RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W IPL1P38991 367 aa6.79□□□□□ -1.32
SIF2YBR103W BBC1P47068 1157 aa6.79□□□□□ -1.32
SIF2YBR103W PDR5P33302 1511 aaKnown RBP6.79□□□□□ -1.32
SIF2YBR103W SSM4P40318 1319 aa6.79□□□□□ -1.32
SIF2YBR103W GCN2P15442 1659 aa6.78□□□□□ -1.32
SIF2YBR103W USO1P25386 1790 aa6.77□□□□□ -1.32
SIF2YBR103W DCD1P06773 312 aa6.77□□□□□ -1.33
SIF2YBR103W MRPL32P25348 183 aa6.77□□□□□ -1.33
SIF2YBR103W EBP2P36049 427 aaKnown RBP6.76□□□□□ -1.33
SIF2YBR103W HGH1P48362 394 aaKnown RBP6.76□□□□□ -1.33
SIF2YBR103W TY1B-NL2Q99337 1749 aaKnown RBP6.76□□□□□ -1.33
SIF2YBR103W DSF2P38213 736 aa6.74□□□□□ -1.33
SIF2YBR103W KIN1P13185 1064 aa6.73□□□□□ -1.33
SIF2YBR103W TYS1P36421 394 aaKnown RBP6.73□□□□□ -1.33
SIF2YBR103W YNR021WP53723 404 aaKnown RBP6.72□□□□□ -1.33
SIF2YBR103W PBS2P08018 668 aa6.72□□□□□ -1.33
SIF2YBR103W PDR11P40550 1411 aa6.7□□□□□ -1.34
SIF2YBR103W MRM1P25270 412 aa6.69□□□□□ -1.34
SIF2YBR103W YMR196WQ04336 1088 aa6.68□□□□□ -1.34
SIF2YBR103W MAK11P20484 414 aaKnown RBP6.67□□□□□ -1.34
SIF2YBR103W BCH2P36122 765 aa6.67□□□□□ -1.34
SIF2YBR103W RCR1P38212 213 aa6.67□□□□□ -1.34
SIF2YBR103W RTG3P38165 486 aa6.65□□□□□ -1.34
SIF2YBR103W AIM7Q12156 149 aa6.65□□□□□ -1.34
SIF2YBR103W GLC3P32775 704 aa6.65□□□□□ -1.35
SIF2YBR103W CDC27P38042 758 aa6.65□□□□□ -1.35
SIF2YBR103W MAM3Q12296 706 aa6.65□□□□□ -1.35
SIF2YBR103W RAV1P47104 1357 aa6.64□□□□□ -1.35
SIF2YBR103W PRY3P47033 881 aa6.64□□□□□ -1.35
SIF2YBR103W EPS1P40557 701 aa6.62□□□□□ -1.35
SIF2YBR103W CFT1Q06632 1357 aaKnown RBP6.62□□□□□ -1.35
SIF2YBR103W THI12P42883 340 aa6.61□□□□□ -1.35
SIF2YBR103W THI5P43534 340 aa6.61□□□□□ -1.35
SIF2YBR103W THI11P47183 340 aa6.61□□□□□ -1.35
SIF2YBR103W THI13Q07748 340 aa6.61□□□□□ -1.35
SIF2YBR103W BCK1Q01389 1478 aa6.61□□□□□ -1.35
SIF2YBR103W IES2P40154 320 aa6.6□□□□□ -1.35
SIF2YBR103W NUP192P47054 1683 aa6.59□□□□□ -1.35
SIF2YBR103W SIS2P36024 562 aa6.59□□□□□ -1.35
SIF2YBR103W RTC1Q08281 1341 aa6.58□□□□□ -1.36
SIF2YBR103W PAF1P38351 445 aa6.58□□□□□ -1.36
SIF2YBR103W NSR1P27476 414 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
SIF2YBR103W COQ8P27697 501 aa6.57□□□□□ -1.36
SIF2YBR103W REF2P42073 533 aaPredicted RBP6.57□□□□□ -1.36
SIF2YBR103W MAK21Q12176 1025 aaKnown RBP6.57□□□□□ -1.36
SIF2YBR103W KRE5P22023 1365 aa6.56□□□□□ -1.36
SIF2YBR103W GUA1P38625 525 aaKnown RBP6.56□□□□□ -1.36
SIF2YBR103W DIT2P21595 489 aa6.54□□□□□ -1.36
SIF2YBR103W BDF1P35817 686 aa6.54□□□□□ -1.36
SIF2YBR103W MRX12P47084 519 aa6.54□□□□□ -1.36
SIF2YBR103W NUP42P49686 430 aaKnown RBP6.54□□□□□ -1.36
SIF2YBR103W ATF2P53296 535 aa6.54□□□□□ -1.36
SIF2YBR103W NOP53Q12080 455 aaKnown RBP6.54□□□□□ -1.36
SIF2YBR103W ALD4P46367 519 aaKnown RBP6.53□□□□□ -1.36
SIF2YBR103W YNR029CP53729 429 aaKnown RBP6.53□□□□□ -1.36
SIF2YBR103W RIA1P53893 1110 aa6.53□□□□□ -1.36
SIF2YBR103W NOP7P53261 605 aaKnown RBP6.51□□□□□ -1.37
SIF2YBR103W HPC2Q01448 625 aa6.51□□□□□ -1.37
SIF2YBR103W AIM44Q99299 758 aa6.51□□□□□ -1.37
SIF2YBR103W RAD9P14737 1309 aa6.51□□□□□ -1.37
SIF2YBR103W YML020WQ03722 664 aa6.5□□□□□ -1.37
SIF2YBR103W CAB1Q04430 367 aa6.5□□□□□ -1.37
SIF2YBR103W VPS29P38759 282 aa6.48□□□□□ -1.37
SIF2YBR103W TFB3Q03290 321 aa6.47□□□□□ -1.37
SIF2YBR103W COX6P00427 148 aa6.47□□□□□ -1.37
SIF2YBR103W SSA1P10591 642 aaKnown RBP6.47□□□□□ -1.37
SIF2YBR103W BRL1P38770 471 aa6.47□□□□□ -1.37
SIF2YBR103W TY3B-IQ7LHG5 1498 aaKnown RBP6.45□□□□□ -1.38
SIF2YBR103W ESL2P36168 1195 aa6.45□□□□□ -1.38
SIF2YBR103W GEF1P37020 779 aa6.44□□□□□ -1.38
SIF2YBR103W SLX8P40072 274 aa6.44□□□□□ -1.38
SIF2YBR103W SCY1P53009 804 aa6.43□□□□□ -1.38
SIF2YBR103W NAP1P25293 417 aaKnown RBP6.43□□□□□ -1.38
SIF2YBR103W EDS1P38073 919 aa6.43□□□□□ -1.38
SIF2YBR103W YMR1P47147 688 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
SIF2YBR103W NOP8Q08287 484 aaPredicted RBP6.43□□□□□ -1.38
SIF2YBR103W SSA2P10592 639 aaKnown RBP6.41□□□□□ -1.38
SIF2YBR103W TAF8Q03750 510 aa6.4□□□□□ -1.38
SIF2YBR103W RRP5Q05022 1729 aaKnown RBP6.4□□□□□ -1.38
SIF2YBR103W SUB2Q07478 446 aaKnown RBP6.4□□□□□ -1.38
SIF2YBR103W TAF5P38129 798 aa6.39□□□□□ -1.39
SIF2YBR103W CPS1P27614 576 aa6.39□□□□□ -1.39
SIF2YBR103W TY4B-HP0C2J7 1802 aa6.38□□□□□ -1.39
SIF2YBR103W TY4B-JP47024 1803 aa6.38□□□□□ -1.39
SIF2YBR103W STS1P38637 319 aa6.38□□□□□ -1.39
SIF2YBR103W YRF1-2P40105 1681 aa6.37□□□□□ -1.39
SIF2YBR103W PKC1P24583 1151 aa6.37□□□□□ -1.39
SIF2YBR103W APP1P53933 587 aa6.37□□□□□ -1.39
SIF2YBR103W PSK1P31374 1356 aa6.37□□□□□ -1.39
SIF2YBR103W MNN4P36044 1178 aa6.36□□□□□ -1.39
SIF2YBR103W DBP1P24784 617 aaKnown RBP6.36□□□□□ -1.39
SIF2YBR103W PTC3P34221 468 aaKnown RBP6.36□□□□□ -1.39
SIF2YBR103W YJL007CP47080 104 aa6.36□□□□□ -1.39
SIF2YBR103W RCM1P53972 490 aa6.36□□□□□ -1.39
SIF2YBR103W ADE6P38972 1358 aaKnown RBP6.35□□□□□ -1.39
SIF2YBR103W SPE2P21182 396 aa6.35□□□□□ -1.39
SIF2YBR103W SSA4P22202 642 aaKnown RBP6.35□□□□□ -1.39
SIF2YBR103W BIM1P40013 344 aa6.35□□□□□ -1.39
SIF2YBR103W CSN12P47130 423 aa6.35□□□□□ -1.39
SIF2YBR103W PPH3P32345 308 aa6.34□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms