RNA–Protein interactions for RNA: ENST00000640632.1

KCNMA1-287, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2 BASIC

Gene KCNMA1, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-287ENST00000640632 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
KCNMA1-287ENST00000640632 POGKQ9P215 609 aa17.15■□□□□ 0.34
KCNMA1-287ENST00000640632 CCDC7Q96M83 1385 aa17.15■□□□□ 0.34
KCNMA1-287ENST00000640632 TIAM1Q13009 1591 aa17.13■□□□□ 0.33
KCNMA1-287ENST00000640632 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
KCNMA1-287ENST00000640632 NCOA1Q15788 1441 aa17.11■□□□□ 0.33
KCNMA1-287ENST00000640632 SENP3-EIF4A1A0A087X0R7 540 aa17.11■□□□□ 0.33
KCNMA1-287ENST00000640632 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
KCNMA1-287ENST00000640632 SKAP1Q86WV1 359 aa17.1■□□□□ 0.33
KCNMA1-287ENST00000640632 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
KCNMA1-287ENST00000640632 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
KCNMA1-287ENST00000640632 PRDM4Q9UKN5 801 aa17.09■□□□□ 0.33
KCNMA1-287ENST00000640632 RAD54L2Q9Y4B4 1467 aa17.09■□□□□ 0.33
KCNMA1-287ENST00000640632 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
KCNMA1-287ENST00000640632 CALD1Q05682 793 aaKnown RBP17.08■□□□□ 0.33
KCNMA1-287ENST00000640632 LRRC9Q6ZRR7 1453 aa17.08■□□□□ 0.32
KCNMA1-287ENST00000640632 CENPJQ9HC77 1338 aaPredicted RBP17.08■□□□□ 0.32
KCNMA1-287ENST00000640632 PDCL3Q9H2J4 239 aa17.06■□□□□ 0.32
KCNMA1-287ENST00000640632 UACAQ9BZF9 1416 aa17.06■□□□□ 0.32
KCNMA1-287ENST00000640632 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
KCNMA1-287ENST00000640632 PDE4CQ08493 712 aa17.05■□□□□ 0.32
KCNMA1-287ENST00000640632 CCDC18Q5T9S5 1454 aa17.04■□□□□ 0.32
KCNMA1-287ENST00000640632 RCAN3Q9UKA8 241 aa17.04■□□□□ 0.32
KCNMA1-287ENST00000640632 IGF1RP08069 1367 aa17.03■□□□□ 0.32
KCNMA1-287ENST00000640632 XRCC6P12956 609 aaKnown RBP eCLIP17.03■□□□□ 0.32
KCNMA1-287ENST00000640632 RGS3P49796 1198 aa17.02■□□□□ 0.31
KCNMA1-287ENST00000640632 ARID3CA6NKF2 412 aa17.01■□□□□ 0.31
KCNMA1-287ENST00000640632 ARXQ96QS3 562 aa17.01■□□□□ 0.31
KCNMA1-287ENST00000640632 FANCD2Q9BXW9 1451 aa17■□□□□ 0.31
KCNMA1-287ENST00000640632 ARID4BQ4LE39 1312 aaPredicted RBP17■□□□□ 0.31
KCNMA1-287ENST00000640632 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
KCNMA1-287ENST00000640632 FAM161AQ3B820 660 aa16.99■□□□□ 0.31
KCNMA1-287ENST00000640632 TPM2P07951 284 aa16.98■□□□□ 0.31
KCNMA1-287ENST00000640632 CNGB1Q14028 1251 aaPredicted RBP16.98■□□□□ 0.31
KCNMA1-287ENST00000640632 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
KCNMA1-287ENST00000640632 PANK2Q9BZ23 570 aa16.98■□□□□ 0.31
KCNMA1-287ENST00000640632 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
KCNMA1-287ENST00000640632 GOLGA6L3A6NEY3 463 aa16.97■□□□□ 0.31
KCNMA1-287ENST00000640632 C8orf34Q49A92 452 aa16.97■□□□□ 0.31
KCNMA1-287ENST00000640632 TDRD9Q8NDG6 1382 aaKnown RBP16.97■□□□□ 0.31
KCNMA1-287ENST00000640632 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
KCNMA1-287ENST00000640632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.96■□□□□ 0.31
KCNMA1-287ENST00000640632 FSD2A1L4K1 749 aa16.95■□□□□ 0.3
KCNMA1-287ENST00000640632 DHX29Q7Z478 1369 aaKnown RBP16.94■□□□□ 0.3
KCNMA1-287ENST00000640632 ESPNB1AK53 854 aa16.93■□□□□ 0.3
KCNMA1-287ENST00000640632 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
KCNMA1-287ENST00000640632 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.3
KCNMA1-287ENST00000640632 KTN1Q86UP2 1357 aaKnown RBP16.92■□□□□ 0.3
KCNMA1-287ENST00000640632 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
KCNMA1-287ENST00000640632 CRBNQ96SW2 442 aa16.91■□□□□ 0.3
KCNMA1-287ENST00000640632 PTPN23Q9H3S7 1636 aa16.9■□□□□ 0.3
KCNMA1-287ENST00000640632 POLR1AO95602 1720 aaPredicted RBP16.9■□□□□ 0.3
KCNMA1-287ENST00000640632 ERBB4Q15303 1308 aa16.89■□□□□ 0.3
KCNMA1-287ENST00000640632 PLIN1O60240 522 aa16.89■□□□□ 0.29
KCNMA1-287ENST00000640632 KDM2BQ8NHM5 1336 aa16.89■□□□□ 0.29
KCNMA1-287ENST00000640632 SLKQ9H2G2 1235 aaPredicted RBP16.87■□□□□ 0.29
KCNMA1-287ENST00000640632 LRPPRCP42704 1394 aaKnown RBP16.87■□□□□ 0.29
KCNMA1-287ENST00000640632 FHOD3Q2V2M9 1422 aa16.87■□□□□ 0.29
KCNMA1-287ENST00000640632 CFAP43Q8NDM7 1665 aa16.86■□□□□ 0.29
KCNMA1-287ENST00000640632 L3MBTL2Q969R5 705 aa16.86■□□□□ 0.29
KCNMA1-287ENST00000640632 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
KCNMA1-287ENST00000640632 CENPQQ7L2Z9 268 aaPredicted RBP16.85■□□□□ 0.29
KCNMA1-287ENST00000640632 BCL11BQ9C0K0 894 aaPredicted RBP16.85■□□□□ 0.29
KCNMA1-287ENST00000640632 SPATA31E1Q6ZUB1 1445 aa16.85■□□□□ 0.29
KCNMA1-287ENST00000640632 MYH16Q9H6N6 1097 aa16.85■□□□□ 0.29
KCNMA1-287ENST00000640632 MRE11P49959 708 aa16.84■□□□□ 0.29
KCNMA1-287ENST00000640632 NAIPQ13075 1403 aa16.84■□□□□ 0.29
KCNMA1-287ENST00000640632 PTPRKQ15262 1439 aa16.84■□□□□ 0.29
KCNMA1-287ENST00000640632 PDIA4P13667 645 aaKnown RBP16.84■□□□□ 0.29
KCNMA1-287ENST00000640632 GZF1Q9H116 711 aaPredicted RBP16.84■□□□□ 0.29
KCNMA1-287ENST00000640632 FMN1Q68DA7 1419 aa16.84■□□□□ 0.29
KCNMA1-287ENST00000640632 PDE3BQ13370 1112 aa16.83■□□□□ 0.29
KCNMA1-287ENST00000640632 KIAA1211Q6ZU35 1233 aa16.83■□□□□ 0.28
KCNMA1-287ENST00000640632 TOPBP1Q92547 1522 aa16.83■□□□□ 0.28
KCNMA1-287ENST00000640632 BECN1Q14457 450 aa16.83■□□□□ 0.28
KCNMA1-287ENST00000640632 MYOM3Q5VTT5 1437 aa16.82■□□□□ 0.28
KCNMA1-287ENST00000640632 ANTXR1Q9H6X2 564 aa16.81■□□□□ 0.28
KCNMA1-287ENST00000640632 NBPF8Q3BBV2 869 aa16.8■□□□□ 0.28
KCNMA1-287ENST00000640632 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
KCNMA1-287ENST00000640632 TRIM44Q96DX7 344 aaPredicted RBP16.79■□□□□ 0.28
KCNMA1-287ENST00000640632 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
KCNMA1-287ENST00000640632 USP19O94966 1318 aa16.79■□□□□ 0.28
KCNMA1-287ENST00000640632 SMAP1Q8IYB5 467 aaPredicted RBP16.78■□□□□ 0.28
KCNMA1-287ENST00000640632 CDCA7LQ96GN5 454 aa16.78■□□□□ 0.28
KCNMA1-287ENST00000640632 MAP7D2Q96T17 732 aa16.78■□□□□ 0.28
KCNMA1-287ENST00000640632 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
KCNMA1-287ENST00000640632 GRPEL1Q9HAV7 217 aa16.78■□□□□ 0.28
KCNMA1-287ENST00000640632 DENND4BO75064 1496 aaPredicted RBP16.77■□□□□ 0.27
KCNMA1-287ENST00000640632 RIPK4P57078 832 aa16.76■□□□□ 0.27
KCNMA1-287ENST00000640632 C20orf194Q5TEA3 1177 aa16.76■□□□□ 0.27
KCNMA1-287ENST00000640632 MCM4P33991 863 aa16.76■□□□□ 0.27
KCNMA1-287ENST00000640632 BBXQ8WY36 941 aaPredicted RBP16.76■□□□□ 0.27
KCNMA1-287ENST00000640632 PCF11O94913 1555 aaKnown RBP16.76■□□□□ 0.27
KCNMA1-287ENST00000640632 BRD4O60885 1362 aaPredicted RBP16.75■□□□□ 0.27
KCNMA1-287ENST00000640632 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
KCNMA1-287ENST00000640632 ZHX1Q9UKY1 873 aaPredicted RBP16.74■□□□□ 0.27
KCNMA1-287ENST00000640632 TRAK2O60296 914 aa16.73■□□□□ 0.27
KCNMA1-287ENST00000640632 FAM13BQ9NYF5 915 aa16.73■□□□□ 0.27
KCNMA1-287ENST00000640632 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
KCNMA1-287ENST00000640632 HECW1Q76N89 1606 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms