RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ANKLE2Q86XL3 938 aa14.48□□□□□ -0.09
POLR2A-209ENST00000617998 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.48□□□□□ -0.09
POLR2A-209ENST00000617998 IFT140Q96RY7 1462 aa14.48□□□□□ -0.09
POLR2A-209ENST00000617998 NCAPD3P42695 1498 aa14.47□□□□□ -0.09
POLR2A-209ENST00000617998 PRG4Q92954 1404 aaPredicted RBP14.47□□□□□ -0.09
POLR2A-209ENST00000617998 UBAP1LF5GYI3 381 aa14.47□□□□□ -0.09
POLR2A-209ENST00000617998 NESP48681 1621 aa14.47□□□□□ -0.09
POLR2A-209ENST00000617998 ISY1Q9ULR0 285 aaKnown RBP14.46□□□□□ -0.09
POLR2A-209ENST00000617998 LTV1Q96GA3 475 aaPredicted RBP14.46□□□□□ -0.09
POLR2A-209ENST00000617998 ANKRD30AQ9BXX3 1397 aa14.46□□□□□ -0.09
POLR2A-209ENST00000617998 TNIKQ9UKE5 1360 aa14.46□□□□□ -0.09
POLR2A-209ENST00000617998 AMPHP49418 695 aa14.46□□□□□ -0.1
POLR2A-209ENST00000617998 PNNQ9H307 717 aaKnown RBP14.44□□□□□ -0.1
POLR2A-209ENST00000617998 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
POLR2A-209ENST00000617998 TXNDC2Q86VQ3 553 aa14.44□□□□□ -0.1
POLR2A-209ENST00000617998 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
POLR2A-209ENST00000617998 TULP1O00294 542 aaPredicted RBP14.41□□□□□ -0.1
POLR2A-209ENST00000617998 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
POLR2A-209ENST00000617998 RAPGEF2Q9Y4G8 1499 aa14.41□□□□□ -0.1
POLR2A-209ENST00000617998 RAD54L2Q9Y4B4 1467 aa14.41□□□□□ -0.1
POLR2A-209ENST00000617998 TOM1O60784 492 aa14.41□□□□□ -0.1
POLR2A-209ENST00000617998 CCDC18Q5T9S5 1454 aa14.4□□□□□ -0.1
POLR2A-209ENST00000617998 NUP155O75694 1391 aa14.4□□□□□ -0.1
POLR2A-209ENST00000617998 VGFO15240 615 aaPredicted RBP14.4□□□□□ -0.1
POLR2A-209ENST00000617998 PKD2Q13563 968 aa14.39□□□□□ -0.11
POLR2A-209ENST00000617998 TMF1P82094 1093 aa14.37□□□□□ -0.11
POLR2A-209ENST00000617998 OS9Q13438 667 aaPredicted RBP14.36□□□□□ -0.11
POLR2A-209ENST00000617998 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
POLR2A-209ENST00000617998 USP35Q9P2H5 1018 aa14.36□□□□□ -0.11
POLR2A-209ENST00000617998 NEUROD2Q15784 382 aa14.35□□□□□ -0.11
POLR2A-209ENST00000617998 TERF2IPQ9NYB0 399 aa14.35□□□□□ -0.11
POLR2A-209ENST00000617998 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.35□□□□□ -0.11
POLR2A-209ENST00000617998 FAM9BQ8IZU0 186 aa14.35□□□□□ -0.11
POLR2A-209ENST00000617998 MORC1Q86VD1 984 aa14.34□□□□□ -0.11
POLR2A-209ENST00000617998 PDE3BQ13370 1112 aa14.33□□□□□ -0.12
POLR2A-209ENST00000617998 CEP162Q5TB80 1403 aa14.33□□□□□ -0.12
POLR2A-209ENST00000617998 RAPGEF3O95398 923 aa14.33□□□□□ -0.12
POLR2A-209ENST00000617998 WASHC2AQ641Q2 1341 aa14.33□□□□□ -0.12
POLR2A-209ENST00000617998 WIZO95785 1651 aa14.33□□□□□ -0.12
POLR2A-209ENST00000617998 ESCO1Q5FWF5 840 aa14.32□□□□□ -0.12
POLR2A-209ENST00000617998 FHOD3Q2V2M9 1422 aa14.32□□□□□ -0.12
POLR2A-209ENST00000617998 CDK11BP21127 795 aaKnown RBP14.31□□□□□ -0.12
POLR2A-209ENST00000617998 STRN4Q9NRL3 753 aa14.31□□□□□ -0.12
POLR2A-209ENST00000617998 NGLY1Q96IV0 654 aa14.3□□□□□ -0.12
POLR2A-209ENST00000617998 HRCP23327 699 aa14.3□□□□□ -0.12
POLR2A-209ENST00000617998 TAF7LQ5H9L4 462 aa14.3□□□□□ -0.12
POLR2A-209ENST00000617998 ARHGAP35Q9NRY4 1499 aa14.29□□□□□ -0.12
POLR2A-209ENST00000617998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.29□□□□□ -0.12
POLR2A-209ENST00000617998 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
POLR2A-209ENST00000617998 CWC22Q9HCG8 908 aaKnown RBP14.28□□□□□ -0.12
POLR2A-209ENST00000617998 SNAPC4Q5SXM2 1469 aa14.28□□□□□ -0.12
POLR2A-209ENST00000617998 PPP6R1Q9UPN7 881 aa14.28□□□□□ -0.12
POLR2A-209ENST00000617998 TRAK1Q9UPV9 953 aa14.28□□□□□ -0.12
POLR2A-209ENST00000617998 FRAT2O75474 233 aaPredicted RBP14.27□□□□□ -0.12
POLR2A-209ENST00000617998 HMGB2P26583 209 aaKnown RBP14.27□□□□□ -0.12
POLR2A-209ENST00000617998 GPRASP1Q5JY77 1395 aa14.27□□□□□ -0.13
POLR2A-209ENST00000617998 CHMP4AQ9BY43 222 aa14.26□□□□□ -0.13
POLR2A-209ENST00000617998 HSP90AA1P07900 732 aaKnown RBP14.25□□□□□ -0.13
POLR2A-209ENST00000617998 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
POLR2A-209ENST00000617998 EIF3AQ14152 1382 aaKnown RBP14.25□□□□□ -0.13
POLR2A-209ENST00000617998 ADAMTS2O95450 1211 aa14.24□□□□□ -0.13
POLR2A-209ENST00000617998 AFAP1Q8N556 730 aa14.23□□□□□ -0.13
POLR2A-209ENST00000617998 NLRP2Q9NX02 1062 aa14.23□□□□□ -0.13
POLR2A-209ENST00000617998 CHMP3Q9Y3E7 222 aa14.23□□□□□ -0.13
POLR2A-209ENST00000617998 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
POLR2A-209ENST00000617998 DIEXFQ68CQ4 756 aaKnown RBP14.23□□□□□ -0.13
POLR2A-209ENST00000617998 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
POLR2A-209ENST00000617998 TTC5Q8N0Z6 440 aa14.22□□□□□ -0.13
POLR2A-209ENST00000617998 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
POLR2A-209ENST00000617998 MINK1Q8N4C8 1332 aaPredicted RBP14.22□□□□□ -0.13
POLR2A-209ENST00000617998 CC2D1BQ5T0F9 858 aaKnown RBP14.21□□□□□ -0.13
POLR2A-209ENST00000617998 UACAQ9BZF9 1416 aa14.21□□□□□ -0.13
POLR2A-209ENST00000617998 RAPGEF4Q8WZA2 1011 aa14.21□□□□□ -0.13
POLR2A-209ENST00000617998 MRS2Q9HD23 443 aa14.2□□□□□ -0.14
POLR2A-209ENST00000617998 FBXW7Q969H0 707 aa14.2□□□□□ -0.14
POLR2A-209ENST00000617998 COG3Q96JB2 828 aa14.2□□□□□ -0.14
POLR2A-209ENST00000617998 HIRIP3Q9BW71 556 aaPredicted RBP14.19□□□□□ -0.14
POLR2A-209ENST00000617998 CD109Q6YHK3 1445 aa14.19□□□□□ -0.14
POLR2A-209ENST00000617998 ARHGAP5Q13017 1502 aa14.19□□□□□ -0.14
POLR2A-209ENST00000617998 TAOK2Q9UL54 1235 aa14.18□□□□□ -0.14
POLR2A-209ENST00000617998 GORABQ5T7V8 394 aa14.17□□□□□ -0.14
POLR2A-209ENST00000617998 PAXIP1Q6ZW49 1069 aaPredicted RBP14.17□□□□□ -0.14
POLR2A-209ENST00000617998 FTSJ3Q8IY81 847 aaKnown RBP14.17□□□□□ -0.14
POLR2A-209ENST00000617998 NUTM2GQ5VZR2 741 aa14.16□□□□□ -0.14
POLR2A-209ENST00000617998 SLC26A8Q96RN1 970 aa14.16□□□□□ -0.14
POLR2A-209ENST00000617998 UPF2Q9HAU5 1272 aaKnown RBP14.16□□□□□ -0.14
POLR2A-209ENST00000617998 PRDM11Q9NQV5 511 aa14.16□□□□□ -0.14
POLR2A-209ENST00000617998 CEBPAP49715 358 aaPredicted RBP14.14□□□□□ -0.15
POLR2A-209ENST00000617998 CLSTN1O94985 981 aa14.14□□□□□ -0.15
POLR2A-209ENST00000617998 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
POLR2A-209ENST00000617998 TOM1L2Q6ZVM7 507 aa14.14□□□□□ -0.15
POLR2A-209ENST00000617998 SYNJ1O43426 1573 aa14.14□□□□□ -0.15
POLR2A-209ENST00000617998 TRIM34Q9BYJ4 488 aa14.14□□□□□ -0.15
POLR2A-209ENST00000617998 HSPA2P54652 639 aa14.13□□□□□ -0.15
POLR2A-209ENST00000617998 TEFQ10587 303 aa14.13□□□□□ -0.15
POLR2A-209ENST00000617998 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
POLR2A-209ENST00000617998 ROCK2O75116 1388 aaKnown RBP14.13□□□□□ -0.15
POLR2A-209ENST00000617998 CTDP1Q9Y5B0 961 aaPredicted RBP14.12□□□□□ -0.15
POLR2A-209ENST00000617998 LMTK3Q96Q04 1460 aa14.12□□□□□ -0.15
POLR2A-209ENST00000617998 SCAPERQ9BY12 1400 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms