RNA–Protein interactions for RNA: ENST00000641953.1

CASC19-268, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-268ENST00000641953 AEBP2Q6ZN18 517 aaPredicted RBP21.42■■□□□ 1.02
CASC19-268ENST00000641953 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
CASC19-268ENST00000641953 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
CASC19-268ENST00000641953 PHF23Q9BUL5 403 aaPredicted RBP18.1■□□□□ 0.49
CASC19-268ENST00000641953 POTEDQ86YR6 584 aa17.53■□□□□ 0.4
CASC19-268ENST00000641953 FOXD1Q16676 465 aa17.27■□□□□ 0.36
CASC19-268ENST00000641953 MSH5O43196 834 aa16.56■□□□□ 0.24
CASC19-268ENST00000641953 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
CASC19-268ENST00000641953 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
CASC19-268ENST00000641953 ADRA2BP18089 450 aa15.4■□□□□ 0.06
CASC19-268ENST00000641953 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
CASC19-268ENST00000641953 CACNB1Q02641 598 aaPredicted RBP14.71□□□□□ -0.05
CASC19-268ENST00000641953 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
CASC19-268ENST00000641953 MAPK8IP2Q13387 824 aaPredicted RBP14.39□□□□□ -0.11
CASC19-268ENST00000641953 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
CASC19-268ENST00000641953 RNF39Q9H2S5 420 aa14.01□□□□□ -0.17
CASC19-268ENST00000641953 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
CASC19-268ENST00000641953 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
CASC19-268ENST00000641953 NISCHQ9Y2I1 1504 aa13.69□□□□□ -0.22
CASC19-268ENST00000641953 HOXD11P31277 338 aaPredicted RBP13.64□□□□□ -0.23
CASC19-268ENST00000641953 POTEHQ6S545 545 aa13.6□□□□□ -0.23
CASC19-268ENST00000641953 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
CASC19-268ENST00000641953 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
CASC19-268ENST00000641953 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
CASC19-268ENST00000641953 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
CASC19-268ENST00000641953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.32
CASC19-268ENST00000641953 DSG3P32926 999 aa12.84□□□□□ -0.35
CASC19-268ENST00000641953 CAPN15O75808 1086 aa12.74□□□□□ -0.37
CASC19-268ENST00000641953 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
CASC19-268ENST00000641953 U3KPZ7 1027 aaPredicted RBP12.61□□□□□ -0.39
CASC19-268ENST00000641953 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
CASC19-268ENST00000641953 CHRDL2Q6WN34 429 aa12.36□□□□□ -0.43
CASC19-268ENST00000641953 SP7Q8TDD2 431 aaPredicted RBP12.36□□□□□ -0.43
CASC19-268ENST00000641953 ABCB7O75027 752 aa12.34□□□□□ -0.43
CASC19-268ENST00000641953 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
CASC19-268ENST00000641953 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
CASC19-268ENST00000641953 NPM3O75607 178 aaKnown RBP12.31□□□□□ -0.44
CASC19-268ENST00000641953 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
CASC19-268ENST00000641953 APLP2Q06481 763 aa12.28□□□□□ -0.44
CASC19-268ENST00000641953 CCDC180Q9P1Z9 1646 aa12.22□□□□□ -0.45
CASC19-268ENST00000641953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
CASC19-268ENST00000641953 HNRNPUL2Q1KMD3 747 aaKnown RBP12.06□□□□□ -0.48
CASC19-268ENST00000641953 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
CASC19-268ENST00000641953 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
CASC19-268ENST00000641953 HAX1O00165 279 aa11.91□□□□□ -0.5
CASC19-268ENST00000641953 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
CASC19-268ENST00000641953 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
CASC19-268ENST00000641953 POLA2Q14181 598 aa11.8□□□□□ -0.52
CASC19-268ENST00000641953 REM2Q8IYK8 340 aaPredicted RBP11.71□□□□□ -0.53
CASC19-268ENST00000641953 FXR2P51116 673 aaKnown RBP eCLIP11.66□□□□□ -0.54
CASC19-268ENST00000641953 EVX2Q03828 476 aa11.62□□□□□ -0.55
CASC19-268ENST00000641953 PITPNM1O00562 1244 aa11.58□□□□□ -0.56
CASC19-268ENST00000641953 LHX8Q68G74 356 aa11.58□□□□□ -0.56
CASC19-268ENST00000641953 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
CASC19-268ENST00000641953 ZBTB12Q9Y330 459 aaPredicted RBP11.55□□□□□ -0.56
CASC19-268ENST00000641953 ABCC9O60706 1549 aa11.54□□□□□ -0.56
CASC19-268ENST00000641953 ZCCHC6Q5VYS8 1495 aaKnown RBP11.53□□□□□ -0.56
CASC19-268ENST00000641953 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
CASC19-268ENST00000641953 MYO15BQ96JP2 1530 aa11.45□□□□□ -0.58
CASC19-268ENST00000641953 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
CASC19-268ENST00000641953 MYCNP04198 464 aaPredicted RBP11.44□□□□□ -0.58
CASC19-268ENST00000641953 GABBR2O75899 941 aa11.36□□□□□ -0.59
CASC19-268ENST00000641953 NACADO15069 1562 aa11.36□□□□□ -0.59
CASC19-268ENST00000641953 KCNA4P22459 653 aa11.33□□□□□ -0.6
CASC19-268ENST00000641953 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
CASC19-268ENST00000641953 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
CASC19-268ENST00000641953 RB1CC1Q8TDY2 1594 aa11.29□□□□□ -0.6
CASC19-268ENST00000641953 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
CASC19-268ENST00000641953 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
CASC19-268ENST00000641953 SPDYE1Q8NFV5 336 aaPredicted RBP11.12□□□□□ -0.63
CASC19-268ENST00000641953 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
CASC19-268ENST00000641953 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
CASC19-268ENST00000641953 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
CASC19-268ENST00000641953 POTEIP0CG38 1075 aa11.08□□□□□ -0.64
CASC19-268ENST00000641953 UNC13AQ9UPW8 1703 aa11.08□□□□□ -0.64
CASC19-268ENST00000641953 SCRIBQ14160 1630 aa11.02□□□□□ -0.64
CASC19-268ENST00000641953 SHROOM4Q9ULL8 1493 aa11□□□□□ -0.65
CASC19-268ENST00000641953 BICRAQ9NZM4 1560 aa10.99□□□□□ -0.65
CASC19-268ENST00000641953 CLCN6P51797 869 aa10.97□□□□□ -0.65
CASC19-268ENST00000641953 CHADLQ6NUI6 762 aa10.96□□□□□ -0.65
CASC19-268ENST00000641953 POTEMA6NI47 508 aa10.95□□□□□ -0.66
CASC19-268ENST00000641953 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
CASC19-268ENST00000641953 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
CASC19-268ENST00000641953 FBLN2P98095 1184 aa10.9□□□□□ -0.66
CASC19-268ENST00000641953 CD44P16070 742 aaKnown RBP10.89□□□□□ -0.67
CASC19-268ENST00000641953 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
CASC19-268ENST00000641953 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
CASC19-268ENST00000641953 PCDH10Q9P2E7 1040 aa10.86□□□□□ -0.67
CASC19-268ENST00000641953 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
CASC19-268ENST00000641953 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
CASC19-268ENST00000641953 ZNF692Q9BU19 519 aaPredicted RBP10.83□□□□□ -0.68
CASC19-268ENST00000641953 SSUH2Q9Y2M2 353 aa10.82□□□□□ -0.68
CASC19-268ENST00000641953 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
CASC19-268ENST00000641953 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
CASC19-268ENST00000641953 ZNF579Q8NAF0 562 aaKnown RBP10.68□□□□□ -0.7
CASC19-268ENST00000641953 PABPN1Q86U42 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
CASC19-268ENST00000641953 EIF4G1Q04637 1599 aaKnown RBP10.66□□□□□ -0.7
CASC19-268ENST00000641953 ATXN8OSP0DMR3 200 aa10.64□□□□□ -0.71
CASC19-268ENST00000641953 MKRN4PQ13434 485 aaPredicted RBP10.63□□□□□ -0.71
CASC19-268ENST00000641953 SMARCA4P51532 1647 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 928 ms