RNA–Protein interactions for RNA: ENST00000623115.3

ERCC6-210, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2

Gene ERCC6, Length 2,932 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-210ENST00000623115 NISCHQ9Y2I1 1504 aa18.48■□□□□ 0.55
ERCC6-210ENST00000623115 SHROOM4Q9ULL8 1493 aa16.45■□□□□ 0.22
ERCC6-210ENST00000623115 SUPT5HO00267 1087 aaKnown RBP16.35■□□□□ 0.21
ERCC6-210ENST00000623115 PPARGC1BQ86YN6 1023 aaKnown RBP16.16■□□□□ 0.18
ERCC6-210ENST00000623115 HRCP23327 699 aa16.1■□□□□ 0.17
ERCC6-210ENST00000623115 PCGF6Q9BYE7 350 aa16.1■□□□□ 0.17
ERCC6-210ENST00000623115 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
ERCC6-210ENST00000623115 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
ERCC6-210ENST00000623115 LOC105371045A0A1W2PR82 267 aa15.66■□□□□ 0.1
ERCC6-210ENST00000623115 DCAF8L2P0C7V8 631 aa15.65■□□□□ 0.1
ERCC6-210ENST00000623115 ZCCHC6Q5VYS8 1495 aaKnown RBP15.64■□□□□ 0.09
ERCC6-210ENST00000623115 CCDC180Q9P1Z9 1646 aa15.48■□□□□ 0.07
ERCC6-210ENST00000623115 EHMT2Q96KQ7 1210 aa15.41■□□□□ 0.06
ERCC6-210ENST00000623115 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
ERCC6-210ENST00000623115 TRIM26Q12899 539 aaPredicted RBP15.29■□□□□ 0.04
ERCC6-210ENST00000623115 FAM9AQ8IZU1 332 aaPredicted RBP15.23■□□□□ 0.03
ERCC6-210ENST00000623115 DCAF1Q9Y4B6 1507 aa15.18■□□□□ 0.02
ERCC6-210ENST00000623115 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
ERCC6-210ENST00000623115 NEUROD1Q13562 356 aa14.98□□□□□ -0.01
ERCC6-210ENST00000623115 TTBK1Q5TCY1 1321 aaPredicted RBP14.97□□□□□ -0.01
ERCC6-210ENST00000623115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.96□□□□□ -0.01
ERCC6-210ENST00000623115 ZEB1P37275 1124 aaPredicted RBP14.96□□□□□ -0.01
ERCC6-210ENST00000623115 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
ERCC6-210ENST00000623115 GTF3C3Q9Y5Q9 886 aa14.91□□□□□ -0.02
ERCC6-210ENST00000623115 ACIN1Q9UKV3 1341 aaKnown RBP14.87□□□□□ -0.03
ERCC6-210ENST00000623115 CCER1Q8TC90 406 aaPredicted RBP14.82□□□□□ -0.04
ERCC6-210ENST00000623115 YTHDC1Q96MU7 727 aaKnown RBP14.79□□□□□ -0.04
ERCC6-210ENST00000623115 ABCC9O60706 1549 aa14.77□□□□□ -0.05
ERCC6-210ENST00000623115 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
ERCC6-210ENST00000623115 DIEXFQ68CQ4 756 aaKnown RBP14.74□□□□□ -0.05
ERCC6-210ENST00000623115 SCRIBQ14160 1630 aa14.68□□□□□ -0.06
ERCC6-210ENST00000623115 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
ERCC6-210ENST00000623115 CENPBP07199 599 aaPredicted RBP14.64□□□□□ -0.07
ERCC6-210ENST00000623115 RB1CC1Q8TDY2 1594 aa14.58□□□□□ -0.08
ERCC6-210ENST00000623115 CECR2Q9BXF3 1484 aa14.46□□□□□ -0.1
ERCC6-210ENST00000623115 MIER1Q8N108 512 aa14.43□□□□□ -0.1
ERCC6-210ENST00000623115 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
ERCC6-210ENST00000623115 MYT1Q01538 1121 aa14.39□□□□□ -0.11
ERCC6-210ENST00000623115 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
ERCC6-210ENST00000623115 HNRNPUL2Q1KMD3 747 aaKnown RBP14.35□□□□□ -0.11
ERCC6-210ENST00000623115 NACADO15069 1562 aa14.34□□□□□ -0.11
ERCC6-210ENST00000623115 WIZO95785 1651 aa14.31□□□□□ -0.12
ERCC6-210ENST00000623115 RANGAP1P46060 587 aaPredicted RBP14.28□□□□□ -0.12
ERCC6-210ENST00000623115 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
ERCC6-210ENST00000623115 BAZ1AQ9NRL2 1556 aaPredicted RBP14.19□□□□□ -0.14
ERCC6-210ENST00000623115 CEP162Q5TB80 1403 aa14.14□□□□□ -0.15
ERCC6-210ENST00000623115 BCANQ96GW7 911 aa14.13□□□□□ -0.15
ERCC6-210ENST00000623115 CCDC88BA6NC98 1476 aa14.13□□□□□ -0.15
ERCC6-210ENST00000623115 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
ERCC6-210ENST00000623115 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
ERCC6-210ENST00000623115 SUPT16HQ9Y5B9 1047 aaKnown RBP14.1□□□□□ -0.15
ERCC6-210ENST00000623115 SOGA1O94964 1423 aa14.1□□□□□ -0.15
ERCC6-210ENST00000623115 WRNQ14191 1432 aaPredicted RBP eCLIP14.1□□□□□ -0.15
ERCC6-210ENST00000623115 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
ERCC6-210ENST00000623115 TNIKQ9UKE5 1360 aa14.06□□□□□ -0.16
ERCC6-210ENST00000623115 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
ERCC6-210ENST00000623115 RUSC2Q8N2Y8 1516 aa14.05□□□□□ -0.16
ERCC6-210ENST00000623115 KCNH8Q96L42 1107 aa14.03□□□□□ -0.16
ERCC6-210ENST00000623115 TSHZ2Q9NRE2 1034 aa14.02□□□□□ -0.17
ERCC6-210ENST00000623115 SMARCA2P51531 1590 aa14□□□□□ -0.17
ERCC6-210ENST00000623115 SMARCA4P51532 1647 aa13.99□□□□□ -0.17
ERCC6-210ENST00000623115 EEA1Q15075 1411 aa13.97□□□□□ -0.17
ERCC6-210ENST00000623115 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
ERCC6-210ENST00000623115 ANP32EQ9BTT0 268 aa13.94□□□□□ -0.18
ERCC6-210ENST00000623115 APLP2Q06481 763 aa13.92□□□□□ -0.18
ERCC6-210ENST00000623115 ITGAEP38570 1179 aa13.91□□□□□ -0.18
ERCC6-210ENST00000623115 GOLGA3Q08378 1498 aa13.91□□□□□ -0.18
ERCC6-210ENST00000623115 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
ERCC6-210ENST00000623115 FKBP8Q14318 412 aa13.85□□□□□ -0.19
ERCC6-210ENST00000623115 HIRIP3Q9BW71 556 aaPredicted RBP13.82□□□□□ -0.2
ERCC6-210ENST00000623115 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
ERCC6-210ENST00000623115 CLIP1P30622 1438 aa13.8□□□□□ -0.2
ERCC6-210ENST00000623115 UNC13AQ9UPW8 1703 aa13.79□□□□□ -0.2
ERCC6-210ENST00000623115 TRIM52Q96A61 297 aa13.77□□□□□ -0.2
ERCC6-210ENST00000623115 DDX10Q13206 875 aaKnown RBP13.75□□□□□ -0.21
ERCC6-210ENST00000623115 AEBP2Q6ZN18 517 aaPredicted RBP13.75□□□□□ -0.21
ERCC6-210ENST00000623115 VPS8Q8N3P4 1428 aa13.74□□□□□ -0.21
ERCC6-210ENST00000623115 KANK4Q5T7N3 995 aaPredicted RBP13.74□□□□□ -0.21
ERCC6-210ENST00000623115 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
ERCC6-210ENST00000623115 SYNJ1O43426 1573 aa13.73□□□□□ -0.21
ERCC6-210ENST00000623115 KIF21BO75037 1637 aa13.71□□□□□ -0.21
ERCC6-210ENST00000623115 RBM19Q9Y4C8 960 aaKnown RBP13.71□□□□□ -0.21
ERCC6-210ENST00000623115 IRX6P78412 446 aaPredicted RBP13.7□□□□□ -0.22
ERCC6-210ENST00000623115 RAPGEF2Q9Y4G8 1499 aa13.69□□□□□ -0.22
ERCC6-210ENST00000623115 PEG3Q9GZU2 1588 aa13.67□□□□□ -0.22
ERCC6-210ENST00000623115 BICRAQ9NZM4 1560 aa13.67□□□□□ -0.22
ERCC6-210ENST00000623115 BAZ1BQ9UIG0 1483 aaKnown RBP13.66□□□□□ -0.22
ERCC6-210ENST00000623115 SIN3AQ96ST3 1273 aa13.63□□□□□ -0.23
ERCC6-210ENST00000623115 ATAD2BQ9ULI0 1458 aa13.63□□□□□ -0.23
ERCC6-210ENST00000623115 CLSPNQ9HAW4 1339 aa13.62□□□□□ -0.23
ERCC6-210ENST00000623115 MSH5O43196 834 aa13.62□□□□□ -0.23
ERCC6-210ENST00000623115 NEFLP07196 543 aa13.62□□□□□ -0.23
ERCC6-210ENST00000623115 TOP2BQ02880 1626 aa13.52□□□□□ -0.25
ERCC6-210ENST00000623115 ERICH6Q7L0X2 663 aa13.51□□□□□ -0.25
ERCC6-210ENST00000623115 ATP1B4Q9UN42 357 aaPredicted RBP13.51□□□□□ -0.25
ERCC6-210ENST00000623115 PRXQ9BXM0 1461 aa13.5□□□□□ -0.25
ERCC6-210ENST00000623115 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
ERCC6-210ENST00000623115 FAM50AQ14320 339 aaKnown RBP13.49□□□□□ -0.25
ERCC6-210ENST00000623115 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
ERCC6-210ENST00000623115 RAB3GAP2Q9H2M9 1393 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms