RNA–Protein interactions for RNA: YAL062W

GDH3, Transcript of NADP(+)-dependent glutamate dehydrogenase, yeast

Gene GDH3, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDH3	YAL062W	YFR006W	P43590	535 aa		13.9	□□□□□ -0.18
GDH3	YAL062W	CPS1	P27614	576 aa		13.88	□□□□□ -0.19
GDH3	YAL062W	PSK1	P31374	1356 aa		13.88	□□□□□ -0.19
GDH3	YAL062W	PPH3	P32345	308 aa		13.87	□□□□□ -0.19
GDH3	YAL062W	FKH1	P40466	484 aa		13.85	□□□□□ -0.19
GDH3	YAL062W	SPT7	P35177	1332 aa		13.82	□□□□□ -0.2
GDH3	YAL062W	RTG3	P38165	486 aa		13.82	□□□□□ -0.2
GDH3	YAL062W	PSD2	P53037	1138 aa	Known RBP	13.8	□□□□□ -0.2
GDH3	YAL062W	YML133C	Q03099	1374 aa		13.77	□□□□□ -0.2
GDH3	YAL062W	YLL067C	Q07888	1374 aa		13.77	□□□□□ -0.2
GDH3	YAL062W	YLL066C	Q99208	1374 aa		13.77	□□□□□ -0.2
GDH3	YAL062W	LEU2	P04173	364 aa	Predicted RBP	13.77	□□□□□ -0.21
GDH3	YAL062W	MTR4	P47047	1073 aa	Known RBP	13.73	□□□□□ -0.21
GDH3	YAL062W	MLP1	Q02455	1875 aa	Known RBP	13.71	□□□□□ -0.21
GDH3	YAL062W	ENP1	P38333	483 aa	Known RBP	13.71	□□□□□ -0.22
GDH3	YAL062W	PRP43	P53131	767 aa	Known RBP	13.71	□□□□□ -0.22
GDH3	YAL062W	ADE6	P38972	1358 aa	Known RBP	13.7	□□□□□ -0.22
GDH3	YAL062W	NST1	P53935	1240 aa		13.7	□□□□□ -0.22
GDH3	YAL062W	LEU3	P08638	886 aa		13.68	□□□□□ -0.22
GDH3	YAL062W	PTP3	P40048	928 aa		13.68	□□□□□ -0.22
GDH3	YAL062W	TAP42	Q04372	366 aa		13.65	□□□□□ -0.22
GDH3	YAL062W	PDI1	P17967	522 aa	Known RBP	13.64	□□□□□ -0.23
GDH3	YAL062W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	13.64	□□□□□ -0.23	not detected
GDH3	YAL062W	CSE4	P36012	229 aa		13.63	□□□□□ -0.23
GDH3	YAL062W	RPS24A	P0CX31	135 aa	Known RBP	13.61	□□□□□ -0.23
GDH3	YAL062W	RPS24B	P0CX32	135 aa	Known RBP	13.61	□□□□□ -0.23
GDH3	YAL062W	YEF3	P16521	1044 aa	Known RBP	13.61	□□□□□ -0.23
GDH3	YAL062W	RTF1	P53064	558 aa		13.61	□□□□□ -0.23
GDH3	YAL062W	GRX4	P32642	244 aa		13.58	□□□□□ -0.23
GDH3	YAL062W	IOC4	Q04213	475 aa		13.58	□□□□□ -0.23
GDH3	YAL062W	TRK1	P12685	1235 aa		13.57	□□□□□ -0.24
GDH3	YAL062W	PRP5	P21372	849 aa	Predicted RBP	13.55	□□□□□ -0.24
GDH3	YAL062W	PRP45	P28004	379 aa	Predicted RBP	13.55	□□□□□ -0.24
GDH3	YAL062W	HIM1	Q06674	414 aa		13.55	□□□□□ -0.24
GDH3	YAL062W	AUS1	Q08409	1394 aa		13.53	□□□□□ -0.24
GDH3	YAL062W	KAR2	P16474	682 aa	Known RBP	13.53	□□□□□ -0.24
GDH3	YAL062W	GAS4	Q08271	471 aa		13.52	□□□□□ -0.25
GDH3	YAL062W	YAH1	Q12184	172 aa	Known RBP	13.5	□□□□□ -0.25
GDH3	YAL062W	TY4B-H	P0C2J7	1802 aa		13.49	□□□□□ -0.25
GDH3	YAL062W	TY4B-J	P47024	1803 aa		13.49	□□□□□ -0.25
GDH3	YAL062W	DPS1	P04802	557 aa	Known RBP	13.49	□□□□□ -0.25
GDH3	YAL062W	SLM3	Q12093	417 aa		13.47	□□□□□ -0.25
GDH3	YAL062W	ENT1	Q12518	454 aa		13.46	□□□□□ -0.25
GDH3	YAL062W	MSB3	P48566	633 aa	Predicted RBP	13.45	□□□□□ -0.26
GDH3	YAL062W	RRP5	Q05022	1729 aa	Known RBP	13.45	□□□□□ -0.26
GDH3	YAL062W	REB1	P21538	810 aa		13.45	□□□□□ -0.26
GDH3	YAL062W	PAP2	P53632	584 aa	Known RBP	13.44	□□□□□ -0.26
GDH3	YAL062W	PRS1	P32895	427 aa	Known RBP	13.43	□□□□□ -0.26
GDH3	YAL062W	RRP46	P53256	223 aa	Predicted RBP	13.43	□□□□□ -0.26
GDH3	YAL062W	RPO41	P13433	1351 aa	Known RBP	13.42	□□□□□ -0.26
GDH3	YAL062W	TCB1	Q12466	1186 aa		13.42	□□□□□ -0.26
GDH3	YAL062W	RPP0	P05317	312 aa	Known RBP	13.41	□□□□□ -0.26
GDH3	YAL062W	APP1	P53933	587 aa		13.41	□□□□□ -0.26
GDH3	YAL062W	ENV9	Q08651	330 aa		13.39	□□□□□ -0.27
GDH3	YAL062W	YRF1-2	P40105	1681 aa		13.39	□□□□□ -0.27
GDH3	YAL062W	NOP2	P40991	618 aa	Known RBP	13.38	□□□□□ -0.27
GDH3	YAL062W	RTR1	P40084	226 aa	Predicted RBP	13.36	□□□□□ -0.27
GDH3	YAL062W	YDL144C	Q07589	356 aa		13.36	□□□□□ -0.27
GDH3	YAL062W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	13.35	□□□□□ -0.27	not detected
GDH3	YAL062W	VPS27	P40343	622 aa	Known RBP	13.34	□□□□□ -0.27
GDH3	YAL062W	XKS1	P42826	600 aa		13.33	□□□□□ -0.27
GDH3	YAL062W	RSF2	P46974	1380 aa		13.33	□□□□□ -0.28
GDH3	YAL062W	PRD1	P25375	712 aa		13.32	□□□□□ -0.28
GDH3	YAL062W	AKL1	P38080	1108 aa	Known RBP	13.32	□□□□□ -0.28
GDH3	YAL062W	MPP10	P47083	593 aa	Known RBP	13.32	□□□□□ -0.28
GDH3	YAL062W	DSD1	P53095	428 aa		13.32	□□□□□ -0.28
GDH3	YAL062W	YIL177C	P40434	1758 aa		13.32	□□□□□ -0.28
GDH3	YAL062W	YJL225C	P40889	1758 aa		13.32	□□□□□ -0.28
GDH3	YAL062W	CDC45	Q08032	650 aa		13.32	□□□□□ -0.28
GDH3	YAL062W	SNF2	P22082	1703 aa		13.3	□□□□□ -0.28
GDH3	YAL062W	IES2	P40154	320 aa		13.3	□□□□□ -0.28
GDH3	YAL062W	IMH1	Q06704	911 aa	Known RBP	13.3	□□□□□ -0.28
GDH3	YAL062W	RCR1	P38212	213 aa		13.28	□□□□□ -0.28
GDH3	YAL062W	APC1	P53886	1748 aa		13.28	□□□□□ -0.28
GDH3	YAL062W	CTF4	Q01454	927 aa		13.27	□□□□□ -0.29
GDH3	YAL062W	THI22	Q06490	572 aa		13.27	□□□□□ -0.29
GDH3	YAL062W	YRF1-4	O13559	1382 aa		13.27	□□□□□ -0.29
GDH3	YAL062W	URB1	P34241	1764 aa	Known RBP	13.26	□□□□□ -0.29
GDH3	YAL062W	SIR4	P11978	1358 aa		13.25	□□□□□ -0.29
GDH3	YAL062W	FKS3	Q04952	1785 aa		13.25	□□□□□ -0.29
GDH3	YAL062W	SUI2	P20459	304 aa	Known RBP	13.24	□□□□□ -0.29
GDH3	YAL062W	HSP104	P31539	908 aa	Known RBP	13.24	□□□□□ -0.29
GDH3	YAL062W	NTH2	P35172	780 aa		13.24	□□□□□ -0.29
GDH3	YAL062W	SAP155	P43612	1002 aa		13.24	□□□□□ -0.29
GDH3	YAL062W	YIL055C	P40523	627 aa	Known RBP	13.23	□□□□□ -0.29
GDH3	YAL062W	RVB2	Q12464	471 aa	Known RBP	13.23	□□□□□ -0.29
GDH3	YAL062W	YRB30	P53107	440 aa	Predicted RBP	13.22	□□□□□ -0.29
GDH3	YAL062W	YNL050C	P53952	270 aa		13.22	□□□□□ -0.29
GDH3	YAL062W	TPD3	P31383	635 aa		13.2	□□□□□ -0.3
GDH3	YAL062W	MEC3	Q02574	474 aa		13.2	□□□□□ -0.3
GDH3	YAL062W	AOS1	Q06624	347 aa		13.2	□□□□□ -0.3
GDH3	YAL062W	YKL133C	P36066	463 aa		13.2	□□□□□ -0.3
GDH3	YAL062W	HEF3	P53978	1044 aa	Known RBP	13.2	□□□□□ -0.3
GDH3	YAL062W	RTT109	Q07794	436 aa		13.19	□□□□□ -0.3
GDH3	YAL062W	INP54	Q08227	384 aa	Known RBP	13.18	□□□□□ -0.3
GDH3	YAL062W	ROM2	P51862	1356 aa	Known RBP	13.17	□□□□□ -0.3
GDH3	YAL062W	YRF1-3	P0CX14	1859 aa		13.17	□□□□□ -0.3
GDH3	YAL062W	YRF1-7	P0CX15	1859 aa		13.17	□□□□□ -0.3
GDH3	YAL062W	YRF1-6	P53819	1859 aa		13.17	□□□□□ -0.3
GDH3	YAL062W	MAM1	P40065	302 aa		13.15	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms