RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 PRKRIP1Q9H875 184 aaPredicted RBP11.3□□□□□ -0.6
HNRNPU-219ENST00000639628 KTN1Q86UP2 1357 aaKnown RBP11.3□□□□□ -0.6
HNRNPU-219ENST00000639628 CC2D1BQ5T0F9 858 aaKnown RBP11.3□□□□□ -0.6
HNRNPU-219ENST00000639628 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
HNRNPU-219ENST00000639628 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
HNRNPU-219ENST00000639628 RSPH4AQ5TD94 716 aa11.3□□□□□ -0.6
HNRNPU-219ENST00000639628 POLA1P09884 1462 aaPredicted RBP11.29□□□□□ -0.6
HNRNPU-219ENST00000639628 JPH4Q96JJ6 628 aa11.28□□□□□ -0.6
HNRNPU-219ENST00000639628 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
HNRNPU-219ENST00000639628 NUDCQ9Y266 331 aa11.28□□□□□ -0.6
HNRNPU-219ENST00000639628 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
HNRNPU-219ENST00000639628 HFM1A2PYH4 1435 aa11.27□□□□□ -0.6
HNRNPU-219ENST00000639628 EHBP1L1Q8N3D4 1523 aa11.26□□□□□ -0.61
HNRNPU-219ENST00000639628 ZBED9Q6R2W3 1325 aa11.26□□□□□ -0.61
HNRNPU-219ENST00000639628 CFAP53Q96M91 514 aa11.25□□□□□ -0.61
HNRNPU-219ENST00000639628 ABCA10Q8WWZ4 1543 aa11.25□□□□□ -0.61
HNRNPU-219ENST00000639628 KANK1Q14678 1352 aa11.25□□□□□ -0.61
HNRNPU-219ENST00000639628 CC2D2AQ9P2K1 1620 aa11.25□□□□□ -0.61
HNRNPU-219ENST00000639628 ESF1Q9H501 851 aaKnown RBP11.24□□□□□ -0.61
HNRNPU-219ENST00000639628 AQRO60306 1485 aaKnown RBP eCLIP11.24□□□□□ -0.611e-7■■■■□ 25.3
HNRNPU-219ENST00000639628 HNRNPMP52272 730 aaKnown RBP eCLIP11.24□□□□□ -0.61
HNRNPU-219ENST00000639628 NESP48681 1621 aa11.24□□□□□ -0.61
HNRNPU-219ENST00000639628 KIF15Q9NS87 1388 aa11.23□□□□□ -0.61
HNRNPU-219ENST00000639628 USP47Q96K76 1375 aa11.23□□□□□ -0.61
HNRNPU-219ENST00000639628 CCDC7Q96M83 1385 aa11.23□□□□□ -0.61
HNRNPU-219ENST00000639628 NLRP13Q86W25 1043 aa11.23□□□□□ -0.61
HNRNPU-219ENST00000639628 CNTLNQ9NXG0 1405 aa11.23□□□□□ -0.61
HNRNPU-219ENST00000639628 PPM1GO15355 546 aaPredicted RBP11.23□□□□□ -0.61
HNRNPU-219ENST00000639628 PCF11O94913 1555 aaKnown RBP11.23□□□□□ -0.61
HNRNPU-219ENST00000639628 RCAN3Q9UKA8 241 aa11.23□□□□□ -0.61
HNRNPU-219ENST00000639628 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
HNRNPU-219ENST00000639628 EFCAB2Q5VUJ9 269 aa11.22□□□□□ -0.61
HNRNPU-219ENST00000639628 MIA2Q96PC5 1412 aa11.22□□□□□ -0.61
HNRNPU-219ENST00000639628 GRIN2BQ13224 1484 aa11.21□□□□□ -0.61
HNRNPU-219ENST00000639628 PDE3BQ13370 1112 aa11.21□□□□□ -0.62
HNRNPU-219ENST00000639628 WASHC2AQ641Q2 1341 aa11.21□□□□□ -0.62
HNRNPU-219ENST00000639628 BCL11AQ9H165 835 aa11.21□□□□□ -0.62
HNRNPU-219ENST00000639628 MYBBP1AQ9BQG0 1328 aaKnown RBP11.2□□□□□ -0.62
HNRNPU-219ENST00000639628 ARID4BQ4LE39 1312 aaPredicted RBP11.2□□□□□ -0.62
HNRNPU-219ENST00000639628 ST20-MTHFSA0A0A6YYL1 179 aa11.2□□□□□ -0.62
HNRNPU-219ENST00000639628 CUL7Q14999 1698 aa11.2□□□□□ -0.62
HNRNPU-219ENST00000639628 BECN1Q14457 450 aa11.2□□□□□ -0.62
HNRNPU-219ENST00000639628 ZNF644Q9H582 1327 aaPredicted RBP11.2□□□□□ -0.62
HNRNPU-219ENST00000639628 SUPT6HQ7KZ85 1726 aaKnown RBP11.19□□□□□ -0.62
HNRNPU-219ENST00000639628 CCDC144AA2RUR9 1427 aa11.19□□□□□ -0.62
HNRNPU-219ENST00000639628 HSP90AA1P07900 732 aaKnown RBP11.19□□□□□ -0.62
HNRNPU-219ENST00000639628 KIF7Q2M1P5 1343 aa11.19□□□□□ -0.62
HNRNPU-219ENST00000639628 HECW1Q76N89 1606 aa11.18□□□□□ -0.62
HNRNPU-219ENST00000639628 NAIPQ13075 1403 aa11.18□□□□□ -0.62
HNRNPU-219ENST00000639628 TCERG1O14776 1098 aaKnown RBP11.17□□□□□ -0.62
HNRNPU-219ENST00000639628 PRDM2Q13029 1718 aa11.17□□□□□ -0.62
HNRNPU-219ENST00000639628 PTPRGP23470 1445 aa11.16□□□□□ -0.62
HNRNPU-219ENST00000639628 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
HNRNPU-219ENST00000639628 ANKRD50Q9ULJ7 1429 aa11.15□□□□□ -0.62
HNRNPU-219ENST00000639628 RGS3P49796 1198 aa11.15□□□□□ -0.62
HNRNPU-219ENST00000639628 EIF3AQ14152 1382 aaKnown RBP11.15□□□□□ -0.62
HNRNPU-219ENST00000639628 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
HNRNPU-219ENST00000639628 LAMC3Q9Y6N6 1575 aa11.13□□□□□ -0.63
HNRNPU-219ENST00000639628 FANCIQ9NVI1 1328 aa11.13□□□□□ -0.63
HNRNPU-219ENST00000639628 LAS1LQ9Y4W2 734 aaKnown RBP11.13□□□□□ -0.63
HNRNPU-219ENST00000639628 MAPK8IP3Q9UPT6 1336 aa11.13□□□□□ -0.63
HNRNPU-219ENST00000639628 MYH16Q9H6N6 1097 aa11.13□□□□□ -0.63
HNRNPU-219ENST00000639628 MRC2Q9UBG0 1479 aa11.13□□□□□ -0.63
HNRNPU-219ENST00000639628 SPAG9O60271 1321 aaKnown RBP11.12□□□□□ -0.63
HNRNPU-219ENST00000639628 FRAT1Q92837 279 aaPredicted RBP11.12□□□□□ -0.63
HNRNPU-219ENST00000639628 MS4A1P11836 297 aa11.12□□□□□ -0.63
HNRNPU-219ENST00000639628 EPRSP07814 1512 aaKnown RBP11.12□□□□□ -0.63
HNRNPU-219ENST00000639628 TNNT2P45379 298 aaPredicted RBP11.12□□□□□ -0.63
HNRNPU-219ENST00000639628 MORC1Q86VD1 984 aa11.12□□□□□ -0.63
HNRNPU-219ENST00000639628 IFT140Q96RY7 1462 aa11.11□□□□□ -0.63
HNRNPU-219ENST00000639628 ANP32BQ92688 251 aaKnown RBP11.11□□□□□ -0.63
HNRNPU-219ENST00000639628 IPO9Q96P70 1041 aaKnown RBP11.11□□□□□ -0.63
HNRNPU-219ENST00000639628 DAPK1P53355 1430 aa11.11□□□□□ -0.63
HNRNPU-219ENST00000639628 ROCK1Q13464 1354 aa11.1□□□□□ -0.63
HNRNPU-219ENST00000639628 TROQ12816 1431 aaPredicted RBP11.1□□□□□ -0.63
HNRNPU-219ENST00000639628 PANK3Q9H999 370 aa11.1□□□□□ -0.63
HNRNPU-219ENST00000639628 GOLGA2Q08379 1002 aa11.1□□□□□ -0.63
HNRNPU-219ENST00000639628 PTPN23Q9H3S7 1636 aa11.09□□□□□ -0.63
HNRNPU-219ENST00000639628 KIAA1107Q9UPP5 1409 aa11.09□□□□□ -0.63
HNRNPU-219ENST00000639628 MAPKBP1O60336 1514 aa11.09□□□□□ -0.63
HNRNPU-219ENST00000639628 NBPF8Q3BBV2 869 aa11.09□□□□□ -0.63
HNRNPU-219ENST00000639628 POGKQ9P215 609 aa11.09□□□□□ -0.63
HNRNPU-219ENST00000639628 KIF3BO15066 747 aa11.09□□□□□ -0.63
HNRNPU-219ENST00000639628 DEKP35659 375 aaKnown RBP11.09□□□□□ -0.63
HNRNPU-219ENST00000639628 IQGAP2Q13576 1575 aa11.09□□□□□ -0.63
HNRNPU-219ENST00000639628 RRP1P56182 461 aaKnown RBP11.08□□□□□ -0.63
HNRNPU-219ENST00000639628 PNNQ9H307 717 aaKnown RBP11.08□□□□□ -0.64
HNRNPU-219ENST00000639628 SENP3Q9H4L4 574 aaPredicted RBP11.08□□□□□ -0.64
HNRNPU-219ENST00000639628 KIAA0586Q9BVV6 1533 aa11.07□□□□□ -0.64
HNRNPU-219ENST00000639628 CDK13Q14004 1512 aaKnown RBP11.07□□□□□ -0.64
HNRNPU-219ENST00000639628 BRD4O60885 1362 aaPredicted RBP11.06□□□□□ -0.64
HNRNPU-219ENST00000639628 U2SURPO15042 1029 aaKnown RBP11.06□□□□□ -0.64
HNRNPU-219ENST00000639628 GGT6Q6P531 493 aa11.06□□□□□ -0.64
HNRNPU-219ENST00000639628 PRG4Q92954 1404 aaPredicted RBP11.06□□□□□ -0.64
HNRNPU-219ENST00000639628 CHMP4BQ9H444 224 aaKnown RBP11.06□□□□□ -0.64
HNRNPU-219ENST00000639628 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
HNRNPU-219ENST00000639628 URB2Q14146 1524 aaKnown RBP11.04□□□□□ -0.64
HNRNPU-219ENST00000639628 EIF5BO60841 1220 aaKnown RBP11.04□□□□□ -0.64
HNRNPU-219ENST00000639628 SYNJ2O15056 1496 aa11.04□□□□□ -0.64
HNRNPU-219ENST00000639628 THOC2Q8NI27 1593 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms