RNA–Protein interactions for RNA: ENST00000623115.3

ERCC6-210, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2

Gene ERCC6, Length 2,932 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-210ENST00000623115 TOPBP1Q92547 1522 aa12.9□□□□□ -0.34
ERCC6-210ENST00000623115 CNTLNQ9NXG0 1405 aa12.9□□□□□ -0.34
ERCC6-210ENST00000623115 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.34
ERCC6-210ENST00000623115 SNAPC4Q5SXM2 1469 aa12.9□□□□□ -0.34
ERCC6-210ENST00000623115 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
ERCC6-210ENST00000623115 NCOA2Q15596 1464 aa12.89□□□□□ -0.35
ERCC6-210ENST00000623115 MYOM3Q5VTT5 1437 aa12.89□□□□□ -0.35
ERCC6-210ENST00000623115 PTPN23Q9H3S7 1636 aa12.89□□□□□ -0.35
ERCC6-210ENST00000623115 ERICH6BQ5W0A0 696 aa12.89□□□□□ -0.35
ERCC6-210ENST00000623115 CCDC7Q96M83 1385 aa12.88□□□□□ -0.35
ERCC6-210ENST00000623115 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
ERCC6-210ENST00000623115 EIF5BO60841 1220 aaKnown RBP12.88□□□□□ -0.35
ERCC6-210ENST00000623115 TDRD9Q8NDG6 1382 aaKnown RBP12.87□□□□□ -0.35
ERCC6-210ENST00000623115 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
ERCC6-210ENST00000623115 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
ERCC6-210ENST00000623115 EXOC6Q8TAG9 804 aa12.87□□□□□ -0.35
ERCC6-210ENST00000623115 KDM5BQ9UGL1 1544 aa12.86□□□□□ -0.35
ERCC6-210ENST00000623115 CUL7Q14999 1698 aa12.86□□□□□ -0.35
ERCC6-210ENST00000623115 NUDCQ9Y266 331 aa12.85□□□□□ -0.35
ERCC6-210ENST00000623115 CTTNBP2Q8WZ74 1663 aa12.85□□□□□ -0.35
ERCC6-210ENST00000623115 NESP48681 1621 aa12.85□□□□□ -0.35
ERCC6-210ENST00000623115 MPHOSPH9Q99550 1183 aa12.85□□□□□ -0.35
ERCC6-210ENST00000623115 PLIN1O60240 522 aa12.83□□□□□ -0.36
ERCC6-210ENST00000623115 GRIN2BQ13224 1484 aa12.83□□□□□ -0.36
ERCC6-210ENST00000623115 TMC1Q8TDI8 760 aa12.81□□□□□ -0.36
ERCC6-210ENST00000623115 PDE4AP27815 886 aa12.8□□□□□ -0.36
ERCC6-210ENST00000623115 SUPT6HQ7KZ85 1726 aaKnown RBP12.8□□□□□ -0.36
ERCC6-210ENST00000623115 DENND4BO75064 1496 aaPredicted RBP12.78□□□□□ -0.36
ERCC6-210ENST00000623115 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
ERCC6-210ENST00000623115 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
ERCC6-210ENST00000623115 SAMD9Q5K651 1589 aa12.78□□□□□ -0.36
ERCC6-210ENST00000623115 KDM6BO15054 1643 aa12.78□□□□□ -0.36
ERCC6-210ENST00000623115 NCOA1Q15788 1441 aa12.78□□□□□ -0.36
ERCC6-210ENST00000623115 UGGT2Q9NYU1 1516 aa12.77□□□□□ -0.36
ERCC6-210ENST00000623115 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.36
ERCC6-210ENST00000623115 LRRIQ1Q96JM4 1722 aa12.77□□□□□ -0.36
ERCC6-210ENST00000623115 URB2Q14146 1524 aaKnown RBP12.76□□□□□ -0.37
ERCC6-210ENST00000623115 CDCA7LQ96GN5 454 aa12.76□□□□□ -0.37
ERCC6-210ENST00000623115 MAGI3Q5TCQ9 1506 aa12.75□□□□□ -0.37
ERCC6-210ENST00000623115 SMG6Q86US8 1419 aaKnown RBP12.75□□□□□ -0.37
ERCC6-210ENST00000623115 THOC2Q8NI27 1593 aaKnown RBP12.75□□□□□ -0.37
ERCC6-210ENST00000623115 KDM2AQ9Y2K7 1162 aa12.75□□□□□ -0.37
ERCC6-210ENST00000623115 ZNF644Q9H582 1327 aaPredicted RBP12.74□□□□□ -0.37
ERCC6-210ENST00000623115 ARHGEF11O15085 1522 aa12.74□□□□□ -0.37
ERCC6-210ENST00000623115 TCOF1Q13428 1488 aaKnown RBP12.74□□□□□ -0.37
ERCC6-210ENST00000623115 ARXQ96QS3 562 aa12.73□□□□□ -0.37
ERCC6-210ENST00000623115 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
ERCC6-210ENST00000623115 PNISRQ8TF01 805 aaKnown RBP12.72□□□□□ -0.37
ERCC6-210ENST00000623115 BACH2Q9BYV9 841 aa12.71□□□□□ -0.38
ERCC6-210ENST00000623115 RCAN3Q9UKA8 241 aa12.71□□□□□ -0.38
ERCC6-210ENST00000623115 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
ERCC6-210ENST00000623115 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
ERCC6-210ENST00000623115 FRAT1Q92837 279 aaPredicted RBP12.7□□□□□ -0.38
ERCC6-210ENST00000623115 ANKRD30BQ9BXX2 1392 aa12.7□□□□□ -0.38
ERCC6-210ENST00000623115 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
ERCC6-210ENST00000623115 EPRSP07814 1512 aaKnown RBP12.69□□□□□ -0.38
ERCC6-210ENST00000623115 DHX29Q7Z478 1369 aaKnown RBP12.69□□□□□ -0.38
ERCC6-210ENST00000623115 NFKBIBQ15653 356 aa12.68□□□□□ -0.38
ERCC6-210ENST00000623115 RNF123Q5XPI4 1314 aa12.68□□□□□ -0.38
ERCC6-210ENST00000623115 GCC2Q8IWJ2 1684 aa12.68□□□□□ -0.38
ERCC6-210ENST00000623115 ZNF777Q9ULD5 760 aaPredicted RBP12.68□□□□□ -0.38
ERCC6-210ENST00000623115 C20orf194Q5TEA3 1177 aa12.67□□□□□ -0.38
ERCC6-210ENST00000623115 CDK13Q14004 1512 aaKnown RBP12.66□□□□□ -0.38
ERCC6-210ENST00000623115 PDS5BQ9NTI5 1447 aa12.66□□□□□ -0.38
ERCC6-210ENST00000623115 USP47Q96K76 1375 aa12.66□□□□□ -0.38
ERCC6-210ENST00000623115 RPRD2Q5VT52 1461 aaKnown RBP12.66□□□□□ -0.38
ERCC6-210ENST00000623115 GSE1Q14687 1217 aa12.66□□□□□ -0.38
ERCC6-210ENST00000623115 CRBNQ96SW2 442 aa12.66□□□□□ -0.38
ERCC6-210ENST00000623115 LAMC3Q9Y6N6 1575 aa12.66□□□□□ -0.38
ERCC6-210ENST00000623115 TCERG1O14776 1098 aaKnown RBP12.65□□□□□ -0.38
ERCC6-210ENST00000623115 RGS3P49796 1198 aa12.65□□□□□ -0.38
ERCC6-210ENST00000623115 CC2D1BQ5T0F9 858 aaKnown RBP12.64□□□□□ -0.39
ERCC6-210ENST00000623115 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
ERCC6-210ENST00000623115 FRAT2O75474 233 aaPredicted RBP12.64□□□□□ -0.39
ERCC6-210ENST00000623115 SPATA31E1Q6ZUB1 1445 aa12.64□□□□□ -0.39
ERCC6-210ENST00000623115 ROCK1Q13464 1354 aa12.64□□□□□ -0.39
ERCC6-210ENST00000623115 DAPK1P53355 1430 aa12.63□□□□□ -0.39
ERCC6-210ENST00000623115 CARD11Q9BXL7 1154 aa12.63□□□□□ -0.39
ERCC6-210ENST00000623115 DNAJC5BQ9UF47 199 aa12.63□□□□□ -0.39
ERCC6-210ENST00000623115 ABCC5O15440 1437 aa12.62□□□□□ -0.39
ERCC6-210ENST00000623115 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
ERCC6-210ENST00000623115 TEX14Q8IWB6 1497 aa12.61□□□□□ -0.39
ERCC6-210ENST00000623115 KIF21AQ7Z4S6 1674 aa12.61□□□□□ -0.39
ERCC6-210ENST00000623115 BCORL1Q5H9F3 1711 aa12.61□□□□□ -0.39
ERCC6-210ENST00000623115 IQGAP2Q13576 1575 aa12.6□□□□□ -0.39
ERCC6-210ENST00000623115 WASHC2CQ9Y4E1 1318 aa12.6□□□□□ -0.39
ERCC6-210ENST00000623115 PKD2Q13563 968 aa12.6□□□□□ -0.39
ERCC6-210ENST00000623115 DCAF11Q8TEB1 546 aa12.59□□□□□ -0.39
ERCC6-210ENST00000623115 USP35Q9P2H5 1018 aa12.58□□□□□ -0.4
ERCC6-210ENST00000623115 WDR62O43379 1518 aa12.57□□□□□ -0.4
ERCC6-210ENST00000623115 CFDP1Q9UEE9 299 aaPredicted RBP12.57□□□□□ -0.4
ERCC6-210ENST00000623115 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
ERCC6-210ENST00000623115 RGL3Q3MIN7 710 aa12.56□□□□□ -0.4
ERCC6-210ENST00000623115 SLKQ9H2G2 1235 aaPredicted RBP12.55□□□□□ -0.4
ERCC6-210ENST00000623115 MYBBP1AQ9BQG0 1328 aaKnown RBP12.54□□□□□ -0.4
ERCC6-210ENST00000623115 DNMT1P26358 1616 aaKnown RBP12.53□□□□□ -0.4
ERCC6-210ENST00000623115 PZPP20742 1482 aa12.52□□□□□ -0.4
ERCC6-210ENST00000623115 SPRYD3Q8NCJ5 442 aa12.52□□□□□ -0.4
ERCC6-210ENST00000623115 UBE2Q2Q8WVN8 375 aa12.52□□□□□ -0.4
ERCC6-210ENST00000623115 ARID4BQ4LE39 1312 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms