP1	YBR182C	DIT2	P21595	489 aa		7.58	□□□□□ -1.2
SMP1	YBR182C	YMR196W	Q04336	1088 aa		7.58	□□□□□ -1.2
SMP1	YBR182C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.57	□□□□□ -1.2	not detected
SMP1	YBR182C	PAC1	P39946	494 aa	Known RBP	7.56	□□□□□ -1.2
SMP1	YBR182C	ATF2	P53296	535 aa		7.56	□□□□□ -1.2
SMP1	YBR182C	HPC2	Q01448	625 aa		7.55	□□□□□ -1.2
SMP1	YBR182C	YML020W	Q03722	664 aa		7.55	□□□□□ -1.2
SMP1	YBR182C	KXD1	P53158	218 aa		7.54	□□□□□ -1.2
SMP1	YBR182C	NIS1	P53939	407 aa		7.54	□□□□□ -1.2
SMP1	YBR182C	SIT4	P20604	311 aa		7.53	□□□□□ -1.2
SMP1	YBR182C	AGE1	Q04412	482 aa		7.53	□□□□□ -1.2
SMP1	YBR182C	SLY41	P22215	453 aa		7.52	□□□□□ -1.21
SMP1	YBR182C	GAR1	P28007	205 aa	Known RBP	7.52	□□□□□ -1.21
SMP1	YBR182C	HST3	P53687	447 aa		7.51	□□□□□ -1.21
SMP1	YBR182C	MOD5	P07884	428 aa		7.5	□□□□□ -1.21
SMP1	YBR182C	SSA1	P10591	642 aa	Known RBP	7.5	□□□□□ -1.21
SMP1	YBR182C	SLX8	P40072	274 aa		7.5	□□□□□ -1.21
SMP1	YBR182C	FPK1	P53739	893 aa		7.49	□□□□□ -1.21
SMP1	YBR182C	TBF1	Q02457	562 aa		7.49	□□□□□ -1.21
SMP1	YBR182C	PUS5	Q06244	254 aa		7.49	□□□□□ -1.21
SMP1	YBR182C	GEF1	P37020	779 aa		7.48	□□□□□ -1.21
SMP1	YBR182C	YPL062W	Q02781	134 aa		7.48	□□□□□ -1.21
SMP1	YBR182C	NOP8	Q08287	484 aa	Predicted RBP	7.48	□□□□□ -1.21
SMP1	YBR182C	BRL1	P38770	471 aa		7.47	□□□□□ -1.21
SMP1	YBR182C	TFB3	Q03290	321 aa		7.47	□□□□□ -1.21
SMP1	YBR182C	ASH1	P34233	588 aa		7.46	□□□□□ -1.21
SMP1	YBR182C	HXT10	P43581	546 aa		7.45	□□□□□ -1.22
SMP1	YBR182C	PUS6	P53294	404 aa		7.45	□□□□□ -1.22
SMP1	YBR182C	SUB2	Q07478	446 aa	Known RBP	7.45	□□□□□ -1.22
SMP1	YBR182C	MET32	Q12041	191 aa		7.44	□□□□□ -1.22
SMP1	YBR182C	SYH1	Q02875	849 aa	Known RBP	7.43	□□□□□ -1.22
SMP1	YBR182C	ALR1	Q08269	859 aa		7.43	□□□□□ -1.22
SMP1	YBR182C	AFT1	P22149	690 aa		7.42	□□□□□ -1.22
SMP1	YBR182C	KIP2	P28743	706 aa		7.42	□□□□□ -1.22
SMP1	YBR182C	MMP1	Q12372	583 aa		7.42	□□□□□ -1.22
SMP1	YBR182C	SSA2	P10592	639 aa	Known RBP	7.41	□□□□□ -1.22
SMP1	YBR182C	MET22	P32179	357 aa		7.4	□□□□□ -1.22
SMP1	YBR182C	ENV9	Q08651	330 aa		7.4	□□□□□ -1.22
SMP1	YBR182C	TPD3	P31383	635 aa		7.39	□□□□□ -1.23
SMP1	YBR182C	GLN1	P32288	370 aa	Known RBP	7.39	□□□□□ -1.23
SMP1	YBR182C	RRD1	P40454	393 aa	Known RBP	7.39	□□□□□ -1.23
SMP1	YBR182C	HST2	P53686	357 aa		7.39	□□□□□ -1.23
SMP1	YBR182C	PDC1	P06169	563 aa	Known RBP	7.38	□□□□□ -1.23
SMP1	YBR182C	SCJ1	P25303	377 aa		7.38	□□□□□ -1.23
SMP1	YBR182C	RPA14	P50106	137 aa		7.38	□□□□□ -1.23
SMP1	YBR182C	YDL206W	Q12424	762 aa		7.38	□□□□□ -1.23
SMP1	YBR182C	YDR444W	Q04093	687 aa		7.37	□□□□□ -1.23
SMP1	YBR182C	SSA4	P22202	642 aa	Known RBP	7.36	□□□□□ -1.23
SMP1	YBR182C	PKC1	P24583	1151 aa		7.36	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms