RNA–Protein interactions for RNA: ENST00000641953.1

CASC19-268, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-268ENST00000641953 SGIP1Q9BQI5 828 aa9.65□□□□□ -0.86
CASC19-268ENST00000641953 ADAMTS12P58397 1594 aa9.65□□□□□ -0.86
CASC19-268ENST00000641953 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.63□□□□□ -0.87
CASC19-268ENST00000641953 CUL7Q14999 1698 aa9.63□□□□□ -0.87
CASC19-268ENST00000641953 GAPVD1Q14C86 1478 aa9.62□□□□□ -0.87
CASC19-268ENST00000641953 MAGI1Q96QZ7 1491 aaPredicted RBP9.62□□□□□ -0.87
CASC19-268ENST00000641953 GRIN2BQ13224 1484 aa9.61□□□□□ -0.87
CASC19-268ENST00000641953 KIF27Q86VH2 1401 aa9.61□□□□□ -0.87
CASC19-268ENST00000641953 EEA1Q15075 1411 aa9.6□□□□□ -0.87
CASC19-268ENST00000641953 HS3ST6Q96QI5 342 aa9.6□□□□□ -0.87
CASC19-268ENST00000641953 PCDHB13Q9Y5F0 798 aa9.6□□□□□ -0.87
CASC19-268ENST00000641953 IRX5P78411 483 aaPredicted RBP9.59□□□□□ -0.87
CASC19-268ENST00000641953 SNAPC4Q5SXM2 1469 aa9.59□□□□□ -0.87
CASC19-268ENST00000641953 RASEFQ8IZ41 740 aa9.58□□□□□ -0.88
CASC19-268ENST00000641953 AQRO60306 1485 aaKnown RBP eCLIP9.58□□□□□ -0.88
CASC19-268ENST00000641953 FAM205CA6NFA0 338 aa9.57□□□□□ -0.88
CASC19-268ENST00000641953 SYNJ2O15056 1496 aa9.56□□□□□ -0.88
CASC19-268ENST00000641953 TDRD9Q8NDG6 1382 aaKnown RBP9.56□□□□□ -0.88
CASC19-268ENST00000641953 POTEB3A0JP26 581 aa9.56□□□□□ -0.88
CASC19-268ENST00000641953 POTEBQ6S5H4 581 aa9.56□□□□□ -0.88
CASC19-268ENST00000641953 TMEM106CQ9BVX2 250 aa9.56□□□□□ -0.88
CASC19-268ENST00000641953 OCEL1Q9H607 264 aa9.56□□□□□ -0.88
CASC19-268ENST00000641953 PLEKHG5O94827 1062 aa9.55□□□□□ -0.88
CASC19-268ENST00000641953 KIF21BO75037 1637 aa9.55□□□□□ -0.88
CASC19-268ENST00000641953 PRXQ9BXM0 1461 aa9.54□□□□□ -0.88
CASC19-268ENST00000641953 CHD1O14646 1710 aa9.54□□□□□ -0.88
CASC19-268ENST00000641953 TRIM41Q8WV44 630 aa9.54□□□□□ -0.88
CASC19-268ENST00000641953 RUSC2Q8N2Y8 1516 aa9.54□□□□□ -0.88
CASC19-268ENST00000641953 FHAD1B1AJZ9 1412 aa9.53□□□□□ -0.88
CASC19-268ENST00000641953 GRIN2AQ12879 1464 aa9.53□□□□□ -0.88
CASC19-268ENST00000641953 RNF166Q96A37 237 aaPredicted RBP9.51□□□□□ -0.89
CASC19-268ENST00000641953 CLASP1Q7Z460 1538 aa9.51□□□□□ -0.89
CASC19-268ENST00000641953 IGF1RP08069 1367 aa9.5□□□□□ -0.89
CASC19-268ENST00000641953 NUP160Q12769 1436 aa9.5□□□□□ -0.89
CASC19-268ENST00000641953 IFNL1Q8IU54 200 aa9.5□□□□□ -0.89
CASC19-268ENST00000641953 CEP170Q5SW79 1584 aa9.5□□□□□ -0.89
CASC19-268ENST00000641953 RAPGEF2Q9Y4G8 1499 aa9.47□□□□□ -0.89
CASC19-268ENST00000641953 SHROOM2Q13796 1616 aa9.46□□□□□ -0.89
CASC19-268ENST00000641953 CTTNBP2Q8WZ74 1663 aa9.46□□□□□ -0.89
CASC19-268ENST00000641953 C3orf67Q6ZVT6 689 aa9.45□□□□□ -0.9
CASC19-268ENST00000641953 GOLGA3Q08378 1498 aa9.43□□□□□ -0.9
CASC19-268ENST00000641953 CARMIL1Q5VZK9 1371 aa9.43□□□□□ -0.9
CASC19-268ENST00000641953 MIER1Q8N108 512 aa9.42□□□□□ -0.9
CASC19-268ENST00000641953 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
CASC19-268ENST00000641953 MYT1LQ9UL68 1186 aa9.4□□□□□ -0.9
CASC19-268ENST00000641953 KIAA0586Q9BVV6 1533 aa9.4□□□□□ -0.91
CASC19-268ENST00000641953 UGGT2Q9NYU1 1516 aa9.39□□□□□ -0.91
CASC19-268ENST00000641953 SAMD9Q5K651 1589 aa9.38□□□□□ -0.91
CASC19-268ENST00000641953 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
CASC19-268ENST00000641953 L3MBTL3Q96JM7 780 aaPredicted RBP9.36□□□□□ -0.91
CASC19-268ENST00000641953 EFCAB5A4FU69 1503 aa9.36□□□□□ -0.91
CASC19-268ENST00000641953 KIAA0556O60303 1618 aa9.35□□□□□ -0.91
CASC19-268ENST00000641953 PROM2Q8N271 834 aa9.35□□□□□ -0.91
CASC19-268ENST00000641953 ARHGEF11O15085 1522 aa9.32□□□□□ -0.92
CASC19-268ENST00000641953 DISP1Q96F81 1524 aa9.32□□□□□ -0.92
CASC19-268ENST00000641953 CHMP7Q8WUX9 453 aaPredicted RBP9.32□□□□□ -0.92
CASC19-268ENST00000641953 PDCD7Q8N8D1 485 aaKnown RBP9.31□□□□□ -0.92
CASC19-268ENST00000641953 ERCC6L2Q5T890 1561 aa9.3□□□□□ -0.92
CASC19-268ENST00000641953 FAM212AQ96EL1 285 aa9.3□□□□□ -0.92
CASC19-268ENST00000641953 ERBB3P21860 1342 aa9.3□□□□□ -0.92
CASC19-268ENST00000641953 TNIKQ9UKE5 1360 aa9.29□□□□□ -0.92
CASC19-268ENST00000641953 NUBP1P53384 320 aa9.29□□□□□ -0.92
CASC19-268ENST00000641953 RIMBP3CA6NJZ7 1639 aa9.28□□□□□ -0.92
CASC19-268ENST00000641953 RIMBP3BA6NNM3 1639 aa9.28□□□□□ -0.92
CASC19-268ENST00000641953 RIMBP3Q9UFD9 1639 aa9.28□□□□□ -0.92
CASC19-268ENST00000641953 ZBTB47Q9UFB7 747 aaPredicted RBP9.28□□□□□ -0.92
CASC19-268ENST00000641953 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.93
CASC19-268ENST00000641953 PTGER2P43116 358 aa9.27□□□□□ -0.93
CASC19-268ENST00000641953 ARHGAP35Q9NRY4 1499 aa9.27□□□□□ -0.93
CASC19-268ENST00000641953 ZNF710Q8N1W2 664 aa9.26□□□□□ -0.93
CASC19-268ENST00000641953 ARAP1Q96P48 1450 aa9.26□□□□□ -0.93
CASC19-268ENST00000641953 PRG4Q92954 1404 aaPredicted RBP9.25□□□□□ -0.93
CASC19-268ENST00000641953 FAM9AQ8IZU1 332 aaPredicted RBP9.25□□□□□ -0.93
CASC19-268ENST00000641953 PLCD3Q8N3E9 789 aa9.25□□□□□ -0.93
CASC19-268ENST00000641953 CEP162Q5TB80 1403 aa9.24□□□□□ -0.93
CASC19-268ENST00000641953 HOXB3P14651 431 aaPredicted RBP9.23□□□□□ -0.93
CASC19-268ENST00000641953 CARMIL2Q6F5E8 1435 aa9.22□□□□□ -0.93
CASC19-268ENST00000641953 ABCA8O94911 1581 aa9.22□□□□□ -0.93
CASC19-268ENST00000641953 GOLGA2Q08379 1002 aa9.21□□□□□ -0.94
CASC19-268ENST00000641953 MKRN3Q13064 507 aaKnown RBP9.21□□□□□ -0.94
CASC19-268ENST00000641953 CLIP1P30622 1438 aa9.21□□□□□ -0.94
CASC19-268ENST00000641953 ABCC2Q92887 1545 aa9.21□□□□□ -0.94
CASC19-268ENST00000641953 PCF11O94913 1555 aaKnown RBP9.2□□□□□ -0.94
CASC19-268ENST00000641953 ADCY10Q96PN6 1610 aa9.2□□□□□ -0.94
CASC19-268ENST00000641953 UHRF1BP1LA0JNW5 1464 aa9.2□□□□□ -0.94
CASC19-268ENST00000641953 VARS2Q5ST30 1063 aaKnown RBP9.19□□□□□ -0.94
CASC19-268ENST00000641953 FHOD3Q2V2M9 1422 aa9.19□□□□□ -0.94
CASC19-268ENST00000641953 RAPGEF6Q8TEU7 1601 aa9.19□□□□□ -0.94
CASC19-268ENST00000641953 DOK7Q18PE1 504 aa9.18□□□□□ -0.94
CASC19-268ENST00000641953 JPH4Q96JJ6 628 aa9.18□□□□□ -0.94
CASC19-268ENST00000641953 FYCO1Q9BQS8 1478 aa9.18□□□□□ -0.94
CASC19-268ENST00000641953 PCDHB8Q9UN66 801 aa9.18□□□□□ -0.94
CASC19-268ENST00000641953 HECW1Q76N89 1606 aa9.17□□□□□ -0.94
CASC19-268ENST00000641953 FMN1Q68DA7 1419 aa9.17□□□□□ -0.94
CASC19-268ENST00000641953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.17□□□□□ -0.94
CASC19-268ENST00000641953 ZNF687Q8N1G0 1237 aa9.16□□□□□ -0.94
CASC19-268ENST00000641953 CFAP43Q8NDM7 1665 aa9.16□□□□□ -0.94
CASC19-268ENST00000641953 NUP153P49790 1475 aaKnown RBP9.15□□□□□ -0.94
CASC19-268ENST00000641953 PLB1Q6P1J6 1458 aa9.15□□□□□ -0.94
CASC19-268ENST00000641953 LRRIQ1Q96JM4 1722 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms